Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27e02
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 71 9e-13
11_01_0557 + 4394754-4396040 67 9e-12
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 67 1e-11
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 62 3e-10
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 59 3e-09
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 53 2e-07
12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106 48 8e-06
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 37 0.014
05_03_0227 + 10655204-10655269,10656333-10656393,10656570-106566... 33 0.13
11_06_0291 + 22008412-22012284 30 1.6
06_03_1218 - 28488661-28488757,28488924-28488988,28489352-284894... 29 3.7
02_05_0948 - 33003921-33006269 29 3.7
11_02_0063 + 7916048-7917135,7917225-7918690,7920177-7920238,792... 28 5.0
06_03_1357 + 29543922-29545058,29545632-29545784,29545904-29546050 27 8.7
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 27 8.7
04_03_0892 + 20596107-20596682,20597219-20597251,20597794-205978... 27 8.7
02_02_0166 - 7345920-7346137,7346549-7346687 27 8.7
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 70.5 bits (165), Expect = 9e-13
Identities = 43/131 (32%), Positives = 65/131 (49%)
Frame = +2
Query: 167 VQMICMSFCMIALYMARSSLGVAILAMTDVSRKNDTNVEVYNWDKKTQGLILSSFFWGYM 346
V ++C F + M R ++ +AIL M+ + W T GLI SSFFWGY+
Sbjct: 184 VVLLCF-FSFLLCNMDRVNMSIAILPMSSE----------FGWSPATVGLIQSSFFWGYL 232
Query: 347 TMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLF 526
QI G+ A ++GGK +L ++ VL P A + G P + + R MG+ +
Sbjct: 233 LTQILGGIWADRFGGKVVLGFGVVWWSIATVLTPLAAKI-GLPFLLVMRAFMGIGEGVAM 291
Query: 527 PASHTLLGKMV 559
PA + +L K V
Sbjct: 292 PAMNNILSKWV 302
>11_01_0557 + 4394754-4396040
Length = 428
Score = 67.3 bits (157), Expect = 9e-12
Identities = 39/136 (28%), Positives = 68/136 (50%)
Frame = +2
Query: 152 FGIRHVQMICMSFCMIALYMARSSLGVAILAMTDVSRKNDTNVEVYNWDKKTQGLILSSF 331
F R+ ++ C Y+ R +A D N N +G+ILS F
Sbjct: 3 FPKRYAIVLLTFMCTNVCYIERVGFSIAYTVAADAVGTNQAN----------KGMILSMF 52
Query: 332 FWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLT 511
++GY+ QIP G A++ GG+ +LL++ + S+C ++P ++ L R+L+G+
Sbjct: 53 YYGYVLSQIPGGWAAQRLGGRLVLLLSFVLWSSICAVVP--LDPNRVILLVLSRLLVGVA 110
Query: 512 QACLFPASHTLLGKMV 559
Q +FP+ HT+L + V
Sbjct: 111 QGLIFPSIHTVLAQWV 126
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/91 (37%), Positives = 48/91 (52%)
Frame = +2
Query: 287 YNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLG 466
+ W+ +T GLI SSFFWGY+ QI G+ A GGK +L ++ L P A L
Sbjct: 151 FGWNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVIWWSIATALTPFAAKL- 209
Query: 467 GWPMICLCRVLMGLTQACLFPASHTLLGKMV 559
G P + + R MG+ + PA + +L K V
Sbjct: 210 GLPFLLVTRAFMGVGEGVAMPAMNNILSKWV 240
>09_06_0242 -
21806370-21806483,21806574-21806660,21806865-21806917,
21806999-21807140,21807406-21807501,21808617-21808785,
21808859-21808939,21809032-21809106,21810322-21810387,
21811013-21811158,21811898-21812344
Length = 491
Score = 62.1 bits (144), Expect = 3e-10
Identities = 34/103 (33%), Positives = 52/103 (50%)
Frame = +2
Query: 149 GFGIRHVQMICMSFCMIALYMARSSLGVAILAMTDVSRKNDTNVEVYNWDKKTQGLILSS 328
G R+ + S + M + +L VAI+ M+ Y W+ T GL+ SS
Sbjct: 127 GLAERYKLIGATSLAFVICNMDKVNLSVAIIPMS----------HQYGWNSSTAGLVQSS 176
Query: 329 FFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVA 457
FFWGY Q+P G LAK +GG+ +L + ++A ++P VA
Sbjct: 177 FFWGYALSQLPGGWLAKLFGGRRVLEIGVVAWSLATAIIPAVA 219
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/89 (35%), Positives = 42/89 (47%)
Frame = +2
Query: 287 YNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLG 466
Y W G++ SSF WGY+ + G LA +YGGK ++ A A SL L A+
Sbjct: 154 YGWSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAGA-AALWSLATFLTPWAASQ 212
Query: 467 GWPMICLCRVLMGLTQACLFPASHTLLGK 553
M+ R L GL + FP T L K
Sbjct: 213 STIMLLAIRALFGLAEGVAFPTMSTFLPK 241
>01_06_1363 -
36681605-36681789,36681875-36681908,36682017-36682154,
36682578-36682724,36682821-36682865,36683043-36683331,
36683443-36683669,36684109-36684528
Length = 494
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/89 (28%), Positives = 41/89 (46%)
Frame = +2
Query: 281 EVYNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVAS 460
+ Y W G++ SSF WGY+ I G L YGGK ++ + L P A+
Sbjct: 127 QAYGWTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAYGVALWSLATFLSPWAAA 186
Query: 461 LGGWPMICLCRVLMGLTQACLFPASHTLL 547
W + RVL+G+ + P+ + ++
Sbjct: 187 RSLW-LFLSTRVLLGMAEGVALPSMNNMV 214
>12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106
Length = 427
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/101 (28%), Positives = 54/101 (53%)
Frame = +2
Query: 257 SRKNDTNVEVYNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLC 436
SR+ ++ V + +K L++S G +IP G A++ GG+ +LL++ + +C
Sbjct: 25 SRRAPADLSVPRYGRKRGRLMVSP---GEYLWEIPGGWAAQRIGGRRVLLLSFVLWSLIC 81
Query: 437 VLLPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLGKMV 559
L+P ++ L R+ +G+ Q +FPA HT+L + V
Sbjct: 82 GLIPLDPKRE--VILVLSRLFVGVAQGFIFPAIHTVLAQWV 120
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +2
Query: 311 GLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLC 490
G + +S+ +G + G++A KYG KPI+++ L+ S+ + + M
Sbjct: 139 GFVGASYMFGRALSSVIWGIVADKYGRKPIIIITLI---SIIIFNTLFGLSSSYWMALTS 195
Query: 491 RVLMGLTQACLFPASHTLL 547
R L+GL L P H L
Sbjct: 196 RGLLGLMCGILGPIKHYFL 214
>05_03_0227 +
10655204-10655269,10656333-10656393,10656570-10656672,
10656768-10656870,10656951-10657004,10657124-10657186,
10657884-10658105,10658249-10658336,10658561-10658646,
10659003-10659110,10659201-10659245,10659511-10659601,
10659662-10659765
Length = 397
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 311 GLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLA 421
G + +S+F +P G+ A KYG KP +++++L+
Sbjct: 40 GFVAASYFLARTFSSVPWGIFADKYGRKPCIVISILS 76
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 121 KTQCFC*EIRLRHSSCTDDMHVFLHDSF 204
K QC +RLRH SCT+ M +F D F
Sbjct: 1188 KLQC----VRLRHISCTESMLIFKKDDF 1211
>06_03_1218 -
28488661-28488757,28488924-28488988,28489352-28489448,
28489647-28489852,28489853-28490152
Length = 254
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 132 TLSLPGSLRNILANFFSSTIFLSEPKIIK 46
+LSLP + NI +NFF TI +S +++K
Sbjct: 94 SLSLPLQVMNISSNFFHRTISISSTEMMK 122
>02_05_0948 - 33003921-33006269
Length = 782
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 475 DDMPLSSTHGLNASLPLSSQSHAPGEDGYQQTNVLPWL 588
D + + S H ++ + +S+ + G Y TN+ PW+
Sbjct: 307 DSIAIGSFHAVSKGIVVSASAGNSGPGEYTATNIAPWI 344
>11_02_0063 + 7916048-7917135,7917225-7918690,7920177-7920238,
7921808-7922407
Length = 1071
Score = 28.3 bits (60), Expect = 5.0
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +2
Query: 116 PGRLSVSAKKFGFGIRHVQMICMSFCMIALYMARSSLGVAILAMTDVSRKNDTNVEVYNW 295
PG S A GF I + + SF + SSL VA + + ++R D + ++
Sbjct: 939 PGGYSSDAGNLGFPIMARKFVFQSFLIADTLAMCSSLVVAFICI--IARWEDLQF-LLHY 995
Query: 296 DKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVAS-LGGW 472
T+ L+ F + T+ GL P LL + L VLLP + +G W
Sbjct: 996 RSFTKKLMW--FAYMATTVAFATGLYTVL---APRLLWLAIGICLLSVLLPAITKVIGEW 1050
Query: 473 PMICLCRVLMGLT 511
P++ L R +G T
Sbjct: 1051 PVLKL-RFRLGKT 1062
>06_03_1357 + 29543922-29545058,29545632-29545784,29545904-29546050
Length = 478
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -1
Query: 147 NFLAETLSLPGSLRNILANFFSSTIFLSEPKIIKWNFTFRHHCQTGN 7
N L +T G L + F +P I WN R HC+ GN
Sbjct: 230 NGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGN 276
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 468 PPKLATVGNSTQSDPFANNATSSIGFPP 385
PP G + P A +AT S+GF P
Sbjct: 679 PPAAPASGGGDAAAPLAKSATKSVGFAP 706
>04_03_0892 +
20596107-20596682,20597219-20597251,20597794-20597881,
20597966-20598447,20598545-20598811,20598881-20599230,
20599330-20599861
Length = 775
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 57 KIIKWNFTFRHHCQTGNEI 1
+++ F HHC TGNEI
Sbjct: 721 EVVDGGLAFAHHCLTGNEI 739
>02_02_0166 - 7345920-7346137,7346549-7346687
Length = 118
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 169 TDDMHVFLHDSFVHGAQQSWSRDSGHDRC 255
T+D L +S G++++W GHDRC
Sbjct: 77 TNDNGSTLENSRGVGSEEAWRDSEGHDRC 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,969,991
Number of Sequences: 37544
Number of extensions: 383982
Number of successful extensions: 1087
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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