Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27c10
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 33 0.21
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 32 0.36
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 32 0.36
Z82067-1|CAB63317.1| 794|Caenorhabditis elegans Hypothetical pr... 32 0.48
U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 31 1.1
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 31 1.1
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC199172-3|ABO33274.1| 306|Caenorhabditis elegans F-box a prote... 30 1.5
AL110484-3|CAB54394.1| 243|Caenorhabditis elegans Hypothetical ... 30 1.9
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr... 29 2.6
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 29 2.6
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 29 2.6
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 29 3.4
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC024817-6|AAY86298.2| 488|Caenorhabditis elegans Hypothetical ... 29 4.5
Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical... 28 7.8
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 33.1 bits (72), Expect = 0.21
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Frame = +3
Query: 285 EKRMQVPIIPLSKVYVRVSAATGVSERTVLNIAREARLVEQGLLDPETLKKSPKKRVRTK 464
+K+MQ I R AA E V I + VE+ L D + KK +T
Sbjct: 5 KKKMQAMKIEKDNALDRADAA----EEKVRQITEKLERVEEELRDTQ------KKMTQTG 54
Query: 465 GKIEVDEYDLQVIRRKIHE----FYAFKKEVPTINKLLQILKEEINFKGSRET 611
++ + DL K+ E + EV ++N+ + +L+EE+NF R T
Sbjct: 55 DDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELNFSPRRLT 107
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 435 KSPKKRVRTKGKIEVDEYDLQVIRRKIHEFYAFKKEV-PTINKLLQILKEEINFKGSRET 611
K + ++ + K++ E DLQ +R+ E A KKE+ +N++L+ L + + +
Sbjct: 812 KENRSQIEMEHKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDK 871
Query: 612 LRKILRKNGFQFRK 653
+ LR+ F K
Sbjct: 872 MLTQLREEAFAKEK 885
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 435 KSPKKRVRTKGKIEVDEYDLQVIRRKIHEFYAFKKEV-PTINKLLQILKEEINFKGSRET 611
K + ++ + K++ E DLQ +R+ E A KKE+ +N++L+ L + + +
Sbjct: 824 KENRSQIEMEHKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDK 883
Query: 612 LRKILRKNGFQFRK 653
+ LR+ F K
Sbjct: 884 MLTQLREEAFAKEK 897
>Z82067-1|CAB63317.1| 794|Caenorhabditis elegans Hypothetical
protein W03H9.1 protein.
Length = 794
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 429 LKKSPKKRVRTKGKIEVDEYDLQVIRRKIHEFYAFK--KEVPTINKLLQILKEEINFK 596
L SPK+ + K K+ + E L++ R IHEF F+ ++N L L N+K
Sbjct: 236 LLMSPKETLIFKAKLHLSEDSLKMSRSLIHEFLGFRVLASKDSVNNLKHSLSTVDNYK 293
>U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical
protein K07C11.9 protein.
Length = 642
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 372 LNIAREARLVEQGLLDPETLKKSPKKRVRTKGKIEVDEYD---LQVIRRKIHEFYAFKKE 542
LN+ E + + +L+P ++ R K IEV + L VIR I E AFKK+
Sbjct: 430 LNLLLEPERIYEYVLEP-LIQTVQLSATRLKSDIEVSVFTINCLTVIRSAISEISAFKKK 488
Query: 543 VPTINKLLQ 569
+ I+ +++
Sbjct: 489 IEMIDAMIE 497
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Frame = +3
Query: 291 RMQVPIIPL-SKVYVRVSAATGVSERTVLNIAREARLVEQGLLDPETLKKSPKKRVRTKG 467
R Q+ + + S++ R+ E T N R + Q L+ ET +K ++ +R K
Sbjct: 1573 RAQIEVSQIRSEIEKRIQEKEEEFENTRRNHQRALESM-QATLEAETKQK--EEALRIKK 1629
Query: 468 KIEVDEYDLQVIRRKIHEFYAFKKEVPTINKLLQILKEEINFKGSRETLRKILRKNGFQF 647
K+E D DL++ + YA ++ TI K ++ + +E+ F+ E +K + F
Sbjct: 1630 KLESDINDLEIALDHANRAYADAQK--TIKKYMETV-QELQFQIEEEQRQKDEIREQFLA 1686
Query: 648 RKTKN---NKDKEQAPQQ 692
+ +N +K++ QQ
Sbjct: 1687 SEKRNAILQSEKDELAQQ 1704
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Frame = +3
Query: 291 RMQVPIIPL-SKVYVRVSAATGVSERTVLNIAREARLVEQGLLDPETLKKSPKKRVRTKG 467
R Q+ + + S++ R+ E T N R + Q L+ ET +K ++ +R K
Sbjct: 1573 RAQIEVSQIRSEIEKRIQEKEEEFENTRRNHQRALESM-QATLEAETKQK--EEALRIKK 1629
Query: 468 KIEVDEYDLQVIRRKIHEFYAFKKEVPTINKLLQILKEEINFKGSRETLRKILRKNGFQF 647
K+E D DL++ + YA ++ TI K ++ + +E+ F+ E +K + F
Sbjct: 1630 KLESDINDLEIALDHANRAYADAQK--TIKKYMETV-QELQFQIEEEQRQKDEIREQFLA 1686
Query: 648 RKTKN---NKDKEQAPQQ 692
+ +N +K++ QQ
Sbjct: 1687 SEKRNAILQSEKDELAQQ 1704
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 519 EFYAFKKEVPTINKLLQILKEEINFKGSRETLRKILRKNGFQF-RKTKNNKDKEQ 680
E Y F+K++ +K L+ LK ++ + R+I +++GF+ RK++ N E+
Sbjct: 530 EEYIFEKDMDRYSKALESLKATVSSQAKTGGSRQIAKRSGFEAKRKSRPNARGEK 584
>AC199172-3|ABO33274.1| 306|Caenorhabditis elegans F-box a protein
protein 31 protein.
Length = 306
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +3
Query: 489 DLQVIRRKIHEFYAFKKEV---PTINKLLQILKEEINFKGSRETL 614
DL+++ + + + Y +KE T+N L+ +LKEE+N TL
Sbjct: 102 DLKILLKNVSKLYILRKERYRHNTVNFLVNVLKEEVNIHVDTITL 146
>AL110484-3|CAB54394.1| 243|Caenorhabditis elegans Hypothetical
protein Y38E10A.3 protein.
Length = 243
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 468 KIEVDEYDLQVIRRKIHEFYAFKKEVPTINKLLQILKEEINFKGSR 605
K+EV+ +R + E + K+E+ ++ K + +LKEEI +GS+
Sbjct: 39 KLEVEALGNLPAQRNLSEDIS-KREIQSLKKQVTVLKEEIGLEGSK 83
>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical protein
ZK970.6 protein.
Length = 1122
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 225 KNITSEVREIILKVKEFMDEEKRMQVPIIPLSKVYVRVSAATG 353
KN + +++I+ +FMD K +VP +P KV +R+ +G
Sbjct: 948 KNGYAHIKQIVDMSLKFMDYCKSFKVPHLPREKVELRIGINSG 990
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 676 SLSLLFFVFLNWKPFLRSILRKVSLEPLKFI 584
+L +F LNW PF + R V L P+ F+
Sbjct: 93 NLYFIFIAILNWVPFFDAYTRYVGLIPICFV 123
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 676 SLSLLFFVFLNWKPFLRSILRKVSLEPLKFI 584
+L +F LNW PF + R V L P+ F+
Sbjct: 93 NLYFIFIAILNWVPFFDAYTRYVGLIPICFV 123
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
ZK512.5 protein.
Length = 1232
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 594 KGSRETLRKILRKNGFQFRKTKNNKDKEQAPQQPTSVPPMVPP 722
K S +LR ++G R ++ QAP T +PPM+PP
Sbjct: 1151 KSSTNSLRSA--RSGVGSRYLQSGMATSQAPAMDTGMPPMMPP 1191
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 29.1 bits (62), Expect = 3.4
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Frame = +3
Query: 282 EEKRMQVPIIPLSKVYVRVSAATGVSERTVLNIAREARLVEQGLLDPETLKKSPKKRVRT 461
EEK+ + + ++ + +S + ER L R+ V Q L K ++R R
Sbjct: 380 EEKKRENERVRQEEIAMEISKIREL-ERLQLERQRKNERVRQELEAARKYKLQEEERQR- 437
Query: 462 KGKIEVDEYDLQVIRRK--IHEFYAFKKEVPTINKLLQILKEEINFKGSRETLRKILRKN 635
KI+ + +++ IR++ + E +L ++ +EE+ R+ +ILR+
Sbjct: 438 --KIQQQKVEMEQIRQQEEARQEQLRVLEEERARELERVRQEELE----RQHQMEILRQQ 491
Query: 636 GFQFRKTKNNKDKEQAPQQ 692
+K K KD+EQ QQ
Sbjct: 492 EEDQKKKKLEKDREQREQQ 510
>AC024817-6|AAY86298.2| 488|Caenorhabditis elegans Hypothetical
protein Y54G2A.42 protein.
Length = 488
Score = 28.7 bits (61), Expect = 4.5
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +3
Query: 336 VSAATGVSERTVLNIAREARLVEQGLLDPETLKKSPKKRVRTKGKIEVDEYDLQVIRRKI 515
V++ G+S TV + R+ E+ PE K S K+R+ + DE ++
Sbjct: 73 VASLLGISSITVYR--KRKRIGEE---KPEKEKISKKQRILN---MVTDEQRKEIFD--- 121
Query: 516 HEFYAFKKEVP-TINKLLQILKEEINFKGSRETLRKILRKNGFQFR-KTKN 662
H F+ + T++ LL LKE NF+ R +L +LR ++ KT N
Sbjct: 122 HVQECFRTDTNFTLSTLLVDLKERFNFQYGRSSLHDLLRAMDLVYKVKTYN 172
>Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = -1
Query: 341 RNSNINFTQRNY---RNLHSF--LFVHKLFHF*YYFAHFTSYVFRHF 216
+++ IN T N+ N H+ +F K+FHF +Y+ + Y++ F
Sbjct: 70 QSNGINETLSNFFLTHNEHNMEVIFPVKVFHFLHYYFAYAQYIYNFF 116
>Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = -1
Query: 341 RNSNINFTQRNY---RNLHSF--LFVHKLFHF*YYFAHFTSYVFRHF 216
+++ IN T N+ N H+ +F K+FHF +Y+ + Y++ F
Sbjct: 70 QSNGINETLSNFFLTHNEHNMEVIFPVKVFHFLHYYFAYAQYIYNFF 116
>AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical
protein F32D1.7 protein.
Length = 301
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 591 FKGSRETLRKILRKNGFQFRKTKNNKDKEQAPQQPTSVPPMVPP 722
F+G T+ +R+ +FRK + + A Q SV + PP
Sbjct: 40 FRGRSSTVTDAVRQTAMEFRKRARSDEFRPAQQPEQSVVAVKPP 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,029,278
Number of Sequences: 27780
Number of extensions: 256429
Number of successful extensions: 944
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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