Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27b06
(708 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF181654-1|AAD55439.1| 652|Drosophila melanogaster BcDNA.LD2383... 415 e-116
AE013599-854|AAF58945.1| 652|Drosophila melanogaster CG8801-PA ... 415 e-116
BT015198-1|AAT94427.1| 382|Drosophila melanogaster RE71283p pro... 44 2e-04
AY075526-1|AAL68333.1| 222|Drosophila melanogaster RE72863p pro... 44 2e-04
AE014134-1478|AAF52655.1| 381|Drosophila melanogaster CG13390-P... 44 2e-04
AY075171-1|AAL68041.1| 363|Drosophila melanogaster AT06125p pro... 36 0.054
AE014297-2691|AAF55688.1| 363|Drosophila melanogaster CG6195-PA... 36 0.054
AY070937-1|AAL48559.1| 383|Drosophila melanogaster RE03627p pro... 33 0.29
AE014134-3156|AAG22443.2| 383|Drosophila melanogaster CG10628-P... 33 0.29
AY095074-1|AAM11402.1| 397|Drosophila melanogaster RE21802p pro... 32 0.88
AE014298-1368|AAN09614.1| 397|Drosophila melanogaster CG1354-PD... 32 0.88
AE014298-1367|AAN09613.1| 397|Drosophila melanogaster CG1354-PC... 32 0.88
AE014298-1366|AAF46520.2| 397|Drosophila melanogaster CG1354-PA... 32 0.88
X71866-1|CAA50701.1| 368|Drosophila melanogaster GTP-binding pr... 31 1.2
AY069810-1|AAL39955.1| 368|Drosophila melanogaster SD05004p pro... 31 1.2
AE013599-1386|AAF58591.1| 368|Drosophila melanogaster CG8340-PA... 31 1.2
AY118455-1|AAM49824.1| 581|Drosophila melanogaster AT23067p pro... 31 2.0
AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p pro... 31 2.0
AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p pro... 31 2.0
AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-P... 31 2.0
AE014297-2303|AAN13730.1| 581|Drosophila melanogaster CG3983-PB... 31 2.0
AE014297-2302|AAF55384.3| 581|Drosophila melanogaster CG3983-PA... 31 2.0
AY089700-1|AAL90438.1| 674|Drosophila melanogaster SD10213p pro... 30 3.5
AY051656-1|AAK93080.1| 1098|Drosophila melanogaster LD11008p pro... 30 3.5
AF315579-1|AAL26879.1| 674|Drosophila melanogaster nuclear GTP ... 30 3.5
AF275903-1|AAG60004.1| 1332|Drosophila melanogaster echinoid pro... 30 3.5
AE014134-697|AAF51045.2| 1332|Drosophila melanogaster CG12676-PA... 30 3.5
AE013599-2507|AAF57834.1| 674|Drosophila melanogaster CG6501-PA... 30 3.5
AY118506-1|AAM49875.1| 575|Drosophila melanogaster LD10773p pro... 29 6.2
AY113215-1|AAM29220.1| 268|Drosophila melanogaster AT07410p pro... 29 6.2
AE014297-1607|AAF54886.2| 373|Drosophila melanogaster CG7488-PA... 29 6.2
AE014134-3278|AAF53920.1| 575|Drosophila melanogaster CG9320-PA... 29 6.2
BT022918-1|AAY55334.1| 254|Drosophila melanogaster IP08372p pro... 29 8.2
AE013599-513|AAM68867.2| 254|Drosophila melanogaster CG30383-PA... 29 8.2
>AF181654-1|AAD55439.1| 652|Drosophila melanogaster BcDNA.LD23830
protein.
Length = 652
Score = 415 bits (1022), Expect = e-116
Identities = 194/210 (92%), Positives = 203/210 (96%)
Frame = +3
Query: 78 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 257
MSLYNFKKI VVP AKDFIDI+LSKTQRKTPTVVHK YKISRIR FY RKVKYTQQNFHD
Sbjct: 1 MSLYNFKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRKVKYTQQNFHD 60
Query: 258 RLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYG 437
RLS+IIQ+FPKLDDVHPFYADLMNVLYDKDHYKL LGQLNTARHL+DNVAKDYVRLLKYG
Sbjct: 61 RLSQIIQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLNTARHLVDNVAKDYVRLLKYG 120
Query: 438 DSLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVG 617
DSLYRCKQLK+AALGRMATIMKRQ +NLTYLEQVRQHL+RLP+IDPY+RTIIICGFPNVG
Sbjct: 121 DSLYRCKQLKKAALGRMATIMKRQASNLTYLEQVRQHLSRLPTIDPYSRTIIICGFPNVG 180
Query: 618 KSSFINKITRADVEVQPYAFTTKSLYVGHT 707
KSSFINKITRADVEVQPYAFTTKSLYVGHT
Sbjct: 181 KSSFINKITRADVEVQPYAFTTKSLYVGHT 210
>AE013599-854|AAF58945.1| 652|Drosophila melanogaster CG8801-PA
protein.
Length = 652
Score = 415 bits (1022), Expect = e-116
Identities = 194/210 (92%), Positives = 203/210 (96%)
Frame = +3
Query: 78 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 257
MSLYNFKKI VVP AKDFIDI+LSKTQRKTPTVVHK YKISRIR FY RKVKYTQQNFHD
Sbjct: 1 MSLYNFKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRKVKYTQQNFHD 60
Query: 258 RLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYG 437
RLS+IIQ+FPKLDDVHPFYADLMNVLYDKDHYKL LGQLNTARHL+DNVAKDYVRLLKYG
Sbjct: 61 RLSQIIQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLNTARHLVDNVAKDYVRLLKYG 120
Query: 438 DSLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVG 617
DSLYRCKQLK+AALGRMATIMKRQ +NLTYLEQVRQHL+RLP+IDPY+RTIIICGFPNVG
Sbjct: 121 DSLYRCKQLKKAALGRMATIMKRQASNLTYLEQVRQHLSRLPTIDPYSRTIIICGFPNVG 180
Query: 618 KSSFINKITRADVEVQPYAFTTKSLYVGHT 707
KSSFINKITRADVEVQPYAFTTKSLYVGHT
Sbjct: 181 KSSFINKITRADVEVQPYAFTTKSLYVGHT 210
>BT015198-1|AAT94427.1| 382|Drosophila melanogaster RE71283p
protein.
Length = 382
Score = 44.4 bits (100), Expect = 2e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 701
+ G+PN GKS+ +N +TRA +V PYAFTT ++G
Sbjct: 211 LIGYPNAGKSTLLNALTRAKPKVAPYAFTTLRPHLG 246
>AY075526-1|AAL68333.1| 222|Drosophila melanogaster RE72863p
protein.
Length = 222
Score = 44.4 bits (100), Expect = 2e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 701
+ G+PN GKS+ +N +TRA +V PYAFTT ++G
Sbjct: 51 LIGYPNAGKSTLLNALTRAKPKVAPYAFTTLRPHLG 86
>AE014134-1478|AAF52655.1| 381|Drosophila melanogaster CG13390-PA
protein.
Length = 381
Score = 44.4 bits (100), Expect = 2e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 701
+ G+PN GKS+ +N +TRA +V PYAFTT ++G
Sbjct: 210 LIGYPNAGKSTLLNALTRAKPKVAPYAFTTLRPHLG 245
>AY075171-1|AAL68041.1| 363|Drosophila melanogaster AT06125p
protein.
Length = 363
Score = 35.9 bits (79), Expect = 0.054
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 588 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 701
+ + GFP+VGKS+ ++ +T+ + E Y FTT + G
Sbjct: 64 VALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPG 101
>AE014297-2691|AAF55688.1| 363|Drosophila melanogaster CG6195-PA
protein.
Length = 363
Score = 35.9 bits (79), Expect = 0.054
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 588 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 701
+ + GFP+VGKS+ ++ +T+ + E Y FTT + G
Sbjct: 64 VALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPG 101
>AY070937-1|AAL48559.1| 383|Drosophila melanogaster RE03627p
protein.
Length = 383
Score = 33.5 bits (73), Expect = 0.29
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 701
+ GFPN GKS+ + ++ A ++ Y FTT +G
Sbjct: 162 LVGFPNAGKSTLLKAVSNAKPKIAAYPFTTIRPQIG 197
>AE014134-3156|AAG22443.2| 383|Drosophila melanogaster CG10628-PA
protein.
Length = 383
Score = 33.5 bits (73), Expect = 0.29
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 701
+ GFPN GKS+ + ++ A ++ Y FTT +G
Sbjct: 162 LVGFPNAGKSTLLKAVSNAKPKIAAYPFTTIRPQIG 197
>AY095074-1|AAM11402.1| 397|Drosophila melanogaster RE21802p
protein.
Length = 397
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTT 683
I G PNVGKS+F N +T++ + + F T
Sbjct: 26 IVGVPNVGKSTFFNVLTQSAAPAENFPFCT 55
>AE014298-1368|AAN09614.1| 397|Drosophila melanogaster CG1354-PD,
isoform D protein.
Length = 397
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTT 683
I G PNVGKS+F N +T++ + + F T
Sbjct: 26 IVGVPNVGKSTFFNVLTQSAAPAENFPFCT 55
>AE014298-1367|AAN09613.1| 397|Drosophila melanogaster CG1354-PC,
isoform C protein.
Length = 397
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTT 683
I G PNVGKS+F N +T++ + + F T
Sbjct: 26 IVGVPNVGKSTFFNVLTQSAAPAENFPFCT 55
>AE014298-1366|AAF46520.2| 397|Drosophila melanogaster CG1354-PA,
isoform A protein.
Length = 397
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTT 683
I G PNVGKS+F N +T++ + + F T
Sbjct: 26 IVGVPNVGKSTFFNVLTQSAAPAENFPFCT 55
>X71866-1|CAA50701.1| 368|Drosophila melanogaster GTP-binding
protein protein.
Length = 368
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 701
GFP+VGKS+ ++ + EV Y FTT + G
Sbjct: 71 GFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPG 104
>AY069810-1|AAL39955.1| 368|Drosophila melanogaster SD05004p
protein.
Length = 368
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 701
GFP+VGKS+ ++ + EV Y FTT + G
Sbjct: 71 GFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPG 104
>AE013599-1386|AAF58591.1| 368|Drosophila melanogaster CG8340-PA
protein.
Length = 368
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 701
GFP+VGKS+ ++ + EV Y FTT + G
Sbjct: 71 GFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPG 104
>AY118455-1|AAM49824.1| 581|Drosophila melanogaster AT23067p
protein.
Length = 581
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITR 647
+ G PNVGKSS IN +TR
Sbjct: 272 VVGIPNVGKSSIINSLTR 289
>AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p
protein.
Length = 493
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 582 RTIIICGFPNVGKSSFINKITRADVE-VQPYAFTTKSL 692
RT+II G PNVGKSS +N + + V V A TT+ +
Sbjct: 241 RTVII-GAPNVGKSSLLNLLCQRSVSIVTDQAGTTRDI 277
>AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p
protein.
Length = 493
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 582 RTIIICGFPNVGKSSFINKITRADVE-VQPYAFTTKSL 692
RT+II G PNVGKSS +N + + V V A TT+ +
Sbjct: 241 RTVII-GAPNVGKSSLLNLLCQRSVSIVTDQAGTTRDI 277
>AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-PA
protein.
Length = 493
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 582 RTIIICGFPNVGKSSFINKITRADVE-VQPYAFTTKSL 692
RT+II G PNVGKSS +N + + V V A TT+ +
Sbjct: 241 RTVII-GAPNVGKSSLLNLLCQRSVSIVTDQAGTTRDI 277
>AE014297-2303|AAN13730.1| 581|Drosophila melanogaster CG3983-PB,
isoform B protein.
Length = 581
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITR 647
+ G PNVGKSS IN +TR
Sbjct: 272 VVGIPNVGKSSIINSLTR 289
>AE014297-2302|AAF55384.3| 581|Drosophila melanogaster CG3983-PA,
isoform A protein.
Length = 581
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITR 647
+ G PNVGKSS IN +TR
Sbjct: 272 VVGIPNVGKSSIINSLTR 289
>AY089700-1|AAL90438.1| 674|Drosophila melanogaster SD10213p
protein.
Length = 674
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADV-EVQPYAFTTK 686
G+PNVGKSS IN + V +V P A TK
Sbjct: 322 GYPNVGKSSVINALRSKKVCKVAPIAGETK 351
>AY051656-1|AAK93080.1| 1098|Drosophila melanogaster LD11008p
protein.
Length = 1098
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 447 YRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFP 608
Y C + +G MATI+ +L +++QH+ R + YT T G P
Sbjct: 268 YHCHAVNELGIGMMATIVLEIHQPPQFLAKLQQHMTRRVADTDYTVTCSAKGKP 321
>AF315579-1|AAL26879.1| 674|Drosophila melanogaster nuclear GTP
binding protein protein.
Length = 674
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADV-EVQPYAFTTK 686
G+PNVGKSS IN + V +V P A TK
Sbjct: 322 GYPNVGKSSVINALRSKKVCKVAPIAGETK 351
>AF275903-1|AAG60004.1| 1332|Drosophila melanogaster echinoid
protein.
Length = 1332
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 447 YRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFP 608
Y C + +G MATI+ +L +++QH+ R + YT T G P
Sbjct: 502 YHCHAVNELGIGMMATIVLEIHQPPQFLAKLQQHMTRRVADTDYTVTCSAKGKP 555
>AE014134-697|AAF51045.2| 1332|Drosophila melanogaster CG12676-PA
protein.
Length = 1332
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 447 YRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFP 608
Y C + +G MATI+ +L +++QH+ R + YT T G P
Sbjct: 502 YHCHAVNELGIGMMATIVLEIHQPPQFLAKLQQHMTRRVADTDYTVTCSAKGKP 555
>AE013599-2507|AAF57834.1| 674|Drosophila melanogaster CG6501-PA
protein.
Length = 674
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADV-EVQPYAFTTK 686
G+PNVGKSS IN + V +V P A TK
Sbjct: 322 GYPNVGKSSVINALRSKKVCKVAPIAGETK 351
>AY118506-1|AAM49875.1| 575|Drosophila melanogaster LD10773p
protein.
Length = 575
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 585 TIIICGFPNVGKSSFINKI 641
TI GFPNVGKSS IN +
Sbjct: 334 TIGCIGFPNVGKSSLINAL 352
>AY113215-1|AAM29220.1| 268|Drosophila melanogaster AT07410p
protein.
Length = 268
Score = 29.1 bits (62), Expect = 6.2
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = -2
Query: 323 EISIKWMDII*LWEFLNNSGQSVVEVLLGIFHFSNIKPTYS*YF-IMLVNDC 171
+I+ K+ D++ + + N+ +S+V LG+F ++K TYS Y +L N+C
Sbjct: 23 DINSKYYDMVIEFMWSNSFLKSLVYESLGLFDLPDMKQTYSWYVRHILRNEC 74
>AE014297-1607|AAF54886.2| 373|Drosophila melanogaster CG7488-PA
protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 552 ARLPSIDPYTRTIIICGFPNVGKSSFIN 635
+R P + + I + G PNVGKS+FIN
Sbjct: 50 SRNPGEEQRSLHIAVIGVPNVGKSTFIN 77
>AE014134-3278|AAF53920.1| 575|Drosophila melanogaster CG9320-PA
protein.
Length = 575
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 585 TIIICGFPNVGKSSFINKI 641
TI GFPNVGKSS IN +
Sbjct: 334 TIGCIGFPNVGKSSLINAL 352
>BT022918-1|AAY55334.1| 254|Drosophila melanogaster IP08372p
protein.
Length = 254
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 258 RLSRIIQEFPKLDDVHPFYADL-MNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKY 434
+LS + Q+ KL D+HPF+ + Y D + +H I + ++ +K
Sbjct: 89 QLSEMAQKRLKLLDLHPFFRRVAQGYQYTPDCDLAARFVVQRQKHFIQ---PEDIKKIKK 145
Query: 435 GDSLYRCK 458
GDSL RC+
Sbjct: 146 GDSLKRCQ 153
>AE013599-513|AAM68867.2| 254|Drosophila melanogaster CG30383-PA
protein.
Length = 254
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 258 RLSRIIQEFPKLDDVHPFYADL-MNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKY 434
+LS + Q+ KL D+HPF+ + Y D + +H I + ++ +K
Sbjct: 89 QLSEMAQKRLKLLDLHPFFRRVAQGYQYTPDCDLAARFVVQRQKHFIQ---PEDIKKIKK 145
Query: 435 GDSLYRCK 458
GDSL RC+
Sbjct: 146 GDSLKRCQ 153
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,578,367
Number of Sequences: 53049
Number of extensions: 709418
Number of successful extensions: 1751
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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