SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt27b23
         (664 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021260-1|AAX33408.1|  314|Drosophila melanogaster RE55455p pro...   203   2e-52
AE014296-1673|AAF50255.1|  314|Drosophila melanogaster CG3428-PA...   203   2e-52
AY061416-1|AAL28964.1|  265|Drosophila melanogaster LD34623p pro...   161   6e-40
AY060879-1|AAL28427.1|  603|Drosophila melanogaster GM04147p pro...   133   2e-31
AE013599-1033|AAF58839.1|  603|Drosophila melanogaster CG11866-P...   133   2e-31
BT001595-1|AAN71350.1|  559|Drosophila melanogaster RE28319p pro...    30   2.4  
AY069210-1|AAL39355.1|  511|Drosophila melanogaster GH26184p pro...    30   2.4  
AE014297-4385|AAF56899.2|  515|Drosophila melanogaster CG2010-PA...    30   2.4  
AE014297-4384|AAN14173.1|  511|Drosophila melanogaster CG2010-PB...    30   2.4  
AY094734-1|AAM11087.1| 2114|Drosophila melanogaster GH26789p pro...    30   3.2  
AE014296-2803|AAO41243.1| 2114|Drosophila melanogaster CG9674-PD...    30   3.2  
AE014296-2802|AAF49409.2| 2114|Drosophila melanogaster CG9674-PA...    30   3.2  
BT010305-1|AAQ23623.1| 1124|Drosophila melanogaster GM01353p pro...    29   7.5  
AY075203-1|AAL68071.1|  571|Drosophila melanogaster AT14039p pro...    29   7.5  
AE014297-1050|AAF54459.1| 1182|Drosophila melanogaster CG9461-PA...    29   7.5  
AE014296-2911|AAF49341.1|  571|Drosophila melanogaster CG12229-P...    29   7.5  
X54061-1|CAA37996.1| 1163|Drosophila melanogaster 205 K microtub...    28   9.9  
BT003276-1|AAO25033.1| 1163|Drosophila melanogaster LD12965p pro...    28   9.9  
BT001567-1|AAN71322.1|  188|Drosophila melanogaster RE18604p pro...    28   9.9  
AY061481-1|AAL29029.1|  208|Drosophila melanogaster LD44733p pro...    28   9.9  
AE014297-4842|AAN14301.1| 1185|Drosophila melanogaster CG1483-PB...    28   9.9  
AE014297-4841|AAF57214.1| 1163|Drosophila melanogaster CG1483-PA...    28   9.9  
AE013599-2698|AAF57690.1|  355|Drosophila melanogaster CG5174-PB...    28   9.9  
AE013599-2696|AAM68456.1|  188|Drosophila melanogaster CG5174-PH...    28   9.9  
AE013599-2695|AAM68455.1|  208|Drosophila melanogaster CG5174-PA...    28   9.9  
AE013599-2694|AAM68454.1|  201|Drosophila melanogaster CG5174-PI...    28   9.9  

>BT021260-1|AAX33408.1|  314|Drosophila melanogaster RE55455p
           protein.
          Length = 314

 Score =  203 bits (495), Expect = 2e-52
 Identities = 98/168 (58%), Positives = 123/168 (73%)
 Frame = +1

Query: 127 MEFLDLPLVMIENIFSYFSHDEIAKNRLVCRTFNEICSRMLNRGFLMIERRHAMALKTVK 306
           M  LDLP  +I++I     +DE+AK R VC  FN +  ++LN+GF  I   HA   K +K
Sbjct: 1   MNLLDLPQTLIQDILELLPYDEVAKKREVCTLFNYLGQQILNKGFNKIIMAHAKNFKRIK 60

Query: 307 AQLPRRESERRHHPLSRHCDILTSIETRISMLSMTYSKYIDTGMCCFIPGKVIDEIKRVL 486
           + LPRRESERR+H LSRH DILTSIETRISML+MTYSK+ID  +CCFIPG+V+DEI  +L
Sbjct: 61  SMLPRRESERRNHILSRHSDILTSIETRISMLTMTYSKFIDLNICCFIPGRVLDEINSIL 120

Query: 487 TILDTSATPPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQ 630
            IL TS    R HEVLQELRDISSMAIEHFD+KI+  F+   ++ +A+
Sbjct: 121 RILSTSTKQLRPHEVLQELRDISSMAIEHFDEKIAVNFKLEHRKQLAE 168


>AE014296-1673|AAF50255.1|  314|Drosophila melanogaster CG3428-PA
           protein.
          Length = 314

 Score =  203 bits (495), Expect = 2e-52
 Identities = 98/168 (58%), Positives = 123/168 (73%)
 Frame = +1

Query: 127 MEFLDLPLVMIENIFSYFSHDEIAKNRLVCRTFNEICSRMLNRGFLMIERRHAMALKTVK 306
           M  LDLP  +I++I     +DE+AK R VC  FN +  ++LN+GF  I   HA   K +K
Sbjct: 1   MNLLDLPQTLIQDILELLPYDEVAKKREVCTLFNYLGQQILNKGFNKIIMAHAKNFKRIK 60

Query: 307 AQLPRRESERRHHPLSRHCDILTSIETRISMLSMTYSKYIDTGMCCFIPGKVIDEIKRVL 486
           + LPRRESERR+H LSRH DILTSIETRISML+MTYSK+ID  +CCFIPG+V+DEI  +L
Sbjct: 61  SMLPRRESERRNHILSRHSDILTSIETRISMLTMTYSKFIDLNICCFIPGRVLDEINSIL 120

Query: 487 TILDTSATPPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQ 630
            IL TS    R HEVLQELRDISSMAIEHFD+KI+  F+   ++ +A+
Sbjct: 121 RILSTSTKQLRPHEVLQELRDISSMAIEHFDEKIAVNFKLEHRKQLAE 168


>AY061416-1|AAL28964.1|  265|Drosophila melanogaster LD34623p
           protein.
          Length = 265

 Score =  161 bits (392), Expect = 6e-40
 Identities = 77/117 (65%), Positives = 93/117 (79%)
 Frame = +1

Query: 280 HAMALKTVKAQLPRRESERRHHPLSRHCDILTSIETRISMLSMTYSKYIDTGMCCFIPGK 459
           HA   K +K+ LPRRESERR+H LSRH DILTSIETRISML+MTYSK+ID  +CCFIPG+
Sbjct: 3   HAKNFKRIKSMLPRRESERRNHILSRHSDILTSIETRISMLTMTYSKFIDLNICCFIPGR 62

Query: 460 VIDEIKRVLTILDTSATPPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQ 630
           V+DEI  +L IL TS    R HEVLQELRDISSMAIEHFD+KI+  F+   ++ +A+
Sbjct: 63  VLDEINSILRILSTSTKQLRPHEVLQELRDISSMAIEHFDEKIAVNFKLEHRKQLAE 119


>AY060879-1|AAL28427.1|  603|Drosophila melanogaster GM04147p
           protein.
          Length = 603

 Score =  133 bits (322), Expect = 2e-31
 Identities = 63/179 (35%), Positives = 100/179 (55%)
 Frame = +1

Query: 52  KIYEYTLILVHGLVVTELLFLYRDKMEFLDLPLVMIENIFSYFSHDEIAKNRLVCRTFNE 231
           +++ YT+ +      T             DLP  +IE I SY  + +++  RLV    N+
Sbjct: 95  RLHSYTMQMQRQRPPTATTTTTTSAPSLYDLPNELIEKILSYVDYKKVSNLRLVSHRMND 154

Query: 232 ICSRMLNRGFLMIERRHAMALKTVKAQLPRRESERRHHPLSRHCDILTSIETRISMLSMT 411
           IC  MLN  F    +      + +KA +PRRES RR+HPL+  CDI+ +   R+S+L M+
Sbjct: 155 ICMAMLNTAFTKQIKTTLSRFQAIKASMPRRESHRRNHPLACECDIIETCYMRLSLLQMS 214

Query: 412 YSKYIDTGMCCFIPGKVIDEIKRVLTILDTSATPPRAHEVLQELRDISSMAIEHFDDKI 588
             K+I+ G CCF PG ++DE++ +L  +  +    R + V  EL D+S+MA+E+F D+I
Sbjct: 215 MGKHIERGHCCFFPGAILDEVQAILNYISITPRLQRPYRVTDELFDLSTMAMEYFKDRI 273


>AE013599-1033|AAF58839.1|  603|Drosophila melanogaster CG11866-PA
           protein.
          Length = 603

 Score =  133 bits (322), Expect = 2e-31
 Identities = 63/179 (35%), Positives = 100/179 (55%)
 Frame = +1

Query: 52  KIYEYTLILVHGLVVTELLFLYRDKMEFLDLPLVMIENIFSYFSHDEIAKNRLVCRTFNE 231
           +++ YT+ +      T             DLP  +IE I SY  + +++  RLV    N+
Sbjct: 95  RLHSYTMQMQRQRPPTATTTTTTSAPSLYDLPNELIEKILSYVDYKKVSNLRLVSHRMND 154

Query: 232 ICSRMLNRGFLMIERRHAMALKTVKAQLPRRESERRHHPLSRHCDILTSIETRISMLSMT 411
           IC  MLN  F    +      + +KA +PRRES RR+HPL+  CDI+ +   R+S+L M+
Sbjct: 155 ICMAMLNTAFTKQIKTTLSRFQAIKASMPRRESHRRNHPLACECDIIETCYMRLSLLQMS 214

Query: 412 YSKYIDTGMCCFIPGKVIDEIKRVLTILDTSATPPRAHEVLQELRDISSMAIEHFDDKI 588
             K+I+ G CCF PG ++DE++ +L  +  +    R + V  EL D+S+MA+E+F D+I
Sbjct: 215 MGKHIERGHCCFFPGAILDEVQAILNYISITPRLQRPYRVTDELFDLSTMAMEYFKDRI 273


>BT001595-1|AAN71350.1|  559|Drosophila melanogaster RE28319p
           protein.
          Length = 559

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 142 LPLVMIENIFSYFSHDEIAKNRLVCRTFNEI 234
           LP  ++ +IFSY SH EI +   +CR + +I
Sbjct: 81  LPDKVLLHIFSYLSHREICRLARICRRWRQI 111


>AY069210-1|AAL39355.1|  511|Drosophila melanogaster GH26184p
           protein.
          Length = 511

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 142 LPLVMIENIFSYFSHDEIAKNRLVCRTFNEI 234
           LP  ++ +IFSY SH EI +   +CR + +I
Sbjct: 33  LPDKVLLHIFSYLSHREICRLARICRRWRQI 63


>AE014297-4385|AAF56899.2|  515|Drosophila melanogaster CG2010-PA,
           isoform A protein.
          Length = 515

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 142 LPLVMIENIFSYFSHDEIAKNRLVCRTFNEI 234
           LP  ++ +IFSY SH EI +   +CR + +I
Sbjct: 37  LPDKVLLHIFSYLSHREICRLARICRRWRQI 67


>AE014297-4384|AAN14173.1|  511|Drosophila melanogaster CG2010-PB,
           isoform B protein.
          Length = 511

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 142 LPLVMIENIFSYFSHDEIAKNRLVCRTFNEI 234
           LP  ++ +IFSY SH EI +   +CR + +I
Sbjct: 33  LPDKVLLHIFSYLSHREICRLARICRRWRQI 63


>AY094734-1|AAM11087.1| 2114|Drosophila melanogaster GH26789p
           protein.
          Length = 2114

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +1

Query: 511 PPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQVAPKPG 648
           P  A E+ Q LRD   +A E  D +I  A+ + +  GIA+V  K G
Sbjct: 763 PYLAFELAQALRDDGVIAPEVNDKQIYAAYAQAIDTGIAKVMAKMG 808


>AE014296-2803|AAO41243.1| 2114|Drosophila melanogaster CG9674-PD,
           isoform D protein.
          Length = 2114

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +1

Query: 511 PPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQVAPKPG 648
           P  A E+ Q LRD   +A E  D +I  A+ + +  GIA+V  K G
Sbjct: 763 PYLAFELAQALRDDGVIAPEVNDKQIYAAYAQAIDTGIAKVMAKMG 808


>AE014296-2802|AAF49409.2| 2114|Drosophila melanogaster CG9674-PA,
           isoform A protein.
          Length = 2114

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +1

Query: 511 PPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQVAPKPG 648
           P  A E+ Q LRD   +A E  D +I  A+ + +  GIA+V  K G
Sbjct: 763 PYLAFELAQALRDDGVIAPEVNDKQIYAAYAQAIDTGIAKVMAKMG 808


>BT010305-1|AAQ23623.1| 1124|Drosophila melanogaster GM01353p
           protein.
          Length = 1124

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 139 DLPLVMIENIFSYFSHDEIAKNRLVCRTFNEICS 240
           +LP  ++  IFSY    ++ +  LVC+ FN I +
Sbjct: 312 ELPDEVLLAIFSYLMEQDLCRLALVCKRFNTIAN 345


>AY075203-1|AAL68071.1|  571|Drosophila melanogaster AT14039p
           protein.
          Length = 571

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
 Frame = +1

Query: 319 RRESERRHHPLSRHCDILTSI---ETRISMLSMTYSKYIDTGMCCFIPGKVIDEIKRVLT 489
           RR   +R++ L     ++T     E R  + + TY+ ++DT       G   DE+K    
Sbjct: 65  RRRKRKRYYHLGLVAKLVTETTHDELRRMLENGTYTFHVDT------VGNKPDELK---A 115

Query: 490 ILDTSATPPRAHEVLQELRDISSMAIE 570
           ILDT      AH   +ELR  + +A+E
Sbjct: 116 ILDTMNIAISAHSAERELRLTTGLALE 142


>AE014297-1050|AAF54459.1| 1182|Drosophila melanogaster CG9461-PA
           protein.
          Length = 1182

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 139 DLPLVMIENIFSYFSHDEIAKNRLVCRTFNEICS 240
           +LP  ++  IFSY    ++ +  LVC+ FN I +
Sbjct: 370 ELPDEVLLAIFSYLMEQDLCRLALVCKRFNTIAN 403


>AE014296-2911|AAF49341.1|  571|Drosophila melanogaster CG12229-PA
           protein.
          Length = 571

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
 Frame = +1

Query: 319 RRESERRHHPLSRHCDILTSI---ETRISMLSMTYSKYIDTGMCCFIPGKVIDEIKRVLT 489
           RR   +R++ L     ++T     E R  + + TY+ ++DT       G   DE+K    
Sbjct: 65  RRRKRKRYYHLGLVAKLVTETTHDELRRMLENGTYTFHVDT------VGNKPDELK---A 115

Query: 490 ILDTSATPPRAHEVLQELRDISSMAIE 570
           ILDT      AH   +ELR  + +A+E
Sbjct: 116 ILDTMNIAISAHSAERELRLTTGLALE 142


>X54061-1|CAA37996.1| 1163|Drosophila melanogaster 205 K
           microtubule-associated proteinprotein.
          Length = 1163

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +1

Query: 487 TILDTSATPPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQVAP 639
           ++ + +++P    EV+   + +    +  FD+K +  F KNL+E  +Q+ P
Sbjct: 188 SLSENNSSPLDQEEVVMVAQTVGQEQLVDFDNKENSYFVKNLEENHSQLNP 238


>BT003276-1|AAO25033.1| 1163|Drosophila melanogaster LD12965p
           protein.
          Length = 1163

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +1

Query: 487 TILDTSATPPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQVAP 639
           ++ + +++P    EV+   + +    +  FD+K +  F KNL+E  +Q+ P
Sbjct: 188 SLSENNSSPLDQEEVVMVAQTVGQEQLVDFDNKENSYFVKNLEENHSQLNP 238


>BT001567-1|AAN71322.1|  188|Drosophila melanogaster RE18604p
           protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = -3

Query: 191 SSCEKYENIFSIITKGRSRNSILSRYKNNNSVTTKPCTRINVYS*ILINIYTCSLTVVRF 12
           S+ EK  ++F  IT G S  S LS+ KN+ S+ +   +  + Y  +   + + S +V  F
Sbjct: 109 STGEKTASVFGSITSGIS--SKLSQMKNSESMRSIEASVGSAYENVKTKVTSRSGSVSSF 166

Query: 11  PD 6
           PD
Sbjct: 167 PD 168


>AY061481-1|AAL29029.1|  208|Drosophila melanogaster LD44733p
           protein.
          Length = 208

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = -3

Query: 191 SSCEKYENIFSIITKGRSRNSILSRYKNNNSVTTKPCTRINVYS*ILINIYTCSLTVVRF 12
           S+ EK  ++F  IT G S  S LS+ KN+ S+ +   +  + Y  +   + + S +V  F
Sbjct: 129 STGEKTASVFGSITSGIS--SKLSQMKNSESMRSIEASVGSAYENVKTKVTSRSGSVSSF 186

Query: 11  PD 6
           PD
Sbjct: 187 PD 188


>AE014297-4842|AAN14301.1| 1185|Drosophila melanogaster CG1483-PB,
           isoform B protein.
          Length = 1185

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +1

Query: 487 TILDTSATPPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQVAP 639
           ++ + +++P    EV+   + +    +  FD+K +  F KNL+E  +Q+ P
Sbjct: 188 SLSENNSSPLDQEEVVMVAQTVGQEQLVDFDNKENSYFVKNLEENHSQLNP 238


>AE014297-4841|AAF57214.1| 1163|Drosophila melanogaster CG1483-PA,
           isoform A protein.
          Length = 1163

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +1

Query: 487 TILDTSATPPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQVAP 639
           ++ + +++P    EV+   + +    +  FD+K +  F KNL+E  +Q+ P
Sbjct: 188 SLSENNSSPLDQEEVVMVAQTVGQEQLVDFDNKENSYFVKNLEENHSQLNP 238


>AE013599-2698|AAF57690.1|  355|Drosophila melanogaster CG5174-PB,
           isoform B protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = -3

Query: 191 SSCEKYENIFSIITKGRSRNSILSRYKNNNSVTTKPCTRINVYS*ILINIYTCSLTVVRF 12
           S+ EK  ++F  IT G S  S LS+ KN+ S+ +   +  + Y  +   + + S +V  F
Sbjct: 276 STGEKTASVFGSITSGIS--SKLSQMKNSESMRSIEASVGSAYENVKTKVTSRSGSVSSF 333

Query: 11  PD 6
           PD
Sbjct: 334 PD 335


>AE013599-2696|AAM68456.1|  188|Drosophila melanogaster CG5174-PH,
           isoform H protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = -3

Query: 191 SSCEKYENIFSIITKGRSRNSILSRYKNNNSVTTKPCTRINVYS*ILINIYTCSLTVVRF 12
           S+ EK  ++F  IT G S  S LS+ KN+ S+ +   +  + Y  +   + + S +V  F
Sbjct: 109 STGEKTASVFGSITSGIS--SKLSQMKNSESMRSIEASVGSAYENVKTKVTSRSGSVSSF 166

Query: 11  PD 6
           PD
Sbjct: 167 PD 168


>AE013599-2695|AAM68455.1|  208|Drosophila melanogaster CG5174-PA,
           isoform A protein.
          Length = 208

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = -3

Query: 191 SSCEKYENIFSIITKGRSRNSILSRYKNNNSVTTKPCTRINVYS*ILINIYTCSLTVVRF 12
           S+ EK  ++F  IT G S  S LS+ KN+ S+ +   +  + Y  +   + + S +V  F
Sbjct: 129 STGEKTASVFGSITSGIS--SKLSQMKNSESMRSIEASVGSAYENVKTKVTSRSGSVSSF 186

Query: 11  PD 6
           PD
Sbjct: 187 PD 188


>AE013599-2694|AAM68454.1|  201|Drosophila melanogaster CG5174-PI,
           isoform I protein.
          Length = 201

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = -3

Query: 191 SSCEKYENIFSIITKGRSRNSILSRYKNNNSVTTKPCTRINVYS*ILINIYTCSLTVVRF 12
           S+ EK  ++F  IT G S  S LS+ KN+ S+ +   +  + Y  +   + + S +V  F
Sbjct: 122 STGEKTASVFGSITSGIS--SKLSQMKNSESMRSIEASVGSAYENVKTKVTSRSGSVSSF 179

Query: 11  PD 6
           PD
Sbjct: 180 PD 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,605,473
Number of Sequences: 53049
Number of extensions: 639654
Number of successful extensions: 1750
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -