Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27c13
(757 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ496103-1|ABF47092.1| 459|Homo sapiens heme carrier protein 1 ... 38 0.039
BC010691-1|AAH10691.1| 431|Homo sapiens SLC46A1 protein protein. 38 0.039
AK054669-1|BAB70789.1| 459|Homo sapiens protein ( Homo sapiens ... 38 0.039
U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein. 33 1.5
U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein. 33 1.5
U13879-1|AAC50115.1| 681|Homo sapiens neuron-restrictive silenc... 33 1.5
BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing transcrip... 33 1.5
BC038985-1|AAH38985.1| 454|Homo sapiens Similar to RE1-silencin... 33 1.5
BC017822-1|AAH17822.1| 460|Homo sapiens Unknown (protein for IM... 33 1.5
BC006242-1|AAH06242.1| 474|Homo sapiens major facilitator super... 33 1.5
AK075376-1|BAC11577.1| 474|Homo sapiens protein ( Homo sapiens ... 33 1.5
AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing transcrip... 33 1.5
AC013256-1|AAF06067.1| 738|Homo sapiens R31155_1 protein. 32 1.9
AF286905-1|AAK60501.1| 763|Homo sapiens enhancer of polycomb 1 ... 31 4.5
CR533529-1|CAG38560.1| 429|Homo sapiens BAF53A protein. 31 5.9
BC036371-1|AAH36371.1| 429|Homo sapiens actin-like 6A protein. 31 5.9
BC015325-1|AAH15325.1| 222|Homo sapiens ZH2C2 protein protein. 31 5.9
BC001391-1|AAH01391.1| 429|Homo sapiens actin-like 6A protein. 31 5.9
BC000949-1|AAH00949.1| 387|Homo sapiens actin-like 6A protein. 31 5.9
AK223212-1|BAD96932.1| 429|Homo sapiens actin-like 6A isoform 1... 31 5.9
AK000132-1|BAA90963.1| 392|Homo sapiens protein ( Homo sapiens ... 31 5.9
AF041474-1|AAC94991.1| 429|Homo sapiens BAF53a protein. 31 5.9
AB061315-1|BAB87848.1| 387|Homo sapiens hArpNbeta-s protein. 31 5.9
AB060168-1|BAB87844.1| 387|Homo sapiens hArpNbeta-s protein. 31 5.9
AB015907-1|BAA74577.1| 429|Homo sapiens actin-related protein h... 31 5.9
>DQ496103-1|ABF47092.1| 459|Homo sapiens heme carrier protein 1
protein.
Length = 459
Score = 37.9 bits (84), Expect = 0.039
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +1
Query: 400 ENVQRLIASVQVWKNVVQTAIPVCVILFVGAWSDKTGKRKACILLPIVGEFLSCLGFIVN 579
+ V+ L + ++ NV + + +GAWSD G+R +L + G L L +
Sbjct: 76 QEVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASL-GLLLQALVSV-- 132
Query: 580 TYFFYELPVEVTAFT-ESIFPAITGGWFTNFIGAFSYVGDITTVENRTYRVGLV 738
F +L + V F I A+ G + +F+ V D+++ +RT+R+ L+
Sbjct: 133 --FVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALL 184
>BC010691-1|AAH10691.1| 431|Homo sapiens SLC46A1 protein protein.
Length = 431
Score = 37.9 bits (84), Expect = 0.039
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +1
Query: 400 ENVQRLIASVQVWKNVVQTAIPVCVILFVGAWSDKTGKRKACILLPIVGEFLSCLGFIVN 579
+ V+ L + ++ NV + + +GAWSD G+R +L + G L L +
Sbjct: 76 QEVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASL-GLLLQALVSV-- 132
Query: 580 TYFFYELPVEVTAFT-ESIFPAITGGWFTNFIGAFSYVGDITTVENRTYRVGLV 738
F +L + V F I A+ G + +F+ V D+++ +RT+R+ L+
Sbjct: 133 --FVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALL 184
>AK054669-1|BAB70789.1| 459|Homo sapiens protein ( Homo sapiens
cDNA FLJ30107 fis, clone BNGH41000198, weakly similar to
TETRACYCLINE RESISTANCE PROTEIN, CLASS E. ).
Length = 459
Score = 37.9 bits (84), Expect = 0.039
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +1
Query: 400 ENVQRLIASVQVWKNVVQTAIPVCVILFVGAWSDKTGKRKACILLPIVGEFLSCLGFIVN 579
+ V+ L + ++ NV + + +GAWSD G+R +L + G L L +
Sbjct: 76 QEVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASL-GLLLQALVSV-- 132
Query: 580 TYFFYELPVEVTAFT-ESIFPAITGGWFTNFIGAFSYVGDITTVENRTYRVGLV 738
F +L + V F I A+ G + +F+ V D+++ +RT+R+ L+
Sbjct: 133 --FVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALL 184
>U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein.
Length = 1088
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 52 IHYRPQKYLLCNTMAVKDLKVCDDEECSKGSHETCPLKSENVREIKKLTFKQRLKLIKDN 231
+H P+++ C K C+ + K H TCP K+ +V ++K K+R + DN
Sbjct: 381 LHVNPRQFN-CPVCDYAASKKCNLQYHFKSKHPTCPNKTMDVSKVKLKKTKKREADLPDN 439
Query: 232 TTVE 243
T E
Sbjct: 440 ITNE 443
>U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein.
Length = 1097
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 52 IHYRPQKYLLCNTMAVKDLKVCDDEECSKGSHETCPLKSENVREIKKLTFKQRLKLIKDN 231
+H P+++ C K C+ + K H TCP K+ +V ++K K+R + DN
Sbjct: 382 LHVNPRQFN-CPVCDYAASKKCNLQYHFKSKHPTCPNKTMDVSKVKLKKTKKREADLPDN 440
Query: 232 TTVE 243
T E
Sbjct: 441 ITNE 444
>U13879-1|AAC50115.1| 681|Homo sapiens neuron-restrictive silencer
factor protein.
Length = 681
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 52 IHYRPQKYLLCNTMAVKDLKVCDDEECSKGSHETCPLKSENVREIKKLTFKQRLKLIKDN 231
+H P+++ C K C+ + K H TCP K+ +V ++K K+R + DN
Sbjct: 464 LHVNPRQFN-CPVCDYAASKKCNLQYHFKSKHPTCPNKTMDVSKVKLKKTKKREADLPDN 522
Query: 232 TTVE 243
T E
Sbjct: 523 ITNE 526
>BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing
transcription factor protein.
Length = 1097
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 52 IHYRPQKYLLCNTMAVKDLKVCDDEECSKGSHETCPLKSENVREIKKLTFKQRLKLIKDN 231
+H P+++ C K C+ + K H TCP K+ +V ++K K+R + DN
Sbjct: 382 LHVNPRQFN-CPVCDYAASKKCNLQYHFKSKHPTCPNKTMDVSKVKLKKTKKREADLPDN 440
Query: 232 TTVE 243
T E
Sbjct: 441 ITNE 444
>BC038985-1|AAH38985.1| 454|Homo sapiens Similar to RE1-silencing
transcription factor protein.
Length = 454
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 52 IHYRPQKYLLCNTMAVKDLKVCDDEECSKGSHETCPLKSENVREIKKLTFKQRLKLIKDN 231
+H P+++ C K C+ + K H TCP K+ +V ++K K+R + DN
Sbjct: 382 LHVNPRQFN-CPVCDYAASKKCNLQYHFKSKHPTCPNKTMDVSKVKLKKTKKREADLPDN 440
Query: 232 TTVE 243
T E
Sbjct: 441 ITNE 444
>BC017822-1|AAH17822.1| 460|Homo sapiens Unknown (protein for
IMAGE:4690075) protein.
Length = 460
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 52 IHYRPQKYLLCNTMAVKDLKVCDDEECSKGSHETCPLKSENVREIKKLTFKQRLKLIKDN 231
+H P+++ C K C+ + K H TCP K+ +V ++K K+R + DN
Sbjct: 382 LHVNPRQFN-CPVCDYAASKKCNLQYHFKSKHPTCPNKTMDVSKVKLKKTKKREADLPDN 440
Query: 232 TTVE 243
T E
Sbjct: 441 ITNE 444
>BC006242-1|AAH06242.1| 474|Homo sapiens major facilitator
superfamily domain containing 9 protein.
Length = 474
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 484 VGAWSDKTGKRK---ACILLPIVGEFLSCLGFIVNTYFFY--ELPVEVTAFTESIFPAI 645
VG WSD G+R ACILL +G L LG N + F +P + T SI A+
Sbjct: 99 VGCWSDVVGRRSSLLACILLSALGYLL--LGAATNVFLFVLARVPAGIFKHTLSISRAL 155
>AK075376-1|BAC11577.1| 474|Homo sapiens protein ( Homo sapiens
cDNA PSEC0066 fis, clone NT2RP2001087, weakly similar to
TETRACYCLINE RESISTANCE PROTEIN. ).
Length = 474
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 484 VGAWSDKTGKRK---ACILLPIVGEFLSCLGFIVNTYFFY--ELPVEVTAFTESIFPAI 645
VG WSD G+R ACILL +G L LG N + F +P + T SI A+
Sbjct: 99 VGCWSDVVGRRSSLLACILLSALGYLL--LGAATNVFLFVLARVPAGIFKHTLSISRAL 155
>AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing
transcription factor variant protein.
Length = 1126
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 52 IHYRPQKYLLCNTMAVKDLKVCDDEECSKGSHETCPLKSENVREIKKLTFKQRLKLIKDN 231
+H P+++ C K C+ + K H TCP K+ +V ++K K+R + DN
Sbjct: 411 LHVNPRQFN-CPVCDYAASKKCNLQYHFKSKHPTCPNKTMDVSKVKLKKTKKREADLPDN 469
Query: 232 TTVE 243
T E
Sbjct: 470 ITNE 473
>AC013256-1|AAF06067.1| 738|Homo sapiens R31155_1 protein.
Length = 738
Score = 32.3 bits (70), Expect = 1.9
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -3
Query: 209 RCLNVSFFISRTFS---DFNGHVS*DPFEHSSSSQTFRSLTAIVLHNRYFCGR 60
+C + SR+FS N H PFE S+ + FR +++I+LH R G+
Sbjct: 273 KCNDCGKTFSRSFSLKLHQNIHTGEKPFECSNCRKAFRQISSILLHQRIHSGK 325
>AF286905-1|AAK60501.1| 763|Homo sapiens enhancer of polycomb 1
protein.
Length = 763
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 165 IRKRSRNKKAYIQTTIEINKR*HNRGAYNG 254
I++R R+K+ + T+EI ++ +N G YNG
Sbjct: 201 IKRRERSKRELLHLTLEIMEKRYNLGDYNG 230
>CR533529-1|CAG38560.1| 429|Homo sapiens BAF53A protein.
Length = 429
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 REIKKLTF-KQRLKLIKDNTTVEPIMACYVMPSVLASL 288
RE+ + T RLKLI +NTTVE + ++ S+LASL
Sbjct: 366 RELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASL 403
>BC036371-1|AAH36371.1| 429|Homo sapiens actin-like 6A protein.
Length = 429
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 REIKKLTF-KQRLKLIKDNTTVEPIMACYVMPSVLASL 288
RE+ + T RLKLI +NTTVE + ++ S+LASL
Sbjct: 366 RELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASL 403
>BC015325-1|AAH15325.1| 222|Homo sapiens ZH2C2 protein protein.
Length = 222
Score = 30.7 bits (66), Expect = 5.9
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = -3
Query: 611 TSTGNS*KKYVFTMKPKQ-DKNSPTIGSKMHA------FLLPVLSLHAP--TNNITHTGI 459
TS N K++V+ + Q KN+ + K H + L + L P T+N +H
Sbjct: 102 TSVTNDVKQWVYACQHCQVAKNTVIVAPKQHLLKVENPWSLVTVDLMGPFHTSNRSHVYA 161
Query: 458 AVCTTFFQTWTLAISLCTFSSASV 387
+ T F W + + LC S++ V
Sbjct: 162 IIMTDLFTKWIVILPLCDVSASEV 185
>BC001391-1|AAH01391.1| 429|Homo sapiens actin-like 6A protein.
Length = 429
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 REIKKLTF-KQRLKLIKDNTTVEPIMACYVMPSVLASL 288
RE+ + T RLKLI +NTTVE + ++ S+LASL
Sbjct: 366 RELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASL 403
>BC000949-1|AAH00949.1| 387|Homo sapiens actin-like 6A protein.
Length = 387
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 REIKKLTF-KQRLKLIKDNTTVEPIMACYVMPSVLASL 288
RE+ + T RLKLI +NTTVE + ++ S+LASL
Sbjct: 324 RELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASL 361
>AK223212-1|BAD96932.1| 429|Homo sapiens actin-like 6A isoform 1
variant protein.
Length = 429
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 REIKKLTF-KQRLKLIKDNTTVEPIMACYVMPSVLASL 288
RE+ + T RLKLI +NTTVE + ++ S+LASL
Sbjct: 366 RELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASL 403
>AK000132-1|BAA90963.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ20125 fis, clone COL06152. ).
Length = 392
Score = 30.7 bits (66), Expect = 5.9
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = -3
Query: 611 TSTGNS*KKYVFTMKPKQ-DKNSPTIGSKMHA------FLLPVLSLHAP--TNNITHTGI 459
TS N K++V+ + Q KN+ + K H + L + L P T+N +H
Sbjct: 102 TSVTNDAKQWVYACQHCQVAKNTVIVAPKQHLLKVENPWSLVTVDLMGPFHTSNRSHVYA 161
Query: 458 AVCTTFFQTWTLAISLCTFSSASV 387
+ T F W + + LC S++ V
Sbjct: 162 IIMTDLFTKWIVILPLCDVSASEV 185
>AF041474-1|AAC94991.1| 429|Homo sapiens BAF53a protein.
Length = 429
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 REIKKLTF-KQRLKLIKDNTTVEPIMACYVMPSVLASL 288
RE+ + T RLKLI +NTTVE + ++ S+LASL
Sbjct: 366 RELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASL 403
>AB061315-1|BAB87848.1| 387|Homo sapiens hArpNbeta-s protein.
Length = 387
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 REIKKLTF-KQRLKLIKDNTTVEPIMACYVMPSVLASL 288
RE+ + T RLKLI +NTTVE + ++ S+LASL
Sbjct: 324 RELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASL 361
>AB060168-1|BAB87844.1| 387|Homo sapiens hArpNbeta-s protein.
Length = 387
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 REIKKLTF-KQRLKLIKDNTTVEPIMACYVMPSVLASL 288
RE+ + T RLKLI +NTTVE + ++ S+LASL
Sbjct: 324 RELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASL 361
>AB015907-1|BAA74577.1| 429|Homo sapiens actin-related protein
hArpN beta protein.
Length = 429
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 REIKKLTF-KQRLKLIKDNTTVEPIMACYVMPSVLASL 288
RE+ + T RLKLI +NTTVE + ++ S+LASL
Sbjct: 366 RELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASL 403
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,430,915
Number of Sequences: 237096
Number of extensions: 2472508
Number of successful extensions: 5606
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5594
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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