Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt27c11
         (673 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058339-1|AAL13568.1|  502|Drosophila melanogaster GH11341p pro...   238   4e-63
AF145315-1|AAF08383.1|  502|Drosophila melanogaster hypothetical...   238   4e-63
AE014297-357|AAF51952.1|  502|Drosophila melanogaster CG1100-PA ...   238   4e-63

>AY058339-1|AAL13568.1|  502|Drosophila melanogaster GH11341p
           protein.
          Length = 502

 Score =  238 bits (583), Expect = 4e-63
 Identities = 114/175 (65%), Positives = 144/175 (82%), Gaps = 2/175 (1%)
 Frame = +3

Query: 144 GKIIKMEVDYSATCDEKLPLWKSWAAQGK--IQEAIDQLLALEKQTRTGADMVSTSRILV 317
           G+I KMEVDY   C+EK+PL K  A +      EAI+ +L LEKQTR GADMVS SR+LV
Sbjct: 9   GRITKMEVDYEPACNEKIPLAKELAKKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLV 68

Query: 318 TVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKIKLIETL 497
            + QI F+A NW+ALN+++ +L +RRSQLKQAVVKM+QEC TYVDKTPDKETK+KLI+TL
Sbjct: 69  AICQICFDASNWNALNEYVSLLVRRRSQLKQAVVKMIQECVTYVDKTPDKETKLKLIDTL 128

Query: 498 RTITEGKIYVEVERARLTHILAKIREEEGNVAEAAKIIQELQVETYGSMDRGKKL 662
           R++TEGKIYVE+ERARLT ILA I+E +G+VA AA +++ELQVETYGSMD+ +K+
Sbjct: 129 RSVTEGKIYVEIERARLTKILADIKEADGDVAGAATVMEELQVETYGSMDKREKV 183


>AF145315-1|AAF08383.1|  502|Drosophila melanogaster hypothetical
           55kDa protein protein.
          Length = 502

 Score =  238 bits (583), Expect = 4e-63
 Identities = 114/175 (65%), Positives = 144/175 (82%), Gaps = 2/175 (1%)
 Frame = +3

Query: 144 GKIIKMEVDYSATCDEKLPLWKSWAAQGK--IQEAIDQLLALEKQTRTGADMVSTSRILV 317
           G+I KMEVDY   C+EK+PL K  A +      EAI+ +L LEKQTR GADMVS SR+LV
Sbjct: 9   GRITKMEVDYEPACNEKIPLAKELAKKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLV 68

Query: 318 TVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKIKLIETL 497
            + QI F+A NW+ALN+++ +L +RRSQLKQAVVKM+QEC TYVDKTPDKETK+KLI+TL
Sbjct: 69  AICQICFDASNWNALNEYVSLLVRRRSQLKQAVVKMIQECVTYVDKTPDKETKLKLIDTL 128

Query: 498 RTITEGKIYVEVERARLTHILAKIREEEGNVAEAAKIIQELQVETYGSMDRGKKL 662
           R++TEGKIYVE+ERARLT ILA I+E +G+VA AA +++ELQVETYGSMD+ +K+
Sbjct: 129 RSVTEGKIYVEIERARLTKILADIKEADGDVAGAATVMEELQVETYGSMDKREKV 183


>AE014297-357|AAF51952.1|  502|Drosophila melanogaster CG1100-PA
           protein.
          Length = 502

 Score =  238 bits (583), Expect = 4e-63
 Identities = 114/175 (65%), Positives = 144/175 (82%), Gaps = 2/175 (1%)
 Frame = +3

Query: 144 GKIIKMEVDYSATCDEKLPLWKSWAAQGK--IQEAIDQLLALEKQTRTGADMVSTSRILV 317
           G+I KMEVDY   C+EK+PL K  A +      EAI+ +L LEKQTR GADMVS SR+LV
Sbjct: 9   GRITKMEVDYEPACNEKIPLAKELAKKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLV 68

Query: 318 TVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKIKLIETL 497
            + QI F+A NW+ALN+++ +L +RRSQLKQAVVKM+QEC TYVDKTPDKETK+KLI+TL
Sbjct: 69  AICQICFDASNWNALNEYVSLLVRRRSQLKQAVVKMIQECVTYVDKTPDKETKLKLIDTL 128

Query: 498 RTITEGKIYVEVERARLTHILAKIREEEGNVAEAAKIIQELQVETYGSMDRGKKL 662
           R++TEGKIYVE+ERARLT ILA I+E +G+VA AA +++ELQVETYGSMD+ +K+
Sbjct: 129 RSVTEGKIYVEIERARLTKILADIKEADGDVAGAATVMEELQVETYGSMDKREKV 183


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,958,187
Number of Sequences: 53049
Number of extensions: 520762
Number of successful extensions: 1352
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)