Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27a23
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1136 + 9012069-9012317,9013547-9013722,9014342-9014425,901... 127 1e-29
04_01_0034 - 401208-402923 33 0.30
05_01_0301 - 2356880-2357959 31 1.2
04_04_1097 - 30859963-30860302,30862130-30863058 30 1.6
10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540... 29 2.8
03_05_0167 - 21448714-21448846,21449748-21449870,21450024-214503... 29 3.6
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 29 3.6
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 29 4.8
09_03_0086 + 12230402-12231526 29 4.8
09_02_0236 - 6131072-6131639,6132047-6132180 29 4.8
05_03_0458 + 14280953-14281866,14281964-14282912 29 4.8
03_03_0184 + 15228045-15228405,15228725-15228883,15228984-152292... 29 4.8
01_05_0421 + 21990034-21990392,21991691-21992681 29 4.8
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 29 4.8
12_01_0419 - 3316866-3318172,3318249-3318360 28 6.4
06_03_1273 + 28892774-28893946,28894964-28895104,28895277-288953... 28 6.4
06_03_0343 + 19750914-19751047,19752091-19752676 28 6.4
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 28 6.4
09_04_0442 - 17630039-17630782 28 8.4
03_01_0618 + 4543013-4543111,4544100-4544177,4544739-4544873,454... 28 8.4
01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728 28 8.4
>01_01_1136 +
9012069-9012317,9013547-9013722,9014342-9014425,
9014757-9014826,9015644-9015652
Length = 195
Score = 127 bits (306), Expect = 1e-29
Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 2/158 (1%)
Frame = +2
Query: 134 VDALPYIDQGYDDPGVREAALAMVEEECRR-YRPTKNYLENAGPEPSSAFET-PALQREM 307
VDALPYID Y DP V+ MVEEE RR R ++L + P P+ FE P L +E
Sbjct: 33 VDALPYIDGDYGDPAVKREVDRMVEEEMRRGSRKPADFLRDLPPVPAIGFENHPMLAKEY 92
Query: 308 ERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQLSHQAIRVLNLELQLEY 487
ERV+ P + M RY L PPP + ++ +AW +++ N+ +QL HQ IR+ NLEL L+Y
Sbjct: 93 ERVRAGKPPATIEMSRYGLEPPPANKRNDVAAWRQALRNAQSQLHHQIIRIENLELMLKY 152
Query: 488 GSEAWRSYLNTLQALVTRAQNEHNQLRKQIGSVNWERK 601
G E W+ ++++++R Q + ++I +VN ERK
Sbjct: 153 GVEVWKLQNRQMESVLSRMQKMAVEYNEKIETVNRERK 190
>04_01_0034 - 401208-402923
Length = 571
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 248 ENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPS 400
ENA P A P ++ + Q P PL + PPPP + ++PS
Sbjct: 270 ENAPPAAKQAAAAPPMRAPLAEQQPHAPRLPLQPRPAPPPPPPQQQRAKPS 320
>05_01_0301 - 2356880-2357959
Length = 359
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 222 RLHSSSTMANAASLTPGSSYPWSIYGNASTTTS 124
R S+ M +++S +PG+S+ W +Y +S+ +S
Sbjct: 144 RFRRSAVMPSSSSSSPGASHRWHVYSASSSASS 176
>04_04_1097 - 30859963-30860302,30862130-30863058
Length = 422
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 426 ELSTDSAQALGSLILPTGGGGSSYLFIDNGSIGN 325
E S S +L SL T GGGS + +DN S+G+
Sbjct: 39 ESSNMSIDSLNSLQTSTHGGGSVAMSVDNSSVGS 72
>10_08_0583 -
18952168-18952263,18953663-18953740,18954006-18954081,
18954687-18954735,18955271-18955469,18955761-18955799,
18955800-18956123
Length = 286
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 251 NAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPP 370
+A ++AF +QRE + V+++ P +M+ LPP
Sbjct: 8 SASSAAAAAFRPAVVQREQQVVEEKFPAAAAAMREMVLPP 47
>03_05_0167 -
21448714-21448846,21449748-21449870,21450024-21450302,
21450389-21450672,21450737-21450964,21452937-21453110,
21453198-21453732,21453779-21453840,21453908-21454231,
21454664-21455093,21457033-21457268,21457355-21457414,
21457495-21457628,21457884-21458010,21458239-21458337,
21458414-21458513,21458601-21458671,21459101-21459172,
21459656-21459787,21460512-21460670
Length = 1253
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = -2
Query: 615 AVCTRLRSQFTEPICLRNWLCSF*ALVTNA*SVLRYDLHASEPYSNCNSKLRTLIAWCDS 436
+VC+ +S F+E + +W+ + L + +LR D + YS+ L ++ + D
Sbjct: 366 SVCSAQQSNFSEEVSFSDWMRARPELYSILRRLLRRDPMGALGYSSSKPSLAKIVEYADG 425
Query: 435 CA*ELSTDSAQALGSLI 385
E+ +A G ++
Sbjct: 426 RPHEMDIVAAMRNGEVL 442
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 404 WAESVDNSHAQLSHQAIRVLNLELQLEYGSEAWRSYLNTLQALVTRAQNEHNQLR 568
W ES+ N QLS Q +++ N Q E S T+ A + E N L+
Sbjct: 410 WEESLQNDEKQLSEQKLQIENERKQAEMYKLELESLKATVVAEKEKILQEQNNLK 464
>09_04_0076 + 14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 173 PGVREAALAMVEEECRRYRPT--KNYLENAG-PEPSSAFETPALQREMERVQQRLPMEPL 343
PG+ + +A RP +N + N G P+ + P Q + + Q +PM+P+
Sbjct: 1195 PGIILSRIAQPAPGMSAVRPVHNQNMMANVGLPDGGVPPQAPMQQAQFPQ-QPGMPMDPI 1253
Query: 344 SMKRYELPPPPVGRMSEPSA 403
S+ +PP S+P A
Sbjct: 1254 SLPDGGVPPQSQPLPSQPQA 1273
>09_03_0086 + 12230402-12231526
Length = 374
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Frame = +2
Query: 329 PMEPLSMKRYELPPPPVGRM--SEPSAWAESVDNSHAQLSHQAIRVLN-----LELQLEY 487
P + L+ +R E PPPPVG E SA A + + A+ + + L+L ++
Sbjct: 294 PAKGLARRRTEEPPPPVGEAVHDEGSAAAAAAGDDGAEEERDELVFMRTAPDFLKLSIDI 353
Query: 488 GSEAW 502
E W
Sbjct: 354 AKETW 358
>09_02_0236 - 6131072-6131639,6132047-6132180
Length = 233
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 203 VEEECRRYRPTKNYL---ENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPP 373
V+EE + +NY+ + P+P+SA T AL R + + ++P LPPP
Sbjct: 91 VQEELQYASQLQNYITKFHSPAPDPTSAVATTALSR-----RHAIHLQPPP----PLPPP 141
Query: 374 PVGRMSEPSA 403
P G + SA
Sbjct: 142 PEGAFAAGSA 151
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 266 PSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSA 403
PSS+ +P ++ LP LS + PPPP + PSA
Sbjct: 58 PSSSPSSPPPLPPLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSPSA 103
>03_03_0184 +
15228045-15228405,15228725-15228883,15228984-15229258,
15229346-15229594,15229670-15229788,15229874-15229972,
15230068-15230176,15230281-15230421
Length = 503
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 149 YIDQGYDDPGVREAALAMVEE-ECRRYRPTKNYLENAGPEPSS 274
Y + DDP + L + C YR TK YLE +GP SS
Sbjct: 101 YFAEATDDPSTKPLVLWLNGGLTCEFYRMTKLYLEISGPGCSS 143
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -2
Query: 375 GGGGSSYLFIDNGSIGNLCCTLSISRCKAGVSNAELGSGPAFSR*FFVGL 226
GGGG I G +G+L T S R V+ A G G +R F+GL
Sbjct: 335 GGGGGGNGLIPAGMMGHLARTASHGRSGEDVAGAGGGGGDGMTR-DFLGL 383
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +2
Query: 125 EVVVDALPYIDQGYDDPGVREAALAMVEEECRRYRPTKNYLENAGPEPSSAFETPALQRE 304
+V+ + L +D G + G+R+ + + ++CR Y+ L NA + + AL +
Sbjct: 191 DVLAEMLNALDPGNRE-GLRQEVIVELVDQCRTYKQRVVLLVNATADEELMSQGLALNDD 249
Query: 305 MERV 316
++RV
Sbjct: 250 LQRV 253
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 167 DDPGVREAALAMVEEECRRYRPTKNYLENAGPEPSS--AFETPALQREMERVQQRLPME- 337
DD E L+ +E E + + PEP A ETP E V++ + +E
Sbjct: 177 DDDDDDEDELSSLELEYEDWINVDSSESEPEPEPPRDVAVETPVAVEEEVAVEEEVAVET 236
Query: 338 PLSMKRYELPPPP 376
P++++ PPPP
Sbjct: 237 PVAVEEPPPPPPP 249
>06_03_1273 +
28892774-28893946,28894964-28895104,28895277-28895329,
28895852-28895966
Length = 493
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 673 IVRDKLRPPSPQCPQPRTACCLYAFTFPVHRAY 575
++RD PP+P+CP P +C A V R +
Sbjct: 127 LLRDTPPPPTPRCPAPIKSCSSPAPVSSVFREF 159
>06_03_0343 + 19750914-19751047,19752091-19752676
Length = 239
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +2
Query: 227 RPTKNYLENAGPEPSSAFETPALQREMER--VQQRLPMEPLSMKRYELPPPPVGRMSEPS 400
R + ++G + S+ +L+ E + R M + Y+ PPPP + P
Sbjct: 34 RKLRGQAASSGTQNSNGLSNSSLELPSEHHFLAARTGMNGFAPTGYQQPPPPPAASASPG 93
Query: 401 AWAES 415
W S
Sbjct: 94 GWIAS 98
>01_06_0756 -
31731607-31731752,31732368-31732467,31732716-31732943,
31733390-31733474,31733583-31733662,31733755-31733826,
31733964-31734058,31735442-31735523,31735646-31735927
Length = 389
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/99 (22%), Positives = 44/99 (44%)
Frame = +2
Query: 314 VQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQLSHQAIRVLNLELQLEYGS 493
V + LP + SM+ VG++++ + + A + + I + N + L GS
Sbjct: 182 VVENLPSD-FSMESIHAKFETVGKIAKITIHDQHSVGESATIKNHDIMLSNKAITLNDGS 240
Query: 494 EAWRSYLNTLQALVTRAQNEHNQLRKQIGSVNWERKRVQ 610
WR+ + A T +HNQ K+ ++ + +V+
Sbjct: 241 N-WRTGMKVRLAKRTVGSGKHNQSSKENQAIQGQPSKVE 278
>09_04_0442 - 17630039-17630782
Length = 247
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 317 QQRLPMEPLSMKRYELPPPPVGRMSEPSAWAE 412
++RLP+ P + P PPVG+ + + W E
Sbjct: 200 RRRLPIHPPPRLKPPPPHPPVGKRATGAGWVE 231
>03_01_0618 +
4543013-4543111,4544100-4544177,4544739-4544873,
4544971-4545078,4545397-4545525,4546191-4546306,
4546392-4546509,4547274-4547379,4547492-4547631,
4547735-4547905,4547984-4548094,4548206-4548317,
4548615-4548943,4549064-4549154,4549542-4549637,
4549710-4549780,4549868-4549980,4550353-4550434
Length = 734
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 311 RVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQLSHQAIRVLNLELQLEYG 490
R+ R + PLS + + PPP +M P A++ S+ L+H A E+ L Y
Sbjct: 227 RLYDRRMLPPLSTCQTKKEPPPCIKMFCPMHLADT-RKSNLHLTHVAFSPNGKEVLLSYS 285
Query: 491 SE 496
E
Sbjct: 286 GE 287
>01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728
Length = 316
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 245 LENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSE 394
LE PEP E Q E ++ +Q+ +EP ++ P P V E
Sbjct: 201 LEVPEPEPEQESEPVVKQEEEQKEEQKAVVEPAAVTTTVAPAPAVEEEDE 250
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,604,606
Number of Sequences: 37544
Number of extensions: 436104
Number of successful extensions: 1657
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1655
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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