Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27c22
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 186 2e-47
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 181 4e-46
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 178 3e-45
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 178 3e-45
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 115 4e-26
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 115 4e-26
Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical pr... 110 8e-25
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 110 8e-25
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 110 8e-25
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 110 8e-25
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 110 8e-25
AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical ... 108 3e-24
U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin pro... 106 1e-23
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 103 2e-22
U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin iso... 102 2e-22
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 91 5e-19
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 91 5e-19
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 91 5e-19
U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin pro... 88 5e-18
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 85 3e-17
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 85 3e-17
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 85 3e-17
AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical... 73 2e-13
AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-1... 73 2e-13
AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical ... 73 3e-13
Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 69 3e-12
AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 69 3e-12
U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin iso... 65 4e-11
U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin pro... 65 4e-11
U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin pro... 65 4e-11
U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 31 1.0
AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical ... 30 1.8
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 28 5.4
U28943-7|AAK68294.1| 315|Caenorhabditis elegans Serpentine rece... 28 7.2
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr... 27 9.5
U22833-4|AAA64324.2| 181|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 186 bits (452), Expect = 2e-47
Identities = 92/140 (65%), Positives = 103/140 (73%)
Frame = +3
Query: 267 MGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTE 446
M +L + +L A A+ D+ KGPKVT KV FDM+IG IG IVIGLFGKTVPKT
Sbjct: 1 MKSLLVVAAVLAVGALAQGDDA-KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTAT 59
Query: 447 NFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYG 626
NF +LA+KP+GEGY GSKFHRVI +FMIQ RSIYGE+F DENFKLKHYG
Sbjct: 60 NFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYG 119
Query: 627 AGWLSMANAGKDTNGSQFFI 686
AGWLSMANAG DTNGSQFFI
Sbjct: 120 AGWLSMANAGADTNGSQFFI 139
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 181 bits (441), Expect = 4e-46
Identities = 86/117 (73%), Positives = 92/117 (78%)
Frame = +3
Query: 336 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 515
KGPKVT KV FDM+IG IG IVIGLFGKTVPKT NF +LA+KP+GEGY GSKFHRVI
Sbjct: 23 KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVI 82
Query: 516 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
+FMIQ RSIYGE+F DENFKLKHYGAGWLSMANAG DTNGSQFFI
Sbjct: 83 ADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFI 139
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 178 bits (433), Expect = 3e-45
Identities = 88/137 (64%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Frame = +3
Query: 282 MALGILLFIAS--AKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFF 455
M+ +L F+ + A S E +GP+VT KV FDM+IG +G IVIGLFG+ VPKT +NF
Sbjct: 1 MSRALLFFVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFV 59
Query: 456 QLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGW 635
+LAQ+ EGEGY GSKFHRVI+NFMIQ RSIYGERFEDENFKL+HYG GW
Sbjct: 60 ELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGW 119
Query: 636 LSMANAGKDTNGSQFFI 686
LSMANAG+DTNGSQFFI
Sbjct: 120 LSMANAGEDTNGSQFFI 136
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 178 bits (433), Expect = 3e-45
Identities = 88/137 (64%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Frame = +3
Query: 282 MALGILLFIAS--AKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFF 455
M+ +L F+ + A S E +GP+VT KV FDM+IG +G IVIGLFG+ VPKT +NF
Sbjct: 1 MSRALLFFVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFV 59
Query: 456 QLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGW 635
+LAQ+ EGEGY GSKFHRVI+NFMIQ RSIYGERFEDENFKL+HYG GW
Sbjct: 60 ELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGW 119
Query: 636 LSMANAGKDTNGSQFFI 686
LSMANAG+DTNGSQFFI
Sbjct: 120 LSMANAGEDTNGSQFFI 136
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 115 bits (276), Expect = 4e-26
Identities = 60/117 (51%), Positives = 71/117 (60%), Gaps = 7/117 (5%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 515
KV FD+ IG++ G + + LF VPKT ENF L +G G +KGSKFHR+I
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRII 82
Query: 516 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
FMIQ SIYG +F+DENF LKH G G LSMANAG +TNGSQFFI
Sbjct: 83 PEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFI 139
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 115 bits (276), Expect = 4e-26
Identities = 60/117 (51%), Positives = 71/117 (60%), Gaps = 7/117 (5%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 515
KV FD+ IG++ G + + LF VPKT ENF L +G G +KGSKFHR+I
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRII 82
Query: 516 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
FMIQ SIYG +F+DENF LKH G G LSMANAG +TNGSQFFI
Sbjct: 83 PEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFI 139
>Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical
protein ZK520.5 protein.
Length = 172
Score = 110 bits (265), Expect = 8e-25
Identities = 59/117 (50%), Positives = 71/117 (60%), Gaps = 7/117 (5%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 515
KV FD+ IG G IV+ L+ VPKT ENF L +G+G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRII 64
Query: 516 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
FMIQ SI+GE+F+DENFK KH G G LSMAN G +TNGSQFF+
Sbjct: 65 PEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFL 121
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 110 bits (265), Expect = 8e-25
Identities = 60/114 (52%), Positives = 67/114 (58%), Gaps = 5/114 (4%)
Frame = +3
Query: 360 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEG--EGYKGSKFHRVIKNF 524
V ++ G IGTIVI LF P+T ENF Q K +G GYK FHRVIK+F
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDF 78
Query: 525 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
MIQ SIYG +F DENF+LKH G G LSMANAG DTNG QFFI
Sbjct: 79 MIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFI 132
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 110 bits (265), Expect = 8e-25
Identities = 60/114 (52%), Positives = 67/114 (58%), Gaps = 5/114 (4%)
Frame = +3
Query: 360 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEG--EGYKGSKFHRVIKNF 524
V ++ G IGTIVI LF P+T ENF Q K +G GYK FHRVIK+F
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDF 78
Query: 525 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
MIQ SIYG +F DENF+LKH G G LSMANAG DTNG QFFI
Sbjct: 79 MIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFI 132
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 110 bits (265), Expect = 8e-25
Identities = 61/117 (52%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 515
KV FD+ IG G IV+ L+ VPKT NF L G G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRII 64
Query: 516 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
NFMIQ SIYGE+F DENFK KH G G LSMANAG +TNGSQFF+
Sbjct: 65 PNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFL 121
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 110 bits (265), Expect = 8e-25
Identities = 61/117 (52%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 515
KV FD+ IG G IV+ L+ VPKT NF L G G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRII 64
Query: 516 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
NFMIQ SIYGE+F DENFK KH G G LSMANAG +TNGSQFF+
Sbjct: 65 PNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFL 121
>AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical
protein Y75B12B.2 protein.
Length = 171
Score = 108 bits (260), Expect = 3e-24
Identities = 59/117 (50%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 515
+V FD+ I G IV+ L+ VPKT ENF L +G G +KGSKFHR+I
Sbjct: 5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRII 64
Query: 516 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
FMIQ SIYGE+F DENFK KH G G LSMANAG +TNGSQFF+
Sbjct: 65 PEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFL 121
>U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin
protein.
Length = 171
Score = 106 bits (255), Expect = 1e-23
Identities = 58/117 (49%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 515
+V FD+ G IV+ L+ VPKT ENF L +G G +KGSKFHR+I
Sbjct: 5 RVFFDITTAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRII 64
Query: 516 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
FMIQ SIYGE+F DENFK KH G G LSMANAG +TNGSQFF+
Sbjct: 65 PEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFL 121
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 103 bits (246), Expect = 2e-22
Identities = 54/110 (49%), Positives = 65/110 (59%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQX 536
+V +KIG IG IVI L PKT ENF L G GY+GS FHR+I FM+Q
Sbjct: 140 RVYLGVKIGIRYIGRIVIELRTDVTPKTAENFRCLCTGERGFGYEGSIFHRIIPKFMLQG 199
Query: 537 XXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
+SIYG +F+DENF L+H G +SMAN G +TNGSQFFI
Sbjct: 200 GDFTKGDGTGGKSIYGTKFDDENFTLRHTMPGTVSMANCGANTNGSQFFI 249
>U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin
isoform 2 (cyp-2) protein.
Length = 171
Score = 102 bits (245), Expect = 2e-22
Identities = 57/117 (48%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 515
KV D+ IG G IV+ L+ PKT ENF L +G+G +KGSKFHR+I
Sbjct: 5 KVFIDITIGGKKGGRIVMELYNDIAPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRII 64
Query: 516 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
FMIQ SI+GE+F+DENFK KH G G LSMAN G +TNGSQFF+
Sbjct: 65 PEFMIQGGDFTEGNGTG-ESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFL 120
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 91.5 bits (217), Expect = 5e-19
Identities = 53/125 (42%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Frame = +3
Query: 330 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 491
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 492 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 671
GS FHRVIK FMIQ SIYG F+DEN LKH LSMAN G DTNG
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNG 120
Query: 672 SQFFI 686
SQFFI
Sbjct: 121 SQFFI 125
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 91.5 bits (217), Expect = 5e-19
Identities = 53/125 (42%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Frame = +3
Query: 330 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 491
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 492 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 671
GS FHRVIK FMIQ SIYG F+DEN LKH LSMAN G DTNG
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNG 120
Query: 672 SQFFI 686
SQFFI
Sbjct: 121 SQFFI 125
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 91.5 bits (217), Expect = 5e-19
Identities = 53/125 (42%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Frame = +3
Query: 330 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 491
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 492 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 671
GS FHRVIK FMIQ SIYG F+DEN LKH LSMAN G DTNG
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNG 120
Query: 672 SQFFI 686
SQFFI
Sbjct: 121 SQFFI 125
>U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin
protein 12 protein.
Length = 169
Score = 88.2 bits (209), Expect = 5e-18
Identities = 49/102 (48%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +3
Query: 384 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 563
D +G I + L+ P+T +NF QLA++ Y G+ FHR+I +FMIQ
Sbjct: 15 DTTMGKIALELYWNHAPRTCQNFSQLAKR---NYYNGTIFHRIIADFMIQGGDPTGTGRG 71
Query: 564 XXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFI 686
SIYG++F DE + +LKH GAG LSMANAG +TNGSQFFI
Sbjct: 72 GA-SIYGDKFSDEIDERLKHTGAGILSMANAGPNTNGSQFFI 112
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 85.4 bits (202), Expect = 3e-17
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 512
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 513 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
+K FMIQ SIYG F+DE FKLKH LSMAN G ++N SQFFI
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFI 123
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 85.4 bits (202), Expect = 3e-17
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 512
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 513 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
+K FMIQ SIYG F+DE FKLKH LSMAN G ++N SQFFI
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFI 123
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 85.4 bits (202), Expect = 3e-17
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 512
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 513 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
+K FMIQ SIYG F+DE FKLKH LSMAN G ++N SQFFI
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFI 123
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 85.4 bits (202), Expect = 3e-17
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 512
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 513 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 686
+K FMIQ SIYG F+DE FKLKH LSMAN G ++N SQFFI
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFI 123
>AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical
protein Y17G7B.9 protein.
Length = 483
Score = 72.9 bits (171), Expect = 2e-13
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +3
Query: 321 SDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSK 500
S++ P T KV+ + GD I I L+ K P NF QL + YKG+
Sbjct: 2 SNQYINEPITTGKVTLETTAGD-----IEIELWTKEAPLACRNFIQLCME---NYYKGTV 53
Query: 501 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQ 677
FHR++KNF++Q SIYG+ F+DE + +LK G + MANAG+D NGSQ
Sbjct: 54 FHRLVKNFILQGGDPTATGTGG-ESIYGKPFKDEIHQRLKFNRRGIVGMANAGRDDNGSQ 112
Query: 678 FF 683
FF
Sbjct: 113 FF 114
>AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-16
protein.
Length = 222
Score = 72.9 bits (171), Expect = 2e-13
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +3
Query: 321 SDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSK 500
S++ P T KV+ + GD I I L+ K P NF QL + YKG+
Sbjct: 2 SNQYINEPITTGKVTLETTAGD-----IEIELWTKEAPLACRNFIQLCME---NYYKGTV 53
Query: 501 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQ 677
FHR++KNF++Q SIYG+ F+DE + +LK G + MANAG+D NGSQ
Sbjct: 54 FHRLVKNFILQGGDPTATGTGG-ESIYGKPFKDEIHQRLKFNRRGIVGMANAGRDDNGSQ 112
Query: 678 FF 683
FF
Sbjct: 113 FF 114
>AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical
protein Y87G2A.6 protein.
Length = 629
Score = 72.5 bits (170), Expect = 3e-13
Identities = 48/101 (47%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 390 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 569
+ G I I LFG PKT ENF +++ Y G FHRVIK+FMIQ
Sbjct: 481 SFGDITIRLFGDECPKTVENFCTHSRRGY---YNGLTFHRVIKSFMIQ-TGDPSGKGTGG 536
Query: 570 RSIYGERFEDE-NFKLKHYGAGWLSMANA-GKDTNGSQFFI 686
SI+GE FEDE + +L+H +SMANA G +TNGSQFFI
Sbjct: 537 ESIWGEDFEDEFHPRLRHDKPFKVSMANAGGGNTNGSQFFI 577
>Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/100 (43%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +3
Query: 390 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 569
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQGGDPTGTGHGG- 342
Query: 570 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFI 686
SI+ + F DE H G LSMAN G +TNGSQFFI
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFI 382
>Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/100 (43%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +3
Query: 390 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 569
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQGGDPTGTGHGG- 342
Query: 570 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFI 686
SI+ + F DE H G LSMAN G +TNGSQFFI
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFI 382
>U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin
isoform 4 protein.
Length = 523
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/100 (43%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +3
Query: 390 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 569
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQGGDPTGTGHGG- 342
Query: 570 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFI 686
SI+ + F DE H G LSMAN G +TNGSQFFI
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFI 382
>AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin
MOG-6 protein.
Length = 523
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/100 (43%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +3
Query: 390 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 569
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQGGDPTGTGHGG- 342
Query: 570 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFI 686
SI+ + F DE H G LSMAN G +TNGSQFFI
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFI 382
>U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin
isoform 10 protein.
Length = 147
Score = 65.3 bits (152), Expect = 4e-11
Identities = 43/98 (43%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +3
Query: 396 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 575
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQTGDPTHSGKGG-ES 65
Query: 576 IYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFI 686
I+G FEDE LKH G +SMAN G D+N SQFFI
Sbjct: 66 IWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFI 103
>U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin
protein 10, isoform a protein.
Length = 147
Score = 65.3 bits (152), Expect = 4e-11
Identities = 43/98 (43%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +3
Query: 396 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 575
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQTGDPTHSGKGG-ES 65
Query: 576 IYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFI 686
I+G FEDE LKH G +SMAN G D+N SQFFI
Sbjct: 66 IWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFI 103
>U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin
protein 10, isoform b protein.
Length = 161
Score = 65.3 bits (152), Expect = 4e-11
Identities = 43/98 (43%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +3
Query: 396 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 575
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQTGDPTHSGKGG-ES 65
Query: 576 IYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFI 686
I+G FEDE LKH G +SMAN G D+N SQFFI
Sbjct: 66 IWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFI 103
>U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical
protein T22F3.12 protein.
Length = 174
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +3
Query: 357 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMI-- 530
KV D+ +G +V L + PKT ENF +L P G GYK F+RVI F
Sbjct: 4 KVFMDITADGAPLGKLVFELNTEKCPKTCENFVKLCTGPPGFGYKNCVFYRVIPTFCACS 63
Query: 531 QXXXXXXXXXXXXRSIYGER-FEDENFKLKHYGAGWLSMANAG-KDTNGSQFFI 686
+S +G + F+DENF++ H G L M N G ++TN S+F++
Sbjct: 64 GDFETQNARRDGGKSTFGTKYFDDENFEILHDKKGILGMDNYGWENTNSSRFYV 117
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 47.6 bits (108), Expect = 8e-06
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = +3
Query: 384 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 563
+ +G ++I LF K P+ + NF +L +K + Y ++FH + +N++ Q
Sbjct: 6 ETTLGDLIIDLFVKERPRCSLNFLKLCKK---KYYNLNQFHSIERNYVAQTGDPTGTGKG 62
Query: 564 XXR---SIYGER---FEDENF-KLKHYGAGWLSMANAGKDTNGSQFFI 686
+YGE+ FE E+ K++H G +S N G + GSQFFI
Sbjct: 63 GESVYSDMYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFI 110
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 47.6 bits (108), Expect = 8e-06
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = +3
Query: 384 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 563
+ +G ++I LF K P+ + NF +L +K + Y ++FH + +N++ Q
Sbjct: 6 ETTLGDLIIDLFVKERPRCSLNFLKLCKK---KYYNLNQFHSIERNYVAQTGDPTGTGKG 62
Query: 564 XXR---SIYGER---FEDENF-KLKHYGAGWLSMANAGKDTNGSQFFI 686
+YGE+ FE E+ K++H G +S N G + GSQFFI
Sbjct: 63 GESVYSDMYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFI 110
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +3
Query: 576 IYGER---FEDENF-KLKHYGAGWLSMANAGKDTNGSQFFI 686
+YGE+ FE E+ K++H G +S N G + GSQFFI
Sbjct: 1 MYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFI 41
>AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical
protein Y17G9B.4 protein.
Length = 262
Score = 29.9 bits (64), Expect = 1.8
Identities = 33/105 (31%), Positives = 39/105 (37%)
Frame = +3
Query: 360 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXX 539
V + IG G IVI LF VP+T +NF E G G H +K I+
Sbjct: 99 VFIHVSIGGIEEGCIVIQLFNDIVPRTAQNFESWC-TGEKRGKYGEPLH--LKECEIKMI 155
Query: 540 XXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGS 674
E F+DE K H LSM N K N S
Sbjct: 156 LPGSVIGFGDFEENCEYFDDEKSKENHC-KNVLSM-NIDKSENSS 198
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 605 VFIFKTFTIYTAPSSSITLGKITTLDHEIFNYSVELAPFVPLPL 474
+F T Y + SIT+ K T ++F +S+ L F+PL L
Sbjct: 228 LFQVTTLIYYICIAPSITISKDTHHRQKVFLFSILLQCFIPLTL 271
>U28943-7|AAK68294.1| 315|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 56 protein.
Length = 315
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -1
Query: 626 TIVLQLEVFIFKTFTI---YTAPSSSITLGKITTLDHEIFNYSV 504
+IVL + +IF + + +TAP T+ +T ++H +N S+
Sbjct: 122 SIVLIIVSYIFPVYNMIIPFTAPRDFTTVQNLTAIEHSTYNLSL 165
>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical
protein K12D12.2 protein.
Length = 1696
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 402 IVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKN 521
++ LF + + T ++ F Q P+ G GSK ++++N
Sbjct: 157 VIKNLFQQLINFTVQSEFARLQSPDVNGLGGSKHQKLVRN 196
>U22833-4|AAA64324.2| 181|Caenorhabditis elegans Hypothetical
protein W02B3.5 protein.
Length = 181
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -1
Query: 545 KITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLSK*SNHNSTNIVITNLHVK 366
K T HEIFN+ V + F L FL L++ S L+ + N I + VK
Sbjct: 54 KECTTKHEIFNFMVMASNF---NLNFLENLEKGQSKLKLVQKNRTVGNGLRITVALNEVK 110
Query: 365 AHL 357
AH+
Sbjct: 111 AHI 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,870,819
Number of Sequences: 27780
Number of extensions: 297979
Number of successful extensions: 714
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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