Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27c20
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009855-1|AAH09855.1| 475|Homo sapiens LTV1 homolog (S. cerevi... 132 9e-31
AL049844-1|CAI21442.1| 475|Homo sapiens LTV1 homolog (S. cerevi... 132 9e-31
AY326463-1|AAR99513.1| 74|Homo sapiens putative protein STRF7 ... 37 0.079
AF402000-1|AAM73764.1| 2542|Homo sapiens talin 2 protein. 31 3.9
BC022348-1|AAH22348.1| 125|Homo sapiens KIAA1598 protein protein. 31 5.2
AK001984-1|BAA92019.1| 125|Homo sapiens protein ( Homo sapiens ... 31 5.2
BC056757-1|AAH56757.1| 628|Homo sapiens solute carrier family 6... 30 6.9
AK055798-1|BAB71018.1| 628|Homo sapiens protein ( Homo sapiens ... 30 6.9
>BC009855-1|AAH09855.1| 475|Homo sapiens LTV1 homolog (S.
cerevisiae) protein.
Length = 475
Score = 132 bits (320), Expect = 9e-31
Identities = 77/151 (50%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Frame = +2
Query: 116 AVTFNLVHRSQRDPLAADETAPQRVLVPVNTIIPPTKDKDTEYTPEQRKEEQRKYGIYYD 295
AV+F+LVHRSQRDPLAADE+APQRVL+P I E+R+ EQRKYG+++D
Sbjct: 15 AVSFHLVHRSQRDPLAADESAPQRVLLPTQKI-----------DNEERRAEQRKYGVFFD 63
Query: 296 DDYNYLQHLKDTKEVTLVLQPKTPHKKKPXXXXXXXXXXXXXXXXXXXVTERLMLPSSVF 475
DDY+YLQHLK +P P + P + + LPSSVF
Sbjct: 64 DDYDYLQHLK---------EPSGPSELIPSSTFSAHNRREEKEETLVIPSTGIKLPSSVF 114
Query: 476 ASEFEEDVGLLNKAAP-QGLRLDLDPEVVAA 565
ASEFEEDVGLLNKAAP G RLD DP++VAA
Sbjct: 115 ASEFEEDVGLLNKAAPVSGPRLDFDPDIVAA 145
>AL049844-1|CAI21442.1| 475|Homo sapiens LTV1 homolog (S.
cerevisiae) protein.
Length = 475
Score = 132 bits (320), Expect = 9e-31
Identities = 77/151 (50%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Frame = +2
Query: 116 AVTFNLVHRSQRDPLAADETAPQRVLVPVNTIIPPTKDKDTEYTPEQRKEEQRKYGIYYD 295
AV+F+LVHRSQRDPLAADE+APQRVL+P I E+R+ EQRKYG+++D
Sbjct: 15 AVSFHLVHRSQRDPLAADESAPQRVLLPTQKI-----------DNEERRAEQRKYGVFFD 63
Query: 296 DDYNYLQHLKDTKEVTLVLQPKTPHKKKPXXXXXXXXXXXXXXXXXXXVTERLMLPSSVF 475
DDY+YLQHLK +P P + P + + LPSSVF
Sbjct: 64 DDYDYLQHLK---------EPSGPSELIPSSTFSAHNRREEKEETLVIPSTGIKLPSSVF 114
Query: 476 ASEFEEDVGLLNKAAP-QGLRLDLDPEVVAA 565
ASEFEEDVGLLNKAAP G RLD DP++VAA
Sbjct: 115 ASEFEEDVGLLNKAAPVSGPRLDFDPDIVAA 145
>AY326463-1|AAR99513.1| 74|Homo sapiens putative protein STRF7
protein.
Length = 74
Score = 36.7 bits (81), Expect = 0.079
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -1
Query: 522 GAALLSKPTSSSNSEANTELGSI 454
GAAL + PTSSSNSEANT+ G++
Sbjct: 13 GAALFNNPTSSSNSEANTDEGNL 35
>AF402000-1|AAM73764.1| 2542|Homo sapiens talin 2 protein.
Length = 2542
Score = 31.1 bits (67), Expect = 3.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 221 TKDKDTEYTPEQRKEEQRKYGIYYDDDYNYLQHLKDTKE 337
T KD ++RK E+ K ++ DDD N+L H + +E
Sbjct: 146 TLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFRE 184
>BC022348-1|AAH22348.1| 125|Homo sapiens KIAA1598 protein protein.
Length = 125
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 170 ETAPQRVLVPVNTIIPPTKDKDTEYTPEQRKEEQ 271
+ P VL PV+T P TKD+ E P Q KE++
Sbjct: 69 QAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDE 102
>AK001984-1|BAA92019.1| 125|Homo sapiens protein ( Homo sapiens
cDNA FLJ11122 fis, clone PLACE1006159. ).
Length = 125
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 170 ETAPQRVLVPVNTIIPPTKDKDTEYTPEQRKEEQ 271
+ P VL PV+T P TKD+ E P Q KE++
Sbjct: 69 QAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDE 102
>BC056757-1|AAH56757.1| 628|Homo sapiens solute carrier family 6,
member 18 protein.
Length = 628
Score = 30.3 bits (65), Expect = 6.9
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = -1
Query: 243 YSVSLSFVGGMIVFTGTNTRCGAVSSAARGSL*DLCTRLNVTAFFLSMNFFFVLGIFVLH 64
+S+SL+F GG I F N+ A + L R+ T+ + S+ F VLG +
Sbjct: 263 FSLSLAF-GGHIAFASYNSPRNDCQKDA--VVIALVNRM--TSLYASIAVFSVLGFKATN 317
Query: 63 SYM*CLSNNIMCIIH 19
Y CL NI+ +I+
Sbjct: 318 DYEHCLDRNILSLIN 332
>AK055798-1|BAB71018.1| 628|Homo sapiens protein ( Homo sapiens
cDNA FLJ31236 fis, clone KIDNE2004828, moderately
similar to Mus musculus orphan transporter isoform A12
(Xtrp2) mRNA. ).
Length = 628
Score = 30.3 bits (65), Expect = 6.9
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = -1
Query: 243 YSVSLSFVGGMIVFTGTNTRCGAVSSAARGSL*DLCTRLNVTAFFLSMNFFFVLGIFVLH 64
+S+SL+F GG I F N+ A + L R+ T+ + S+ F VLG +
Sbjct: 263 FSLSLAF-GGHIAFASYNSPRNDCQKDA--VVIALVNRM--TSLYASIAVFSVLGFKATN 317
Query: 63 SYM*CLSNNIMCIIH 19
Y CL NI+ +I+
Sbjct: 318 DYEHCLDRNILSLIN 332
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,056,282
Number of Sequences: 237096
Number of extensions: 1494887
Number of successful extensions: 4202
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4196
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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