BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27d01
(636 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1698 + 28803971-28804534,28804614-28804696,28804780-288049... 44 1e-04
03_02_0909 - 12310460-12310759,12310882-12310989,12311099-123112... 43 2e-04
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 40 0.001
12_02_1155 + 26541137-26541142,26541244-26542623,26542730-265428... 40 0.002
12_02_1102 + 26088927-26090321 38 0.009
05_06_0042 - 25131962-25132149,25132261-25132345,25132750-251327... 38 0.009
01_06_1508 - 37847007-37847099,37847176-37847398,37847547-378477... 38 0.009
01_01_0750 + 5798607-5800142 36 0.036
12_01_1076 + 11184047-11184270,11186178-11186352,11186554-111866... 35 0.047
01_02_0047 + 10621234-10621422,10621512-10621574,10623049-106231... 35 0.047
09_04_0520 + 18286435-18287279,18287818-18288697 35 0.062
05_01_0268 - 2053420-2053539,2053636-2053710,2053805-2053867,205... 35 0.062
01_01_0938 + 7400843-7401522,7402192-7403065 35 0.062
10_08_0364 + 17217631-17217833,17218134-17218308,17218391-172184... 34 0.11
06_02_0007 - 10533689-10534565,10535054-10535946 34 0.11
06_01_0346 - 2499108-2499348,2499659-2499864,2499970-2500152,250... 34 0.11
02_05_0585 + 30155021-30155910,30156130-30157006 34 0.11
01_01_0620 - 4621291-4621379,4621722-4621803,4622238-4622282,462... 34 0.11
05_03_0086 + 8279518-8280320,8280923-8281844 33 0.14
02_05_0166 + 26412217-26413403,26413918-26414800 33 0.14
04_04_0696 + 27328043-27329259,27329887-27330757 33 0.19
12_02_1026 - 25478462-25479232,25479249-25479821 33 0.25
05_06_0063 + 25289117-25290643 33 0.25
07_03_0958 + 22881718-22881999,22882114-22883880 32 0.33
05_03_0565 - 15509949-15511304 32 0.33
08_02_1092 + 24267737-24268641,24269005-24269884 32 0.44
09_02_0104 - 4329068-4329926,4330967-4331811 31 0.58
07_03_1415 + 26410999-26411148,26411228-26411290,26412623-264126... 31 0.58
03_06_0070 + 31461372-31461467,31461581-31461823,31462486-314625... 31 0.58
03_05_0461 + 24549079-24550464 31 0.58
01_06_0780 - 31938064-31938127,31940191-31941743 31 0.58
10_01_0099 - 1202668-1203023,1203097-1206037 31 1.0
06_03_0701 - 23655762-23655857,23656067-23656141,23656245-236563... 31 1.0
06_02_0185 + 12774608-12775970,12776058-12776983 31 1.0
02_05_1213 - 34963971-34964658,34965030-34965270,34965347-349657... 31 1.0
07_03_1737 + 29137654-29137842,29137999-29138061,29138196-291382... 30 1.3
01_01_1155 + 9191249-9192439 30 1.3
01_01_0363 + 2850954-2853675,2853819-2854225 30 1.3
01_01_0361 + 2838979-2841745,2841897-2842285 30 1.3
10_08_0664 - 19677371-19677393,19678071-19678173,19678397-196784... 30 1.8
08_02_0813 + 21459776-21461128 30 1.8
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 30 1.8
03_05_0239 + 22244565-22245144,22245249-22245594,22246847-222468... 30 1.8
01_06_0872 + 32609792-32610178,32611262-32611387,32611477-326115... 30 1.8
11_01_0083 - 629885-631189 29 2.3
10_08_0512 + 18455454-18456121,18456214-18456318,18457493-184576... 29 2.3
09_04_0136 + 14972687-14973901 29 2.3
02_01_0457 - 3283759-3285240 29 2.3
01_01_0752 - 5808798-5810183 29 2.3
01_01_0647 - 4909311-4909412,4909538-4909610,4909930-4910047,491... 29 2.3
12_01_0084 - 678324-679643 29 3.1
09_04_0135 - 14954060-14954156,14955027-14956024 29 3.1
07_03_0767 - 21360999-21361157,21361185-21361274,21361413-213615... 29 3.1
05_02_0102 - 6616497-6616601,6616652-6617884 29 3.1
04_02_0004 - 8430902-8431210,8431295-8431445,8431542-8431830,843... 29 3.1
02_05_0609 - 30335054-30335374,30335491-30335870,30336102-303364... 29 3.1
12_02_0134 - 14071190-14071435,14071800-14071988,14072114-140721... 29 4.1
07_01_0363 - 2675951-2676049,2676146-2676279,2676362-2676395,267... 29 4.1
03_02_0094 - 5583932-5584036,5584137-5584200,5584305-5584387,558... 29 4.1
02_05_0500 - 29538409-29539283,29540306-29541641 29 4.1
01_05_0793 + 25278846-25279504,25279598-25279702,25280949-252810... 29 4.1
01_01_0691 - 5328169-5328228,5328300-5328488,5328611-5328768,532... 29 4.1
01_01_0115 - 856957-858055,858479-858538,858802-859583 29 4.1
11_06_0351 - 22577666-22577989,22578282-22578676,22578961-225793... 28 5.4
10_08_0603 - 19120434-19120538,19121209-19121310,19121430-191214... 28 5.4
09_02_0531 + 10312743-10313293,10314313-10315030 28 5.4
07_03_0762 + 21324550-21325414,21325606-21325746,21325993-213261... 28 5.4
05_05_0212 + 23297636-23297970,23298260-23298734 28 5.4
04_04_0111 - 22842337-22842648,22843008-22843402,22843732-228440... 28 5.4
03_06_0061 + 31352703-31353037,31353145-31353274,31353708-313539... 28 5.4
02_05_0499 - 29534462-29535315,29535871-29537221 28 5.4
02_02_0468 + 10633992-10634064,10635998-10636130,10636244-106363... 28 5.4
02_01_0581 - 4307182-4307358,4307387-4307461,4307559-4307621,430... 28 5.4
01_06_1186 + 35223272-35224723,35225536-35225610,35226245-352265... 28 5.4
01_06_0948 - 33242219-33242530,33242632-33242782,33242874-332431... 28 5.4
01_01_0114 - 851249-852372,852577-852740,852838-853568 28 5.4
08_02_0825 - 21570628-21570715,21571436-21571812,21572364-215727... 28 7.1
07_03_0765 - 21341872-21342198,21342482-21342635,21342716-213429... 28 7.1
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 28 7.1
06_01_0856 - 6495222-6495548,6496046-6496440,6496573-6496914,649... 28 7.1
05_03_0186 + 9365179-9365342,9367332-9367403,9368362-9368433,936... 28 7.1
02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203 28 7.1
01_07_0256 - 42328795-42329172,42330245-42330379,42330783-423310... 28 7.1
01_06_0677 - 31104736-31104897,31105046-31105234,31105313-311054... 28 7.1
10_08_0943 + 21728294-21728675,21728767-21728840,21729469-217304... 27 9.4
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 27 9.4
08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,602... 27 9.4
08_01_0678 + 5878291-5878461,5879722-5879984,5881658-5881729,588... 27 9.4
08_01_0500 + 4338111-4338195,4339910-4340042,4340116-4340187,434... 27 9.4
07_01_0105 - 798883-798942,799118-799186,799282-799345,799434-79... 27 9.4
06_01_1129 + 9326975-9327071,9327174-9327306,9327408-9327479,932... 27 9.4
05_03_0188 + 9417186-9417306,9417418-9417604,9417669-9417801,941... 27 9.4
05_03_0175 + 9222749-9222819,9223045-9223116,9223426-9223497,922... 27 9.4
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218... 27 9.4
03_05_0834 - 28051067-28051381,28051675-28052120,28052330-280526... 27 9.4
01_06_0779 - 31931893-31933317 27 9.4
01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942 27 9.4
>07_03_1698 +
28803971-28804534,28804614-28804696,28804780-28804900,
28804982-28805155,28805245-28805349,28805439-28805765
Length = 457
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIV 605
+G DFE+ K++G+G +GKVFQVRK + +AMKV++K I+
Sbjct: 115 IGLDDFEILKLVGQGAFGKVFQVRK---KGTSEIYAMKVMRKDKIL 157
>03_02_0909 -
12310460-12310759,12310882-12310989,12311099-12311272,
12311370-12311490,12311569-12311651,12311754-12312420,
12314073-12314440
Length = 606
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIV 605
+G DFE+ K++G+G +GKVFQVRK + +AMKV++K I+
Sbjct: 272 VGLDDFEVLKLVGQGAFGKVFQVRK---KGTSEIYAMKVMRKDKIL 314
>03_05_0890 - 28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/73 (32%), Positives = 41/73 (56%)
Frame = +3
Query: 390 NSIVEAEGSETIQLCEDNVNPGQCKRLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAH 569
+++++ E L V+P + R DFE+ K + +G +G+VF +K T G
Sbjct: 880 STVMDEEDDVVRSLRASPVHPVK-DRTSIDDFEIIKPISRGAFGRVFLAKKRT---TGDL 935
Query: 570 FAMKVLKKASIVR 608
FA+KVL+KA ++R
Sbjct: 936 FAIKVLRKADMIR 948
>12_02_1155 +
26541137-26541142,26541244-26542623,26542730-26542852,
26542996-26543168,26543332-26543572,26543931-26544023,
26544092-26544232,26544358-26544450,26544633-26544837,
26544993-26545078,26545532-26545620,26545736-26545820,
26545898-26545954,26546319-26546399,26547130-26547321
Length = 1014
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
R +DFE+ K + +G +G+VF +K + G FA+KVLKKA ++R
Sbjct: 606 RTSIEDFEIIKPISRGAFGRVFLAKK---RVTGDLFAIKVLKKADMIR 650
>12_02_1102 + 26088927-26090321
Length = 464
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVF--QVRKITGQDAGAHFAMKVLKKASIVRNQK 617
LGP+DF+L + +G G G V+ ++R +++ +AMKV+ + ++ R QK
Sbjct: 86 LGPRDFKLVRRIGGGDIGTVYLCRLRSSPERESPCMYAMKVVDRRAVARKQK 137
>05_06_0042 -
25131962-25132149,25132261-25132345,25132750-25132797,
25133084-25133197,25133279-25133410,25134029-25134124,
25134771-25135005,25135054-25135322,25135408-25135491,
25136529-25136703,25138018-25138229
Length = 545
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +3
Query: 456 QCKRLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
Q ++G +DFEL ++G+G +G+V R+ ++ +AMK LKK+ ++R
Sbjct: 107 QRHKMGVEDFELLTIIGRGAFGEVRLCREKASKNV---YAMKKLKKSEMLR 154
>01_06_1508 -
37847007-37847099,37847176-37847398,37847547-37847713,
37847791-37847925,37848225-37848390,37849170-37849248,
37849332-37849437,37849522-37849623,37849661-37849761,
37849888-37850068,37850174-37850365
Length = 514
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 480 DFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
DFEL K+ G G Y KV + +K +D G +A+K++ K I + K
Sbjct: 50 DFELGKIYGVGSYSKVVRAKK---KDTGNVYALKIMDKKFITKENK 92
>01_01_0750 + 5798607-5800142
Length = 511
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQKDTAHTK 635
FE+ K+LG+G + KV+ R + G A+KV++K I ++ TAH K
Sbjct: 25 FEVGKLLGQGNFAKVYHARNVA---TGEEVAIKVMEKEKIFKSGL-TAHIK 71
>12_01_1076 +
11184047-11184270,11186178-11186352,11186554-11186637,
11186712-11186953,11187029-11187266,11187814-11187893,
11187968-11188052,11188148-11188279,11188358-11188471,
11189550-11189594,11189840-11189924,11190043-11190102,
11190178-11190317
Length = 567
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
++G DFEL ++G+G +G+V R+ + +AMK LKK+ ++R
Sbjct: 114 KMGVDDFELLTIIGRGAFGEVRLCREKATSNV---YAMKKLKKSEMLR 158
>01_02_0047 +
10621234-10621422,10621512-10621574,10623049-10623120,
10623163-10623234,10623335-10623442,10623615-10623695,
10623780-10623833,10623921-10624046,10624139-10624345,
10624457-10624558,10624711-10624827,10624930-10625001,
10625096-10625170,10625297-10625416
Length = 485
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIV 605
+E+ + LG+G +GKV R + GAHFA+K+L + I+
Sbjct: 19 YEIGRTLGEGNFGKVKYARHLA---TGAHFAIKILDRNKIL 56
>09_04_0520 + 18286435-18287279,18287818-18288697
Length = 574
Score = 34.7 bits (76), Expect = 0.062
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
LG F L K LG G G V+ + +++G ++FAMKV+ KAS+ +K
Sbjct: 174 LGLNHFRLLKKLGSGDIGSVY-LSELSG--TRSYFAMKVMDKASLASRKK 220
>05_01_0268 -
2053420-2053539,2053636-2053710,2053805-2053867,
2053977-2054093,2054332-2054436,2054559-2054768,
2054858-2054983,2055061-2055114,2055198-2055278,
2055419-2055526,2055579-2055719,2056396-2056629
Length = 477
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIV 605
+E+ + LG+G +GKV R + G HFA+K+L + +V
Sbjct: 13 YEMGRTLGEGNFGKVKYARHLA---TGGHFAVKILDRGRVV 50
>01_01_0938 + 7400843-7401522,7402192-7403065
Length = 517
Score = 34.7 bits (76), Expect = 0.062
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIV-RNQKDTAHTK 635
LG F L K LG G G V+ V +D A FAMKV+ K S++ RN+ A T+
Sbjct: 119 LGLVHFRLLKRLGYGDIGSVYLVEL---RDTDAFFAMKVMDKESLISRNKLVRAQTE 172
>10_08_0364 +
17217631-17217833,17218134-17218308,17218391-17218474,
17218561-17218802,17218883-17219108,17219246-17219325,
17219408-17219492,17219665-17219796,17219927-17220040,
17220123-17220170,17220413-17220497,17220722-17220834
Length = 528
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 456 QCKRLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
Q ++ DF+L ++GKG +G +VR ++ G +AMK L+K+ ++R
Sbjct: 104 QRHKMSVDDFDLLTMIGKGAFG---EVRVCREKNTGNVYAMKKLRKSEMLR 151
>06_02_0007 - 10533689-10534565,10535054-10535946
Length = 589
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
LG F+L K LG G G V+ + +++G + +FAMKV+ KAS+ +K
Sbjct: 190 LGLSHFKLLKKLGCGDIGSVY-LSELSGTKS--YFAMKVMDKASLASRKK 236
>06_01_0346 -
2499108-2499348,2499659-2499864,2499970-2500152,
2500682-2500819,2501482-2501566,2504910-2504967,
2505360-2505441,2506331-2506462,2506547-2506647,
2507850-2507898
Length = 424
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 444 VNPGQCKRLGPQDFELRKVLGKGGYGKVFQVR-KITGQDAGAHFAMKVLKKASIVRNQKD 620
+ P +L D + KV+GKG G V VR K TGQ FA+KVLK + ++K
Sbjct: 173 IEPLDHNQLSLDDLDAIKVIGKGSSGIVQLVRHKWTGQ----FFALKVLKGLMYLHHEKH 228
Query: 621 TAH 629
H
Sbjct: 229 IIH 231
>02_05_0585 + 30155021-30155910,30156130-30157006
Length = 588
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
+G F L K LG G G V+ + +++G A ++FAMK++ KAS+ +K
Sbjct: 189 IGLSHFRLLKKLGCGDIGSVY-LSELSG--AKSYFAMKIMDKASLASRKK 235
>01_01_0620 -
4621291-4621379,4621722-4621803,4622238-4622282,
4623701-4623892,4625224-4625337,4625430-4625561,
4626356-4626440,4626526-4626605,4626791-4627034,
4627376-4627617,4628232-4628315,4628427-4628601,
4629351-4629464,4630025-4630236
Length = 629
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +3
Query: 480 DFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKAS-IVRNQ 614
DFEL ++G+G +G+V R+ T + +AMK LKK+ +VR Q
Sbjct: 153 DFELLTIIGRGAFGEVRLCREKTSSNI---YAMKKLKKSDMVVRGQ 195
>05_03_0086 + 8279518-8280320,8280923-8281844
Length = 574
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIV-RNQKDTAHTK 635
F L K LG G G V+ V ++ G A FAMKV+ KASI RN+ A T+
Sbjct: 165 FRLLKRLGYGDIGSVYLV-ELRG--TSAFFAMKVMDKASIASRNKMARAETE 213
>02_05_0166 + 26412217-26413403,26413918-26414800
Length = 689
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 453 GQCKRLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
G+ LG F L K LG G G V+ + +++G +FAMKV+ KAS+ +K
Sbjct: 283 GRGNVLGMSHFRLLKRLGCGDIGSVY-LSELSG--TRCYFAMKVMDKASLASRKK 334
>04_04_0696 + 27328043-27329259,27329887-27330757
Length = 695
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
LG F L K LG G G V+ + +++G +FAMKV+ KAS+ +K
Sbjct: 298 LGMSHFRLLKRLGCGDIGSVY-LSELSG--TRCYFAMKVMDKASLASRKK 344
>12_02_1026 - 25478462-25479232,25479249-25479821
Length = 447
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIV 605
+EL ++LG+G + KV+ R + G +A A+KV+ KA ++
Sbjct: 23 YELGRMLGRGTFAKVYLARAVAGGEA---VAVKVIDKAEVM 60
>05_06_0063 + 25289117-25290643
Length = 508
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRN 611
+EL ++LG G + KV+Q R D+G A+KVL K +R+
Sbjct: 37 YELGRLLGHGTFAKVYQAR---SADSGEPVAIKVLDKEKAMRH 76
>07_03_0958 + 22881718-22881999,22882114-22883880
Length = 682
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 480 DFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKAS 599
DF LG+GG+G V+ R + + AG H A+K + K S
Sbjct: 326 DFSEDGKLGEGGFGSVY--RGVLSEPAGVHVAVKRISKTS 363
>05_03_0565 - 15509949-15511304
Length = 451
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 453 GQCKRLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKK 593
G K++ +EL +VLG+G KV++ R GAH A+K ++K
Sbjct: 16 GYSKKVLQGRYELGRVLGQGASSKVYRARDAR---TGAHVAVKAIRK 59
>08_02_1092 + 24267737-24268641,24269005-24269884
Length = 594
Score = 31.9 bits (69), Expect = 0.44
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
LG F L K LG G G V+ + +++G ++FAMKV+ K S+ +K
Sbjct: 194 LGLSHFRLLKKLGCGDIGSVY-LSELSG--TRSYFAMKVMDKGSLASRKK 240
>09_02_0104 - 4329068-4329926,4330967-4331811
Length = 567
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
LG F L K LG G G V+ + +++G +FAMK++ KAS+ +K
Sbjct: 174 LGLGHFRLLKRLGCGDIGSVY-LSELSGTKC--YFAMKIMDKASLASRKK 220
>07_03_1415 +
26410999-26411148,26411228-26411290,26412623-26412694,
26412798-26412905,26413023-26413103,26413176-26413229,
26413282-26413315,26413405-26413451,26413538-26413747,
26413861-26413962,26414240-26414356,26414460-26414531,
26414645-26414719,26414866-26414970
Length = 429
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQKD 620
+E+ + LG+G +GKV R D GA FA+K+L + I+ + D
Sbjct: 6 YEMGRALGEGHFGKVKLARHA---DTGAAFAIKILDRQRILAMKID 48
>03_06_0070 +
31461372-31461467,31461581-31461823,31462486-31462581,
31463430-31463644,31463726-31463798,31463889-31464005
Length = 279
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 480 DFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASI 602
DFE+ K +G+G +GKV+ R+ + +G A+KV KA +
Sbjct: 10 DFEIGKYIGEGKFGKVYLARE---KQSGYVVALKVTFKAKL 47
>03_05_0461 + 24549079-24550464
Length = 461
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVR----KITGQDAGAHFAMKVLKKASIVRNQK 617
LGP+DF L + +G G G V+ R + G + +AMKV+ + ++ + K
Sbjct: 96 LGPRDFTLVRRVGAGDIGTVYLCRLDGKRGAGSPSPCEYAMKVVDRRALAKKGK 149
>01_06_0780 - 31938064-31938127,31940191-31941743
Length = 538
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
+EL +VLG+G + KV+Q R + + A+KVL K V+
Sbjct: 44 YELGRVLGQGSFAKVYQARHLETDEC---VAIKVLDKEKAVK 82
>10_01_0099 - 1202668-1203023,1203097-1206037
Length = 1098
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 477 QDFELRKVLGKGGYGKVFQVRKITGQ 554
+DF+ + ++G GGYGKV++ + GQ
Sbjct: 807 EDFDDKYIIGAGGYGKVYRAQLQDGQ 832
>06_03_0701 -
23655762-23655857,23656067-23656141,23656245-23656301,
23656385-23656501,23657286-23657405,23657491-23657613,
23657967-23658056,23658184-23658309,23658809-23658901,
23658947-23659021,23659115-23659222,23659481-23659552,
23659673-23659735,23660850-23661017
Length = 460
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +3
Query: 453 GQCKRLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQ 614
G+ KR+G +E+ + +G+G + KV + D GA AMKVL K +I+ ++
Sbjct: 4 GRKKRVGR--YEVGRTIGQGTFAKV---KFAVDADTGAAVAMKVLDKDTILNHR 52
>06_02_0185 + 12774608-12775970,12776058-12776983
Length = 762
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLK-KASIVRNQKD 620
R G +DF + LG+GGYG V++ + G G + V + A+ + Q+D
Sbjct: 383 RKGTEDFAAKNKLGQGGYGVVYKA-VVAGDSDGESVEVAVKQFSAANTKGQED 434
>02_05_1213 -
34963971-34964658,34965030-34965270,34965347-34965736,
34966515-34966781,34966881-34967249,34967931-34968014,
34968113-34968226,34969952-34970018
Length = 739
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 381 LHVNSIVEAEGS--ETIQLCEDNVNPGQCKRL--GPQDFELRKVLGKGGYGKVFQVRKIT 548
L V+ + A S T+ C +V +L F+ ++VLG+GG+G+V+
Sbjct: 306 LSVSRVSSASASMLSTVATCTTSVKTFSLSQLEKATDGFDSKRVLGQGGFGRVYH----G 361
Query: 549 GQDAGAHFAMKVLKK 593
D G A+K+L +
Sbjct: 362 TMDGGDEIAVKLLTR 376
>07_03_1737 +
29137654-29137842,29137999-29138061,29138196-29138267,
29138411-29138518,29138615-29138695,29138818-29138871,
29138956-29139081,29139162-29139251,29139444-29139566,
29139667-29139777,29139927-29140040,29140214-29140270,
29140350-29140424,29140526-29140600
Length = 445
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQ 614
+EL + +G+G + KV R + G H A+K+L KA + +++
Sbjct: 19 YELGRAIGQGTFAKV---RFAKNMETGDHVAIKILDKAKVQKHR 59
>01_01_1155 + 9191249-9192439
Length = 396
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQKDTAH 629
F + ++GKG +G V+ R + G D G +V KK +V K +H
Sbjct: 16 FAAKNLVGKGSHGNVYVARLVCGGDGGGG---RVRKKKVVVVAVKRASH 61
>01_01_0363 + 2850954-2853675,2853819-2854225
Length = 1042
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 471 GPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKV 584
G +F +LGKG YG V+ K T QD G A+KV
Sbjct: 717 GSNEFSEANLLGKGRYGSVY---KCTLQDEGEPVAIKV 751
>01_01_0361 + 2838979-2841745,2841897-2842285
Length = 1051
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 471 GPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKV 584
G +F +LGKG YG V+ + T +D GA A+KV
Sbjct: 732 GSNEFSEANLLGKGSYGSVY---RCTLEDEGAIVAVKV 766
>10_08_0664 -
19677371-19677393,19678071-19678173,19678397-19678480,
19678557-19678652,19678735-19678785,19679043-19679183,
19679258-19679314,19679559-19679633,19679737-19680009,
19680114-19680173,19680513-19680605,19680692-19680946,
19681832-19681891
Length = 456
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 396 IVEAEGSETIQLCEDNVNPGQCKRLGPQDFELRKVLGKGGYGKVFQVRKI-TGQ 554
IV A G+ET Q+ ++ K + +V+G G +G VFQ + + TG+
Sbjct: 111 IVNANGTETGQIIVTSIGGQNGKPKQKVSYMAERVVGTGSFGVVFQAKCLETGE 164
>08_02_0813 + 21459776-21461128
Length = 450
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
+E+ +VLG G +G+V R + G A+KV+ K +VR
Sbjct: 22 YEMGRVLGHGNFGRVHVARDLR---TGRSVAVKVVAKEKVVR 60
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 420 TIQLCEDNVNPGQCKRL--GPQDFELRKVLGKGGYGKVFQ 533
TI C V L ++F K++G+GGYG+V++
Sbjct: 284 TIATCPPTVKTFSISELEKATENFSFNKIIGEGGYGRVYR 323
>03_05_0239 +
22244565-22245144,22245249-22245594,22246847-22246868,
22246982-22247054,22247131-22247233,22247312-22247366,
22247448-22247542,22247913-22248204,22248292-22248495,
22248583-22248615
Length = 600
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 480 DFELRKVLGKGGYGKVFQVRKITGQDA 560
+F++ K+LGKG YG+V++ GQ A
Sbjct: 333 NFKINKLLGKGRYGEVYECTYSNGQYA 359
>01_06_0872 +
32609792-32610178,32611262-32611387,32611477-32611550,
32611944-32612013,32612088-32612143,32612236-32612307,
32612384-32612478,32612660-32612726,32612809-32612938,
32613135-32613350,32613461-32613591,32614044-32614218,
32614292-32614382,32614653-32614810,32615059-32615247,
32615551-32615564,32616003-32616228
Length = 758
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 7/61 (11%)
Frame = +3
Query: 390 NSIVEAEG--SETIQLCED--NVNPGQCK-RLG--PQDFELRKVLGKGGYGKVFQVRKIT 548
N +V+ +G +E I ED N +P K ++G PQ +++ + LGKGG+G+V+ R+++
Sbjct: 101 NKVVKMDGGSAEKIGGGEDDGNASPVPDKVQVGHSPQ-YKVERKLGKGGFGQVYVGRRVS 159
Query: 549 G 551
G
Sbjct: 160 G 160
>11_01_0083 - 629885-631189
Length = 434
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
+EL ++LGKG +GKV R + ++ A+K++ K I++
Sbjct: 12 YELGRLLGKGTFGKVHYARNL---ESNQSVAIKMMDKQQILK 50
>10_08_0512 +
18455454-18456121,18456214-18456318,18457493-18457615,
18457732-18457902,18458076-18458205,18458458-18458670,
18458757-18458866,18459144-18459186
Length = 520
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQD 557
F V+G+GGYG V++ R I G D
Sbjct: 189 FSKENVIGEGGYGVVYRGRLINGTD 213
>09_04_0136 + 14972687-14973901
Length = 404
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
+E+ +VLG G +G+V R + G AMKV+ K + R
Sbjct: 11 YEMGRVLGHGNFGRVHAARDVR---TGRAVAMKVVSKDKVER 49
>02_01_0457 - 3283759-3285240
Length = 493
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
+E+ + LG+G + KV+ R +T +G A+K++ K + R
Sbjct: 12 YEIGRQLGQGNFAKVYYARNLT---SGQAVAIKMIDKEKVTR 50
>01_01_0752 - 5808798-5810183
Length = 461
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
+EL ++LG+G + KV+ R + + A+KV+ K ++R
Sbjct: 12 YELGRMLGQGTFAKVYHARNLASNQS---VAIKVIDKEKVLR 50
>01_01_0647 -
4909311-4909412,4909538-4909610,4909930-4910047,
4910133-4910229,4910350-4910445,4910536-4910631,
4910725-4910871,4911877-4911987,4912582-4912620
Length = 292
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 456 QCKRLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQ 614
+ KR DF++ K LG+G +G V+ R+ + + A+KVL K+ + ++Q
Sbjct: 20 EVKRWVLSDFDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLKQSQ 69
>12_01_0084 - 678324-679643
Length = 439
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
+EL ++LGKG +GKV R + ++ A+K++ K +++
Sbjct: 12 YELGRLLGKGTFGKVHYARNL---ESNQSVAIKMMDKQQVLK 50
>09_04_0135 - 14954060-14954156,14955027-14956024
Length = 364
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQ 614
+EL ++LG+G + KV+ R + +G A+KV+ KA + R +
Sbjct: 22 YELGRLLGQGTFAKVYYGRDLR---SGESVAIKVIDKARLRRTE 62
>07_03_0767 -
21360999-21361157,21361185-21361274,21361413-21361563,
21361650-21361887,21361984-21362191,21362442-21362462,
21363884-21364011,21364108-21364245,21364820-21365654
Length = 655
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 402 EAEGSETIQLCEDNVNPGQCKRLGPQDFELRKVLGKGGYGKVFQVR--KITGQDAGAHFA 575
E + SE ++ + + ++ +F K LG+GG+G V++ R + G G A
Sbjct: 324 ELDASEDLESVKSTLITLASLQVATDNFHESKKLGEGGFGAVYKKRIIDLKGLLFGQEVA 383
Query: 576 MKVLKKAS 599
+K L K S
Sbjct: 384 VKRLAKGS 391
>05_02_0102 - 6616497-6616601,6616652-6617884
Length = 445
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
+EL + LG G + KV+Q R + +G A+KV+ K +R
Sbjct: 12 YELGRSLGHGTFSKVYQARSLV---SGETVAVKVIDKEKALR 50
>04_02_0004 -
8430902-8431210,8431295-8431445,8431542-8431830,
8431873-8432083,8432184-8432380,8432454-8432555,
8432666-8433998
Length = 863
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +3
Query: 375 PELHVNSIVEAEGSETIQLCEDNVNPGQCKRLGPQDFELRKVLGKGGYGKVFQVRKITGQ 554
P H+N E GSE ++L +++ D+ L LGKGG+GKV++
Sbjct: 496 PFQHMNDSNEV-GSENVELSSVDLDSVLTATNNFSDYNL---LGKGGFGKVYK----GVL 547
Query: 555 DAGAHFAMKVLKKAS 599
+ G A+K L K S
Sbjct: 548 EGGIEVAVKRLSKGS 562
>02_05_0609 -
30335054-30335374,30335491-30335870,30336102-30336443,
30336551-30336700,30336781-30336878,30336986-30337045,
30337140-30337211,30337337-30337480,30337584-30337655,
30337767-30337899,30338076-30338181
Length = 625
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +3
Query: 438 DNVNPGQCKR-------LGPQDFELRKVLGKGGYGKVFQ 533
+NVN G KR + ++F + +LGKGG+G V++
Sbjct: 283 ENVNLGNVKRFQFRELQVATENFSNKNILGKGGFGNVYR 321
>12_02_0134 -
14071190-14071435,14071800-14071988,14072114-14072194,
14072261-14072404,14072528-14072761,14072836-14073981,
14074863-14074922,14075178-14075420,14075509-14075607,
14076196-14076367,14076597-14076735,14077514-14077624,
14077695-14077797,14077885-14077962,14078054-14078122,
14078203-14078275,14078891-14078975,14079473-14079536,
14079963-14080073,14080139-14080213,14080306-14080398,
14080982-14081056,14081172-14081261
Length = 1259
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQ-VRKITGQDAGAHFAMKVLKKASIVRN 611
+G +D+ + ++G+G +GKV+ RK T Q F +K K + N
Sbjct: 1 MGIEDYHVIVLVGEGSFGKVYMGRRKYTRQTVAMKFILKHGKTDKDIHN 49
>07_01_0363 -
2675951-2676049,2676146-2676279,2676362-2676395,
2676485-2676604,2676720-2676836,2676924-2677043,
2677129-2677218,2677313-2677438,2677566-2677619,
2677856-2677936,2678025-2678132,2678218-2678289,
2678885-2678947,2679476-2679646
Length = 462
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQ 614
+EL + LG+G + KV R D+G + A+K+L K +++++
Sbjct: 13 YELGRTLGEGTFAKVKFARNA---DSGENVAIKILDKDKVLKHK 53
>03_02_0094 -
5583932-5584036,5584137-5584200,5584305-5584387,
5584523-5584588,5584711-5584801,5585259-5585392,
5586219-5586413,5586886-5587015,5587873-5587958
Length = 317
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 480 DFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
D+E+ + +G+G Y +VF+ +T + +K +KK I R K
Sbjct: 33 DYEVVRKVGRGKYSEVFEGINVTNDERCIIKILKPVKKKKIKREIK 78
>02_05_0500 - 29538409-29539283,29540306-29541641
Length = 736
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQKD 620
R G +F+ + LG+GGYG V++ + A+K A+ + Q+D
Sbjct: 375 RRGTNNFDEKMKLGQGGYGVVYRATVVGENGQNMEVAVKQFSGAN-TKGQED 425
>01_05_0793 +
25278846-25279504,25279598-25279702,25280949-25281071,
25281167-25281337,25281440-25281569,25281797-25282039,
25282084-25282202,25282269-25282331,25282423-25282486
Length = 558
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 468 LGPQDFELRKVLGKGGYGKVFQVRKITGQD 557
L F VLG+GGYG V++ R + G +
Sbjct: 181 LATNRFSRENVLGEGGYGVVYRGRLVNGTE 210
>01_01_0691 -
5328169-5328228,5328300-5328488,5328611-5328768,
5329677-5329767,5330359-5330438,5330472-5330533,
5330603-5330730,5331290-5331508,5331586-5331715,
5331804-5331870,5331968-5332062,5332150-5332221,
5332307-5332362,5332485-5332554,5332662-5332735,
5332820-5332954,5334135-5334314
Length = 621
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAG 563
++L + LGKGG+G+V+ R+I+ G
Sbjct: 69 YKLERKLGKGGFGQVYVGRRISSPTHG 95
>01_01_0115 - 856957-858055,858479-858538,858802-859583
Length = 646
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 492 RKVLGKGGYGKVFQVRKITGQDAGAHFAMKVL 587
R+ LG+GGYG V++ + G AH A+KVL
Sbjct: 335 REKLGQGGYGSVYKGVLLPG---NAHVAVKVL 363
>11_06_0351 -
22577666-22577989,22578282-22578676,22578961-22579308,
22579449-22579583,22579664-22579731,22579804-22579869,
22579970-22580041,22580143-22580286,22580392-22580463,
22580805-22580872
Length = 563
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQ 533
++ +F + VLGKGG+GKV++
Sbjct: 229 QIATNNFSEQNVLGKGGFGKVYK 251
>10_08_0603 -
19120434-19120538,19121209-19121310,19121430-19121462,
19122049-19122216,19122311-19122373,19122514-19122624,
19122926-19123035,19123150-19123446,19123632-19123710,
19123811-19123919,19124000-19124041,19124743-19124873,
19126150-19126797
Length = 665
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASI 602
+EL K +G+G +G R G G A+KV+ KA +
Sbjct: 178 YELGKEVGRGHFGHTCLARARKGDMRGQLLAVKVISKAKM 217
>09_02_0531 + 10312743-10313293,10314313-10315030
Length = 422
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 477 QDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASI 602
+DF + LG+GG+G V+ R G G +KK S+
Sbjct: 77 RDFAEEEKLGQGGFGNVYLGRLAVGTGGGEDHQEVAVKKFSM 118
>07_03_0762 +
21324550-21325414,21325606-21325746,21325993-21326177,
21326200-21326410,21326526-21326769,21326853-21327003,
21327089-21327439
Length = 715
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQVRKIT 548
R+ DF K++G+GG+G V++V T
Sbjct: 357 RVATDDFADTKMIGQGGFGMVYKVENHT 384
>05_05_0212 + 23297636-23297970,23298260-23298734
Length = 269
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
+E+ + LG+G +GKV+ R ++ +G A+K++ K I++
Sbjct: 11 YEIGRQLGQGTFGKVYYARNLS---SGHSVAIKMIDKEIIMK 49
>04_04_0111 -
22842337-22842648,22843008-22843402,22843732-22844073,
22844154-22844282,22844402-22844514,22844596-22844667,
22844783-22844859,22844978-22845052,22845058-22845121,
22845332-22845403,22845496-22845628,22846859-22846961
Length = 628
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQVRKITG 551
++ +F + +LG+GG+GKV++ R G
Sbjct: 300 QVATDNFSNKNILGRGGFGKVYKGRLADG 328
>03_06_0061 +
31352703-31353037,31353145-31353274,31353708-31353902,
31354696-31354725,31355238-31355395,31355756-31355846,
31355924-31355989,31356331-31356413,31356495-31356558,
31356641-31356709,31356798-31356833
Length = 418
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 471 GPQD-FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
G QD +E+ + LG+G Y +VF+ + G + +K +KK I R K
Sbjct: 112 GEQDGYEVLRKLGRGKYSEVFEGFRPGGDERCVIKILKPVKKKKIKREIK 161
>02_05_0499 - 29534462-29535315,29535871-29537221
Length = 734
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQVRKITGQD 557
R G +F+ + LG+GGYG V++ + G+D
Sbjct: 380 RRGTNNFDEKMKLGQGGYGVVYRA-TVVGED 409
>02_02_0468 +
10633992-10634064,10635998-10636130,10636244-10636315,
10637028-10637171,10637271-10637342,10637451-10637516,
10637603-10637673,10637796-10637936,10638347-10638688,
10638989-10639383,10639481-10639795
Length = 607
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQ 533
++ +F R VLG+GG+GKV++
Sbjct: 278 QIATDNFSERNVLGQGGFGKVYK 300
>02_01_0581 -
4307182-4307358,4307387-4307461,4307559-4307621,
4307715-4307819,4307917-4308024,4308123-4308260,
4308357-4308446,4308533-4308658,4308728-4308781,
4308865-4308936,4309060-4309167,4309272-4309343,
4309456-4309518,4309747-4309908
Length = 470
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRN 611
+ + + +G G + KV R D GA A+KV+ K ++RN
Sbjct: 10 YRVGRTIGAGTFAKV---RLAVDADTGATVAVKVIDKRMVIRN 49
>01_06_1186 +
35223272-35224723,35225536-35225610,35226245-35226585,
35226621-35227005,35227131-35227559
Length = 893
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVR 608
+E+ K LG+G + KV+ R +T G A+K++ K +++
Sbjct: 11 YEVGKQLGQGTFAKVYYARNLT---TGQAVAIKMINKDKVMK 49
>01_06_0948 -
33242219-33242530,33242632-33242782,33242874-33243111,
33243196-33243298,33243323-33243406,33243640-33243815,
33243943-33244074,33248406-33248967,33249084-33249842
Length = 838
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASI 602
F + LG+GG+G V++ + GQ+ A+K L K S+
Sbjct: 527 FSINNKLGEGGFGPVYKGKLEDGQE----IAVKTLSKTSV 562
>01_01_0114 - 851249-852372,852577-852740,852838-853568
Length = 672
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 492 RKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKAS 599
R LG+GGYG V++ ++G H A+K+L AS
Sbjct: 356 RDKLGQGGYGSVYKGVLLSGD---VHVAVKMLNGAS 388
>08_02_0825 -
21570628-21570715,21571436-21571812,21572364-21572755,
21573943-21574311,21574395-21574580,21574709-21574845,
21575030-21575089,21575206-21575277,21575399-21575542,
21575702-21575773,21575928-21576060,21576157-21576247
Length = 706
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITG 551
F R +LGKGG+G V++ R G
Sbjct: 334 FSARNILGKGGFGDVYRGRLSDG 356
>07_03_0765 -
21341872-21342198,21342482-21342635,21342716-21342953,
21343072-21343282,21343475-21343611,21347267-21348179
Length = 659
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +3
Query: 387 VNSIVEAEGSETIQLCEDNVNPGQCKRLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGA 566
VN + ++ +Q + R+ DF K LG+GG+G V++ GQ+
Sbjct: 302 VNGVPTESSTDDMQSIGSLILDLSTLRVATDDFSEHKRLGEGGFGVVYKGDLPKGQEIAV 361
Query: 567 HFAMKVLKK 593
K K+
Sbjct: 362 KRLAKTSKQ 370
>06_03_1384 +
29786028-29786657,29788581-29788711,29788987-29789028,
29789383-29789441,29789774-29790070,29790180-29790289,
29790966-29791070,29791201-29791263,29791766-29791933,
29792111-29792248
Length = 580
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +3
Query: 405 AEGSETIQLCEDNVNPGQCKRLGPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKV 584
A+G+ET + + G K G + +EL K +G+G +G G+ G A+K+
Sbjct: 149 ADGAETERPLDKTF--GFSKNFGAK-YELGKEVGRGHFGHTCSAVVKKGEYKGQTVAVKI 205
Query: 585 LKKASI 602
+ KA +
Sbjct: 206 IAKAKM 211
>06_01_0856 -
6495222-6495548,6496046-6496440,6496573-6496914,
6496992-6497129,6497426-6497502,6497585-6497656,
6498025-6498075,6498458-6498529,6498614-6498746,
6498869-6498947
Length = 561
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQVRKITG 551
++ +F +LG+GG+GKV++ R + G
Sbjct: 228 QVATDNFSQTNLLGRGGFGKVYKGRLLDG 256
>05_03_0186 +
9365179-9365342,9367332-9367403,9368362-9368433,
9368719-9368790,9368889-9368954,9369043-9369114,
9369716-9369790,9370059-9370124,9370360-9370404,
9370713-9371064,9371147-9371393,9371418-9371576,
9371659-9371807,9371878-9372088,9372242-9372473,
9372557-9372707,9373147-9373494
Length = 850
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQV 536
+L +F + ++G+GGYG V++V
Sbjct: 505 KLATDNFNSQNIIGEGGYGPVYKV 528
>02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203
Length = 740
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKAS 599
F+ R V+GKGG G V+ R +D GA A+K + A+
Sbjct: 406 FDERNVIGKGGNGTVY--RGTIAKDNGAVVAIKRCRLAT 442
>01_07_0256 -
42328795-42329172,42330245-42330379,42330783-42331033,
42331290-42331341,42331619-42331647,42331812-42332105,
42332229-42332378,42333915-42334405,42334513-42334613,
42334941-42335037,42335882-42335950,42336036-42336122,
42336423-42336494,42336795-42336863,42337784-42337858,
42338230-42338301,42338378-42338449,42338533-42338676,
42339106-42339177,42339294-42339365,42339804-42339954,
42340204-42340297
Length = 1008
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 471 GPQDFELRKVLGKGGYGKVFQ 533
G DF ++G+GGYGKV++
Sbjct: 651 GTNDFSDSALIGQGGYGKVYR 671
>01_06_0677 -
31104736-31104897,31105046-31105234,31105313-31105470,
31105558-31105648,31105787-31105961,31106065-31106204,
31106293-31106511,31106589-31106718,31107163-31107229,
31107347-31107441,31107535-31107606,31107681-31107736,
31107995-31108060,31108151-31108264,31108787-31109092
Length = 679
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGA 566
+ + K LGKGG+G+V+ R++ GA
Sbjct: 111 YRVDKKLGKGGFGQVYVGRRMLANGPGA 138
>10_08_0943 +
21728294-21728675,21728767-21728840,21729469-21730443,
21730617-21730683,21730765-21730827,21731001-21731064,
21731162-21731255,21731352-21731435,21731523-21731612,
21731708-21731735,21732117-21732596,21732679-21732740,
21732820-21732929,21733014-21733101,21733228-21733557,
21733782-21733904
Length = 1037
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 477 QDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMK 581
++FE+ + G GGYG V++ R+ + G FA+K
Sbjct: 489 KNFEIEEEEGSGGYGTVYRARR---KSDGRLFAIK 520
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 480 DFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKAS 599
+F ++G+GG+GKV++V GQ+ A+K L K S
Sbjct: 2999 NFSKSCLIGRGGFGKVYKVTLENGQEV----AIKRLSKDS 3034
>08_01_0685 +
6025975-6026074,6026168-6026357,6026963-6027034,
6027187-6027258,6027354-6027425,6027784-6027855,
6027980-6028051,6028134-6028205,6028483-6028554,
6028791-6028865,6028970-6029041,6029134-6029199,
6029267-6029332,6029409-6029453,6029542-6029606,
6029697-6030076,6030455-6030653,6030725-6030883,
6030966-6031084,6031156-6031200,6031226-6031791,
6031871-6032021,6032117-6032454,6033702-6033765,
6034329-6034370,6035572-6035575,6035853-6036039,
6037252-6037323,6037687-6037758,6037867-6037938,
6038019-6038090,6038651-6038725,6038815-6038886,
6038988-6039053,6039163-6039228,6039348-6039392,
6039469-6039533,6039615-6039994,6040070-6040202,
6040354-6040512,6040599-6040717,6040805-6041015,
6041155-6041386,6041469-6041619,6041725-6042084
Length = 1952
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQVR-KITG 551
+L ++ + +LG+GGYG V+++ K+ G
Sbjct: 658 KLATNNYSSQNILGEGGYGPVYKISCKLVG 687
>08_01_0678 +
5878291-5878461,5879722-5879984,5881658-5881729,
5881807-5881878,5882092-5882166,5882443-5882517,
5883623-5883667,5883767-5883831,5883919-5884203,
5884234-5884298,5884435-5884636,5884735-5884905,
5885237-5885355,5886699-5886909,5887007-5887238,
5887325-5887475,5887547-5887945
Length = 890
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 480 DFELRKVLGKGGYGKVFQVRKITGQ 554
+F + +LG+GGYG V++ + + G+
Sbjct: 543 NFSTQNILGRGGYGLVYKGKLLDGR 567
>08_01_0500 +
4338111-4338195,4339910-4340042,4340116-4340187,
4340524-4340587,4341383-4341459,4341586-4341657,
4341741-4341853,4341995-4342126,4342204-4342545,
4342628-4343022,4343293-4343603,4343967-4344066
Length = 631
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITG 551
F + +LG+GG+GKV++ R G
Sbjct: 276 FSNKNILGRGGFGKVYKGRLADG 298
>07_01_0105 -
798883-798942,799118-799186,799282-799345,799434-799516,
799957-800022,800143-800233,800622-800779,801144-801338,
801499-801628,803016-803168,803877-803962
Length = 384
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 465 RLGPQD-FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
R G QD +E+ + +G+G Y +VF+ + + +K +KK I R K
Sbjct: 78 RWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIK 129
>06_01_1129 +
9326975-9327071,9327174-9327306,9327408-9327479,
9327593-9327736,9327950-9328021,9328219-9328278,
9328384-9328637,9329940-9330281,9332001-9332380,
9333867-9334235
Length = 640
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 7/39 (17%)
Frame = +3
Query: 438 DNVNPGQCKRLG-------PQDFELRKVLGKGGYGKVFQ 533
+NVN G KR + F + +LGKGG+G V++
Sbjct: 282 ENVNLGNVKRFSFRELQAATEGFSGKNILGKGGFGNVYR 320
>05_03_0188 +
9417186-9417306,9417418-9417604,9417669-9417801,
9418673-9418752,9421940-9422011,9422211-9422282,
9422361-9422432,9422720-9422791,9423038-9423109,
9423335-9423406,9423497-9423568,9423648-9423722,
9423824-9423895,9424072-9424137,9424223-9424299,
9424642-9425021,9425112-9425310,9425380-9425538,
9425620-9425738,9425942-9426092,9426257-9426488,
9426573-9426723,9426808-9427125
Length = 1007
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQ 533
+L +F + +LG+GGYG V++
Sbjct: 702 KLATDNFSSKNILGEGGYGPVYK 724
>05_03_0175 +
9222749-9222819,9223045-9223116,9223426-9223497,
9223609-9223680,9223765-9223836,9224408-9224482,
9224587-9224658,9224912-9224977,9225051-9225095,
9225220-9225724,9225807-9226005,9226080-9226238,
9226316-9226434,9226556-9226766,9226905-9227136,
9227219-9227369,9227458-9227781
Length = 838
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQVRKITGQ 554
RL +F + +LG+GGYG +++ + G+
Sbjct: 511 RLATDNFSSQNILGEGGYGMLYKGKLSDGR 540
>03_06_0003 +
30921197-30921388,30921514-30921632,30921742-30921811,
30922078-30922161,30922258-30922344,30922431-30922501,
30922648-30922702,30923374-30923509,30925009-30925103,
30925203-30925357,30925435-30925543,30925761-30925817,
30925913-30926027,30926177-30926264,30926738-30927501,
30927600-30927688,30928315-30928422,30928550-30928657,
30928887-30928977,30929235-30929287,30929557-30929712,
30930763-30930825,30931491-30931535,30932075-30932130,
30933051-30933132,30933238-30933354,30933428-30933530,
30933912-30934062,30934180-30934417,30934564-30934764,
30934850-30934935,30935036-30935135
Length = 1347
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQD 557
+EL LGKG YG V++ R + Q+
Sbjct: 726 YELLHELGKGSYGAVYKARDLRTQE 750
>03_05_0834 -
28051067-28051381,28051675-28052120,28052330-28052671,
28053170-28053310,28053419-28053489,28053575-28053640,
28053874-28054017,28054149-28054207,28054246-28054369,
28054730-28054862,28055138-28055187,28055715-28055824,
28057355-28057436,28057536-28057705,28057812-28058498,
28058645-28058794,28058908-28059039,28059444-28059594,
28060253-28060344,28062478-28062585
Length = 1190
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 465 RLGPQDFELRKVLGKGGYGKVFQ 533
+L F + VLG+GG+GKV++
Sbjct: 844 QLATDSFSEKNVLGQGGFGKVYK 866
>01_06_0779 - 31931893-31933317
Length = 474
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 483 FELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRN 611
++L ++LG+G + KV++ K+ G A+KV K ++ R+
Sbjct: 15 YKLGRLLGRGTFAKVYKAYKLA---TGEAVAIKVFDKEAVQRS 54
>01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942
Length = 1020
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 471 GPQDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKV 584
G +F +LGKG YG VF + T D A A+KV
Sbjct: 694 GSNEFSEANLLGKGRYGSVF---RCTLDDESALVAVKV 728
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,163,641
Number of Sequences: 37544
Number of extensions: 215618
Number of successful extensions: 1064
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -