Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27a23
(712 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118331-1|AAM48360.1| 278|Drosophila melanogaster LD24242p pro... 252 4e-67
AE014297-4195|AAF56760.1| 278|Drosophila melanogaster CG4980-PA... 252 4e-67
BT011350-1|AAR96142.1| 489|Drosophila melanogaster RH05790p pro... 31 2.0
AY119154-1|AAM51014.1| 380|Drosophila melanogaster RE65163p pro... 31 2.0
AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptio... 31 2.0
AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj prot... 31 2.0
AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240... 31 2.0
AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 prot... 31 2.0
AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD... 31 2.0
AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC... 31 2.0
AE014134-2891|AAN11175.1| 475|Drosophila melanogaster CG5674-PC... 31 2.0
AE014134-2886|AAN11174.1| 489|Drosophila melanogaster CG5674-PA... 31 2.0
BT001369-1|AAN71124.1| 347|Drosophila melanogaster AT30804p pro... 30 2.7
AE014296-1651|AAF50277.2| 349|Drosophila melanogaster CG3982-PA... 30 2.7
D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein. 29 4.7
AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p pro... 29 4.7
AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,... 29 4.7
AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,... 29 4.7
AE014296-331|AAF47547.2| 685|Drosophila melanogaster CG13930-PA... 29 4.7
BT015989-1|AAV36874.1| 1033|Drosophila melanogaster RE54250p pro... 29 8.2
BT009956-1|AAQ22425.1| 1035|Drosophila melanogaster RH39293p pro... 29 8.2
BT001259-1|AAN71015.1| 1500|Drosophila melanogaster AT02321p pro... 29 8.2
AY119507-1|AAM50161.1| 1015|Drosophila melanogaster GH12467p pro... 29 8.2
AF233269-1|AAF34810.1| 2121|Drosophila melanogaster myosin VIIB ... 29 8.2
AE014134-1309|AAN10638.1| 998|Drosophila melanogaster CG6976-PD... 29 8.2
AE014134-1308|AAF52536.2| 2121|Drosophila melanogaster CG6976-PA... 29 8.2
AE014134-1307|AAN10637.1| 999|Drosophila melanogaster CG6976-PC... 29 8.2
AE014134-1306|AAN10636.1| 2122|Drosophila melanogaster CG6976-PB... 29 8.2
AE013599-1697|AAF58379.1| 1503|Drosophila melanogaster CG4744-PA... 29 8.2
>AY118331-1|AAM48360.1| 278|Drosophila melanogaster LD24242p
protein.
Length = 278
Score = 252 bits (617), Expect = 4e-67
Identities = 117/187 (62%), Positives = 139/187 (74%)
Frame = +2
Query: 116 MAGEVVVDALPYIDQGYDDPGVREAALAMVEEECRRYRPTKNYLENAGPEPSSAFETPAL 295
MAGEV+VDALPYID GYDD GVRE+ALAMVEEECRRYRPTKNYL++ SS FETP +
Sbjct: 1 MAGEVIVDALPYIDHGYDDVGVRESALAMVEEECRRYRPTKNYLDHLPLPASSPFETPLM 60
Query: 296 QREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQLSHQAIRVLNLEL 475
E ER+Q RLPME LSMKRYELPPPP G++SE SAW E+++NS AQL HQ +R LNLEL
Sbjct: 61 ANEFERIQNRLPMETLSMKRYELPPPPSGKLSEVSAWQEAIENSMAQLEHQWVRSLNLEL 120
Query: 476 QLEYGSEAWRSYLNTLQALVTRAQNEHNQLRKQIGSVNWERKRVQTASGXXXXXXXXXWA 655
L+YG+EAW+SYL A+ +AQ + QL+K I VNW+RK+ QT +G W
Sbjct: 121 MLDYGTEAWKSYLEVFTAMQAKAQLQLQQLKKDIQDVNWQRKQAQTQAGERLRSLEAHWV 180
Query: 656 QLVSDNY 676
LVS NY
Sbjct: 181 LLVSKNY 187
>AE014297-4195|AAF56760.1| 278|Drosophila melanogaster CG4980-PA
protein.
Length = 278
Score = 252 bits (617), Expect = 4e-67
Identities = 117/187 (62%), Positives = 139/187 (74%)
Frame = +2
Query: 116 MAGEVVVDALPYIDQGYDDPGVREAALAMVEEECRRYRPTKNYLENAGPEPSSAFETPAL 295
MAGEV+VDALPYID GYDD GVRE+ALAMVEEECRRYRPTKNYL++ SS FETP +
Sbjct: 1 MAGEVIVDALPYIDHGYDDVGVRESALAMVEEECRRYRPTKNYLDHLPLPASSPFETPLM 60
Query: 296 QREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQLSHQAIRVLNLEL 475
E ER+Q RLPME LSMKRYELPPPP G++SE SAW E+++NS AQL HQ +R LNLEL
Sbjct: 61 ANEFERIQNRLPMETLSMKRYELPPPPSGKLSEVSAWQEAIENSMAQLEHQWVRSLNLEL 120
Query: 476 QLEYGSEAWRSYLNTLQALVTRAQNEHNQLRKQIGSVNWERKRVQTASGXXXXXXXXXWA 655
L+YG+EAW+SYL A+ +AQ + QL+K I VNW+RK+ QT +G W
Sbjct: 121 MLDYGTEAWKSYLEVFTAMQAKAQLQLQQLKKDIQDVNWQRKQAQTQAGERLRSLEAHWV 180
Query: 656 QLVSDNY 676
LVS NY
Sbjct: 181 LLVSKNY 187
>BT011350-1|AAR96142.1| 489|Drosophila melanogaster RH05790p
protein.
Length = 489
Score = 30.7 bits (66), Expect = 2.0
Identities = 25/91 (27%), Positives = 41/91 (45%)
Frame = +2
Query: 260 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQL 439
P P TP LQ++ ++ Q+ P ++++ PPP + E SH QL
Sbjct: 214 PPPGQQQPTPQLQQQQQQQLQQHQQVPQQQQQHQQPPPT--HLQEQQL-------SH-QL 263
Query: 440 SHQAIRVLNLELQLEYGSEAWRSYLNTLQAL 532
+HQ R+++ +L A S+L L L
Sbjct: 264 AHQRNRMMSSQLTQLATPPAHASHLQQLNKL 294
>AY119154-1|AAM51014.1| 380|Drosophila melanogaster RE65163p
protein.
Length = 380
Score = 30.7 bits (66), Expect = 2.0
Identities = 25/91 (27%), Positives = 41/91 (45%)
Frame = +2
Query: 260 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQL 439
P P TP LQ++ ++ Q+ P ++++ PPP + E SH QL
Sbjct: 105 PPPGQQQPTPQLQQQQQQQLQQHQQVPQQQQQHQQPPPT--HLQEQQL-------SH-QL 154
Query: 440 SHQAIRVLNLELQLEYGSEAWRSYLNTLQAL 532
+HQ R+++ +L A S+L L L
Sbjct: 155 AHQRNRMMSSQLTQLATPPAHASHLQQLNKL 185
>AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptional
coactivator blindspot protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 260 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSH 430
P P+SA P E++ P P S+ + PP P+ + + + A + + H
Sbjct: 609 PHPNSAHSQPTSVPPAEQLLNMSPHAPTSVSNLQQPPTPIDHLLDKNTPAPTPTDQH 665
>AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj
protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 260 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSH 430
P P+SA P E++ P P S+ + PP P+ + + + A + + H
Sbjct: 609 PHPNSAHSQPTSVPPAEQLLNMSPHAPTSVSNLQQPPTPIDHLLDKNTPAPTPTDQH 665
>AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240
protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 260 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSH 430
P P+SA P E++ P P S+ + PP P+ + + + A + + H
Sbjct: 609 PHPNSAHSQPTSVPPAEQLLNMSPHAPTSVSNLQQPPTPIDHLLDKNTPAPTPTDQH 665
>AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240
protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 260 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSH 430
P P+SA P E++ P P S+ + PP P+ + + + A + + H
Sbjct: 609 PHPNSAHSQPTSVPPAEQLLNMSPHAPTSVSNLQQPPTPIDHLLDKNTPAPTPTDQH 665
>AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD,
isoform D protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 260 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSH 430
P P+SA P E++ P P S+ + PP P+ + + + A + + H
Sbjct: 609 PHPNSAHSQPTSVPPAEQLLNMSPHAPTSVSNLQQPPTPIDHLLDKNTPAPTPTDQH 665
>AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC,
isoform C protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 260 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSH 430
P P+SA P E++ P P S+ + PP P+ + + + A + + H
Sbjct: 609 PHPNSAHSQPTSVPPAEQLLNMSPHAPTSVSNLQQPPTPIDHLLDKNTPAPTPTDQH 665
>AE014134-2891|AAN11175.1| 475|Drosophila melanogaster CG5674-PC,
isoform C protein.
Length = 475
Score = 30.7 bits (66), Expect = 2.0
Identities = 25/91 (27%), Positives = 41/91 (45%)
Frame = +2
Query: 260 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQL 439
P P TP LQ++ ++ Q+ P ++++ PPP + E SH QL
Sbjct: 200 PPPGQQQPTPQLQQQQQQQLQQHQQVPQQQQQHQQPPPT--HLQEQQL-------SH-QL 249
Query: 440 SHQAIRVLNLELQLEYGSEAWRSYLNTLQAL 532
+HQ R+++ +L A S+L L L
Sbjct: 250 AHQRNRMMSSQLTQLATPPAHASHLQQLNKL 280
>AE014134-2886|AAN11174.1| 489|Drosophila melanogaster CG5674-PA,
isoform A protein.
Length = 489
Score = 30.7 bits (66), Expect = 2.0
Identities = 25/91 (27%), Positives = 41/91 (45%)
Frame = +2
Query: 260 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQL 439
P P TP LQ++ ++ Q+ P ++++ PPP + E SH QL
Sbjct: 214 PPPGQQQPTPQLQQQQQQQLQQHQQVPQQQQQHQQPPPT--HLQEQQL-------SH-QL 263
Query: 440 SHQAIRVLNLELQLEYGSEAWRSYLNTLQAL 532
+HQ R+++ +L A S+L L L
Sbjct: 264 AHQRNRMMSSQLTQLATPPAHASHLQQLNKL 294
>BT001369-1|AAN71124.1| 347|Drosophila melanogaster AT30804p
protein.
Length = 347
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 266 PSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQLSH 445
P PA+ + +++QQ+ +P + + + PPP GR + V + Q+ H
Sbjct: 163 PQQQMAPPAVVPQQQQMQQQYVQQPAAGQPTRMDPPPSGR---AHVHQQQVPHQQQQMQH 219
Query: 446 Q 448
Q
Sbjct: 220 Q 220
>AE014296-1651|AAF50277.2| 349|Drosophila melanogaster CG3982-PA
protein.
Length = 349
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 266 PSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQLSH 445
P PA+ + +++QQ+ +P + + + PPP GR + V + Q+ H
Sbjct: 166 PQQQMAPPAVVPQQQQMQQQYVQQPAAGQPTRMDPPPSGR---AHVHQQQVPHQQQQMQH 222
Query: 446 Q 448
Q
Sbjct: 223 Q 223
>D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.
Length = 1893
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 263 EPSSAFETPA--LQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPS 400
+PS+ +E LQ++ ++ QQ+ + S LPP P+G + P+
Sbjct: 1295 DPSTLYEIQQQQLQQQQQQQQQQQQQQQASPNFIALPPKPLGSLQSPN 1342
>AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p protein.
Length = 2051
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 263 EPSSAFETPA--LQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPS 400
+PS+ +E LQ++ ++ QQ+ + S LPP P+G + P+
Sbjct: 1466 DPSTLYEIQQQQLQQQQQQQQQQQQQQQASPNFIALPPKPLGSLQSPN 1513
>AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,
isoform A protein.
Length = 2051
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 263 EPSSAFETPA--LQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPS 400
+PS+ +E LQ++ ++ QQ+ + S LPP P+G + P+
Sbjct: 1466 DPSTLYEIQQQQLQQQQQQQQQQQQQQQASPNFIALPPKPLGSLQSPN 1513
>AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,
isoform B protein.
Length = 1882
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 263 EPSSAFETPA--LQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPS 400
+PS+ +E LQ++ ++ QQ+ + S LPP P+G + P+
Sbjct: 1297 DPSTLYEIQQQQLQQQQQQQQQQQQQQQASPNFIALPPKPLGSLQSPN 1344
>AE014296-331|AAF47547.2| 685|Drosophila melanogaster CG13930-PA
protein.
Length = 685
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 648 RRLNARNLAPLAVCTRLRSQFTEPICLRNWL 556
R ++ ++L PLAV RL S + EP+ W+
Sbjct: 375 RDISGQDLPPLAVSQRLSSPYFEPVTAIKWI 405
>BT015989-1|AAV36874.1| 1033|Drosophila melanogaster RE54250p protein.
Length = 1033
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +2
Query: 206 EEECRRYRPTKNYLENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPP 376
E++ +R + + A + A +R + V+Q P P R LPPPP
Sbjct: 875 EQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPP 931
>BT009956-1|AAQ22425.1| 1035|Drosophila melanogaster RH39293p protein.
Length = 1035
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +2
Query: 206 EEECRRYRPTKNYLENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPP 376
E++ +R + + A + A +R + V+Q P P R LPPPP
Sbjct: 876 EQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPP 932
>BT001259-1|AAN71015.1| 1500|Drosophila melanogaster AT02321p protein.
Length = 1500
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/30 (36%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +2
Query: 281 ETPALQREMERVQQRL-PMEPLSMKRYELP 367
+TP Q++ +++QQ+L P +PL ++++LP
Sbjct: 947 KTPQPQQQQQKLQQQLMPQQPLMPQQFQLP 976
>AY119507-1|AAM50161.1| 1015|Drosophila melanogaster GH12467p
protein.
Length = 1015
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/30 (36%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +2
Query: 281 ETPALQREMERVQQRL-PMEPLSMKRYELP 367
+TP Q++ +++QQ+L P +PL ++++LP
Sbjct: 462 KTPQPQQQQQKLQQQLMPQQPLMPQQFQLP 491
>AF233269-1|AAF34810.1| 2121|Drosophila melanogaster myosin VIIB
protein.
Length = 2121
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +2
Query: 206 EEECRRYRPTKNYLENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPP 376
E++ +R + + A + A +R + V+Q P P R LPPPP
Sbjct: 875 EQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPP 931
>AE014134-1309|AAN10638.1| 998|Drosophila melanogaster CG6976-PD,
isoform D protein.
Length = 998
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +2
Query: 206 EEECRRYRPTKNYLENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPP 376
E++ +R + + A + A +R + V+Q P P R LPPPP
Sbjct: 875 EQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPP 931
>AE014134-1308|AAF52536.2| 2121|Drosophila melanogaster CG6976-PA,
isoform A protein.
Length = 2121
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +2
Query: 206 EEECRRYRPTKNYLENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPP 376
E++ +R + + A + A +R + V+Q P P R LPPPP
Sbjct: 875 EQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPP 931
>AE014134-1307|AAN10637.1| 999|Drosophila melanogaster CG6976-PC,
isoform C protein.
Length = 999
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +2
Query: 206 EEECRRYRPTKNYLENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPP 376
E++ +R + + A + A +R + V+Q P P R LPPPP
Sbjct: 876 EQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPP 932
>AE014134-1306|AAN10636.1| 2122|Drosophila melanogaster CG6976-PB,
isoform B protein.
Length = 2122
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +2
Query: 206 EEECRRYRPTKNYLENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPP 376
E++ +R + + A + A +R + V+Q P P R LPPPP
Sbjct: 876 EQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPP 932
>AE013599-1697|AAF58379.1| 1503|Drosophila melanogaster CG4744-PA
protein.
Length = 1503
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/30 (36%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +2
Query: 281 ETPALQREMERVQQRL-PMEPLSMKRYELP 367
+TP Q++ +++QQ+L P +PL ++++LP
Sbjct: 950 KTPQPQQQQQKLQQQLMPQQPLMPQQFQLP 979
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,681,218
Number of Sequences: 53049
Number of extensions: 737685
Number of successful extensions: 2611
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2609
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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