Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27d24
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein. 279 9e-75
BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein. 279 9e-75
AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens ... 279 9e-75
AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein. 279 9e-75
AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein. 277 3e-74
BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein. 239 5e-63
AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens ... 32 2.1
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein. 32 2.1
D32257-1|BAA06988.1| 423|Homo sapiens Xenopus transcription fac... 31 3.7
BC130605-1|AAI30606.1| 110|Homo sapiens late cornified envelope... 31 3.7
BC130603-1|AAI30604.1| 110|Homo sapiens late cornified envelope... 31 3.7
AL139247-4|CAI21682.1| 110|Homo sapiens late cornified envelope... 31 3.7
BC013882-1|AAH13882.2| 583|Homo sapiens EYA2 protein protein. 31 4.9
EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel prot... 30 8.6
EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel prot... 30 8.6
DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ... 30 8.6
AL353708-1|CAI41049.1| 671|Homo sapiens torsin A interacting pr... 30 8.6
AF023456-1|AAB82796.1| 753|Homo sapiens protein phosphatase wit... 30 8.6
>BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 279 bits (683), Expect = 9e-75
Identities = 133/200 (66%), Positives = 155/200 (77%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 SKFAKAYSEGVHKSKYWEYV 673
S FA+AY++G+ ++KYWE +
Sbjct: 179 SNFARAYAQGISRTKYWELI 198
>BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein.
Length = 466
Score = 279 bits (683), Expect = 9e-75
Identities = 133/200 (66%), Positives = 155/200 (77%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 SKFAKAYSEGVHKSKYWEYV 673
S FA+AY++G+ ++KYWE +
Sbjct: 179 SNFARAYAQGISRTKYWELI 198
>AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ90475 fis, clone NT2RP3002721, highly similar to
Porcine citrate synthase mRNA. ).
Length = 466
Score = 279 bits (683), Expect = 9e-75
Identities = 133/200 (66%), Positives = 155/200 (77%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 SKFAKAYSEGVHKSKYWEYV 673
S FA+AY++G+ ++KYWE +
Sbjct: 179 SNFARAYAQGISRTKYWELI 198
>AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 279 bits (683), Expect = 9e-75
Identities = 133/200 (66%), Positives = 155/200 (77%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 SKFAKAYSEGVHKSKYWEYV 673
S FA+AY++G+ ++KYWE +
Sbjct: 179 SNFARAYAQGISRTKYWELI 198
>AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 277 bits (678), Expect = 3e-74
Identities = 133/200 (66%), Positives = 154/200 (77%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGCIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 SKFAKAYSEGVHKSKYWEYV 673
S FA+AY+ G+ ++KYWE +
Sbjct: 179 SNFAQAYARGISRTKYWELI 198
>BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein.
Length = 409
Score = 239 bits (586), Expect = 5e-63
Identities = 109/141 (77%), Positives = 123/141 (87%)
Frame = +2
Query: 251 TKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPE 430
T VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPE
Sbjct: 1 TVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPE 60
Query: 431 GLFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNS 610
GLFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNS
Sbjct: 61 GLFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNS 120
Query: 611 ESKFAKAYSEGVHKSKYWEYV 673
ES FA+AY++G+ ++KYWE +
Sbjct: 121 ESNFARAYAQGISRTKYWELI 141
>AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens
cDNA FLJ46675 fis, clone TRACH3009701, weakly similar
to Homo sapiens dynein, axonemal, heavy polypeptide 9
(DNAH9). ).
Length = 901
Score = 31.9 bits (69), Expect = 2.1
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 8 VCDRSRASCRDLCGSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSI 187
+ R + + LC +R+ L L+R+ + + + A L+ Q L+ +
Sbjct: 123 IIGRVSLAAKSLCMWVRAMELYGRLYRVVEPKRIRMNAALAQLREKQAALAEAQEKLREV 182
Query: 188 LQ--EKIPKE-QEKI---REFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEG 349
+ E + K+ EK+ E RKK ++ M+ G+ G K WE +V +E
Sbjct: 183 AEKLEMLKKQYDEKLAQKEELRKKSEEMELKLERAGMLVSGLAGEKAR-WEETVQGLEED 241
Query: 350 IRF 358
+ +
Sbjct: 242 LGY 244
>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
Length = 4464
Score = 31.9 bits (69), Expect = 2.1
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 8 VCDRSRASCRDLCGSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSI 187
+ R + + LC +R+ L L+R+ + + + A L+ Q L+ +
Sbjct: 3222 IIGRVSLAAKSLCMWVRAMELYGRLYRVVEPKRIRMNAALAQLREKQAALAEAQEKLREV 3281
Query: 188 LQ--EKIPKE-QEKI---REFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEG 349
+ E + K+ EK+ E RKK ++ M+ G+ G K WE +V +E
Sbjct: 3282 AEKLEMLKKQYDEKLAQKEELRKKSEEMELKLERAGMLVSGLAGEKAR-WEETVQGLEED 3340
Query: 350 IRF 358
+ +
Sbjct: 3341 LGY 3343
>D32257-1|BAA06988.1| 423|Homo sapiens Xenopus transcription factor
IIIA homologue protein.
Length = 423
Score = 31.1 bits (67), Expect = 3.7
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 399 RLRVEKNHYPKVFSGFSSLAIYPPKRKLKRCLKNGQRGRS 518
+L+V+K+ + F G SS IYPPKRK + L Q G S
Sbjct: 367 KLKVKKSREKREF-GLSSQWIYPPKRKQGQGLSLCQNGES 405
>BC130605-1|AAI30606.1| 110|Homo sapiens late cornified envelope 2D
protein.
Length = 110
Score = 31.1 bits (67), Expect = 3.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 537 QC*TICPANCIPCHSSRLPSPHSTVNLNSLKPTQRACTNPSIGSTC 674
+C CP C P + P+P S + P+ +C PS G C
Sbjct: 19 KCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPSSGGCC 64
>BC130603-1|AAI30604.1| 110|Homo sapiens late cornified envelope 2D
protein.
Length = 110
Score = 31.1 bits (67), Expect = 3.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 537 QC*TICPANCIPCHSSRLPSPHSTVNLNSLKPTQRACTNPSIGSTC 674
+C CP C P + P+P S + P+ +C PS G C
Sbjct: 19 KCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPSSGGCC 64
>AL139247-4|CAI21682.1| 110|Homo sapiens late cornified envelope 2D
protein.
Length = 110
Score = 31.1 bits (67), Expect = 3.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 537 QC*TICPANCIPCHSSRLPSPHSTVNLNSLKPTQRACTNPSIGSTC 674
+C CP C P + P+P S + P+ +C PS G C
Sbjct: 19 KCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPSSGGCC 64
>BC013882-1|AAH13882.2| 583|Homo sapiens EYA2 protein protein.
Length = 583
Score = 30.7 bits (66), Expect = 4.9
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 192 RKRFPRNKRRSANSERSMVPLKSERSQ--LI*CTVACVESKVWFGKPLCWMPMKESVS-V 362
R++ PR RR +R ++ RSQ L+ A ++ G+PL KE V V
Sbjct: 71 RRQQPRQPRRRRQRQRQRQQ-RARRSQPGLVGPAPARPPARTASGRPLHCARYKEMVELV 129
Query: 363 VYPSLSANSNC 395
+ PSL+ NS+C
Sbjct: 130 ISPSLTVNSDC 140
>EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel protein.
Length = 1998
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 383 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 502
QQ+ GG E P+ W V+ +EA+A A +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115
>EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel protein.
Length = 2016
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 383 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 502
QQ+ GG E P+ W V+ +EA+A A +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115
>DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein type
V alpha subunit protein.
Length = 2016
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 383 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 502
QQ+ GG E P+ W V+ +EA+A A +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115
>AL353708-1|CAI41049.1| 671|Homo sapiens torsin A interacting
protein 1 protein.
Length = 671
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
Frame = +3
Query: 561 NCIPCHSSRLPSP------HSTVNLNSLKPTQRA 644
NC+P HS P+P H NL S+KP+ R+
Sbjct: 47 NCLPDHSGHRPTPPRSHRHHRQENLGSIKPSSRS 80
>AF023456-1|AAB82796.1| 753|Homo sapiens protein phosphatase with
EF-hands-2 long form protein.
Length = 753
Score = 29.9 bits (64), Expect = 8.6
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 47 GSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIR 226
GS R A +K+ + K T T+ R E++ L+++ ++ + +
Sbjct: 516 GSNRGAYVKLGPALTPHIVQYQANKVTHTLTMRQRISRVEESALRALREKLFAHSSDLLS 575
Query: 227 EFRKKHGSTKVGEVTVDMMYGGMRGI--KGLVW 319
EF KKH + KVG +T+ + + GL W
Sbjct: 576 EF-KKHDADKVGLITLSDWAAAVESVLHLGLPW 607
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,429,413
Number of Sequences: 237096
Number of extensions: 2140712
Number of successful extensions: 6942
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6941
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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