Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt27d01
         (636 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    34   0.001
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.6  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +3

Query: 477 QDFELRKVLGKGGYGKVFQVRKITGQDAGAHFAMKVLKKASIVRNQK 617
           QD      LG GG+G+V ++ +I G D+   FA+K +KKA IV  ++
Sbjct: 365 QDLRPLATLGVGGFGRV-ELVQIAG-DSSRSFALKQMKKAQIVETRQ 409


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 153 KLVYFILIQFTYKLLLMHNTMN*ILYSVEN 64
           KL   IL+QF  KL   H++    L S+EN
Sbjct: 522 KLSKIILMQFGDKLESSHDSFQAALRSIEN 551


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 153 KLVYFILIQFTYKLLLMHNTMN*ILYSVEN 64
           KL   IL+QF  KL   H++    L S+EN
Sbjct: 560 KLSKIILMQFGDKLESSHDSFQAALRSIEN 589


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = -1

Query: 150 LVYFILIQFTYKLLLMHNTMN*ILYSVENSQF 55
           ++Y IL   +     +  T+N +LY++ +++F
Sbjct: 324 IIYTILTYMSGVFYYLSTTVNPLLYNIMSNKF 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,176
Number of Sequences: 438
Number of extensions: 2581
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)