Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27c08
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025727-8|AAG23390.2| 223|Caenorhabditis elegans Hypothetical ... 83 2e-16
AC025727-9|ABD63208.1| 146|Caenorhabditis elegans Hypothetical ... 56 2e-08
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 29 3.9
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 29 3.9
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z70266-3|CAA94207.1| 71|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 28 5.2
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 5.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.2
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 6.8
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 6.8
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 28 6.8
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 28 6.8
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 28 6.8
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 28 6.8
Z99288-8|CAB16550.1| 231|Caenorhabditis elegans Hypothetical pr... 27 9.1
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 27 9.1
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 27 9.1
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 27 9.1
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 27 9.1
>AC025727-8|AAG23390.2| 223|Caenorhabditis elegans Hypothetical
protein Y73E7A.1a protein.
Length = 223
Score = 82.6 bits (195), Expect = 2e-16
Identities = 56/184 (30%), Positives = 78/184 (42%), Gaps = 7/184 (3%)
Frame = +1
Query: 127 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDNXXXXXXXXXXXXXXXXXX 306
MPKKF EN K AAR RK AK ++ K KA EDA+W DN
Sbjct: 1 MPKKFASENPKVTAARDRKATAKKDEADKKAKATEDAKWVDNDKLNNRKMQRKEDDEKKR 60
Query: 307 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAQISQAKEKMAK-----PETAKPV 471
RA I KE + E K
Sbjct: 61 EEALRRKEENRKLAEEEMSSLGNKKPAGAATQKVTRAHIHIRKEDEERINRELEEKRKQE 120
Query: 472 PSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVD--RHPEKRLKAAFTAFEQ 645
K+ + L ENLN+++++ A+ VD+AL +L ++ +D +HPEKR++AA+ AFE+
Sbjct: 121 AQKIEVAGDLLVENLNKLEVEEGEARNVDDALKVLGEEKALDDDKHPEKRMRAAYLAFEE 180
Query: 646 INLP 657
LP
Sbjct: 181 ARLP 184
>AC025727-9|ABD63208.1| 146|Caenorhabditis elegans Hypothetical
protein Y73E7A.1b protein.
Length = 146
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Frame = +1
Query: 454 ETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVD--RHPEKRLKAA 627
E K K+ + L ENLN+++++ A+ VD+AL +L ++ +D +HPEKR++AA
Sbjct: 38 EKRKQEAQKIEVAGDLLVENLNKLEVEEGEARNVDDALKVLGEEKALDDDKHPEKRMRAA 97
Query: 628 FTAFEQINLP 657
+ AFE+ LP
Sbjct: 98 YLAFEEARLP 107
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 463 KPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEK 612
K VPS V E+P EE+ L G +Q E S +PE+ HP K
Sbjct: 307 KAVPSTAVSEKP--EESRESSSLGGSWSQQDTEPSERSSVEPEILEHPVK 354
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 463 KPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEK 612
K VPS V E+P EE+ L G +Q E S +PE+ HP K
Sbjct: 307 KAVPSTAVSEKP--EESRESSSLGGSWSQQDTEPSERSSVEPEILEHPVK 354
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 463 KPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEK 612
K VPS V E+P EE+ L G +Q E S +PE+ HP K
Sbjct: 307 KAVPSTAVSEKP--EESRESSSLGGSWSQQDTEPSERSSVEPEILEHPVK 354
>Z70266-3|CAA94207.1| 71|Caenorhabditis elegans Hypothetical
protein C40C9.4 protein.
Length = 71
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 127 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWED 249
MP FT + +V Q +EN +L +QK K V+ +ED
Sbjct: 1 MPPFFTEKLQGSVEELQNQENEELTIEQKKKAGVDQNYFED 41
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 421 ISQAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQT 552
++Q + + + E AKP + +EPP E +I L G+L ++
Sbjct: 584 VTQPEMEPSSSEPAKPAKPSITKKEPPSETMSAKISLIGDLQKS 627
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 154 SKAVAARQRKENAKLEKDQKTKKAVED 234
S+ A + ++ +KLE + KTKK +ED
Sbjct: 10044 SEIAAKKSAEQKSKLETEAKTKKVIED 10070
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 154 SKAVAARQRKENAKLEKDQKTKKAVED 234
S+ A + ++ +KLE + KTKK +ED
Sbjct: 10064 SEIAAKKSAEQKSKLETEAKTKKVIED 10090
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 154 SKAVAARQRKENAKLEKDQKTKKAVED 234
S+ A + ++ +KLE + KTKK +ED
Sbjct: 10064 SEIAAKKSAEQKSKLETEAKTKKVIED 10090
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 148 ENSKAVAARQRKENAKLEKDQKTKKAVED 234
+ S AV + RK+N K +K +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 148 ENSKAVAARQRKENAKLEKDQKTKKAVED 234
+ S AV + RK+N K +K +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 148 ENSKAVAARQRKENAKLEKDQKTKKAVED 234
+ S AV + RK+N K +K +++KAVE+
Sbjct: 397 DESTAVTSENRKKNKKDKKKSESEKAVEE 425
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 148 ENSKAVAARQRKENAKLEKDQKTKKAVED 234
+ S AV + RK+N K +K +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 148 ENSKAVAARQRKENAKLEKDQKTKKAVED 234
+ S AV + RK+N K +K +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 148 ENSKAVAARQRKENAKLEKDQKTKKAVED 234
+ S AV + RK+N K +K +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 421 ISQAKEKMAK-PETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVD 597
+ +A EK+ K P++ + P+K ++PPL++ ++DG + + + S PE
Sbjct: 1471 VEKAVEKVEKKPKSPQKPPAKPTAQKPPLKKT---EEVDGIEREASESSSKESSVAPEEK 1527
Query: 598 RHPEK 612
++P+K
Sbjct: 1528 KNPKK 1532
>Z99288-8|CAB16550.1| 231|Caenorhabditis elegans Hypothetical
protein ZK262.9 protein.
Length = 231
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 433 KEKMAKPETAKPVPSKVVIEEPPL 504
+EK A ET +P P+ +++ PP+
Sbjct: 3 REKAASVETIRPTPANSIVKAPPV 26
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 463 KPVPSKVVIEEPPLEENLNRIQLDGELAQTV-DEALA 570
K P K +I+ PPL E + + L E Q + DEALA
Sbjct: 155 KNKPKKAIIQPPPLLEIYSPVGLTAEEEQRLNDEALA 191
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 148 ENSKAVAARQRKENAKLEKDQKTKKAVEDAE 240
E+ + A R+R++ + KD++ +KA DAE
Sbjct: 21 EDERQFAERRRQDEERRRKDEEDRKAKADAE 51
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 148 ENSKAVAARQRKENAKLEKDQKTKKAVEDAE 240
E+ + A R+R++ + KD++ +KA DAE
Sbjct: 125 EDERQFAERRRQDEERRRKDEEDRKAKADAE 155
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 421 ISQAKEKMAK-PETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVD 597
+ +A EK+ K P++ + P+K + PPL++ ++DG + + + S PE
Sbjct: 1450 VEKAVEKVEKKPKSPQKPPAKPTAQNPPLKKT---EEVDGIEREASESSSKESSVAPEEK 1506
Query: 598 RHPEK 612
++P+K
Sbjct: 1507 KNPKK 1511
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,865,609
Number of Sequences: 27780
Number of extensions: 210223
Number of successful extensions: 886
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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