Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27d02
(553 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 28 0.23
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 27 0.31
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 27 0.41
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 24 2.9
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 3.8
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 5.0
CR954257-9|CAJ14160.1| 573|Anopheles gambiae putative esterase ... 23 6.7
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 6.7
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 23 8.8
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 23 8.8
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 27.9 bits (59), Expect = 0.23
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 184 CDPWRYPRVDCAIVPASPTAGTTGGRLRDSRSYCVMHKAIIT 59
C P Y R+ VPA+ + TTGG S V + A+ T
Sbjct: 1857 CGPC-YQRISSMTVPATSSVSTTGGSSSTMVSSAVSNSAVAT 1897
Score = 22.6 bits (46), Expect = 8.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 174 HGSHPLPGTRSGLLAPPSVVLA 239
H PG RS L PPSV A
Sbjct: 1355 HSRFSTPGARSLPLTPPSVPYA 1376
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 27.5 bits (58), Expect = 0.31
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 5 TRVNFERNLHFINKNGLESDYCFMHHAVASAVPQP 109
TR NF R+L +N N ++ YC +A A+ +P
Sbjct: 887 TRYNFIRDL--VNNNVIQVQYCPSERMIADALTKP 919
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 27.1 bits (57), Expect = 0.41
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 184 CDPWRYPRVDCAIVPASPTAGTTGGRLRDSRSYCVMHKAIITFETI 47
C P Y R+ VPA+ + TTGG S V + + T + +
Sbjct: 1858 CGPC-YQRISSMTVPATSSVSTTGGSSSTMVSSAVSNSVVATGQAV 1902
Score = 22.6 bits (46), Expect = 8.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 174 HGSHPLPGTRSGLLAPPSVVLA 239
H PG RS L PPSV A
Sbjct: 1352 HSRFSTPGARSLPLTPPSVPYA 1373
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 24.2 bits (50), Expect = 2.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 287 RACLDPTLPYCNLGECSATP 346
R+ P P +LGECSA+P
Sbjct: 25 RSSKTPRSPPSDLGECSASP 44
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect = 3.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -1
Query: 133 PTAGTTGGRLRDSRSYCVMHKAIITFETIFIDKMQVSFE 17
P G G R C+++ A TFE + +D++ E
Sbjct: 482 PKPGKPPGDPSSFRPICLLNNAGKTFERLLLDRLNEHLE 520
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.4 bits (48), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 321 TSENAPLPPLKDVNRPLVHL*HRPLNIRYSNILE 422
TSE + + PL+D N L RP I + + LE
Sbjct: 202 TSEYSDISPLRDGNIAFSSLEGRPSAINFDHHLE 235
>CR954257-9|CAJ14160.1| 573|Anopheles gambiae putative esterase
protein.
Length = 573
Score = 23.0 bits (47), Expect = 6.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 136 RLEQWRSQPLDTSMD 180
R W+S+PLD S+D
Sbjct: 398 REHYWQSRPLDASLD 412
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.0 bits (47), Expect = 6.7
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = -2
Query: 384 ATDAPEAGSHPSAGVAEHSPRLQ*GRVGSRHALCIPPT 271
A P GSHP A + G G A+ PP+
Sbjct: 826 AAQQPPPGSHPGAQTQPQLSQHPPGASGRSSAVITPPS 863
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 22.6 bits (46), Expect = 8.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 433 CYIFSSMFEYRILSGRCYRC 374
CY + YR LS CY C
Sbjct: 302 CYYRFRLEWYRTLSKACYNC 321
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 22.6 bits (46), Expect = 8.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 215 CTTIGSTCLDCTTKQVCTKVGG 280
C +G CT++ C K GG
Sbjct: 688 CGVVGHMAKVCTSQPKCLKCGG 709
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,609
Number of Sequences: 2352
Number of extensions: 11294
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -