Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27a22
(629 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910... 131 4e-31
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008... 128 3e-30
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 126 1e-29
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660... 122 3e-28
03_06_0470 + 34164873-34165856,34166335-34166568,34166680-341670... 36 0.020
07_01_0818 - 6548171-6548479,6550023-6550175,6550569-6550704,655... 32 0.33
05_03_0071 - 8044217-8045142,8045303-8045411,8045634-8046854 30 1.3
12_02_0705 + 22317657-22318529 29 2.3
09_03_0002 - 11387119-11387780,11388756-11388954,11389033-113891... 29 3.0
02_02_0141 - 7131260-7131581,7132124-7132430,7134018-7134076,713... 29 3.0
06_03_0315 + 19486006-19486250,19486346-19487281,19488823-194890... 29 4.0
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 29 4.0
04_04_0442 - 25229186-25229568,25229740-25232671 29 4.0
04_01_0596 - 7852529-7855185,7855545-7855581 29 4.0
06_03_0470 - 21113186-21114183,21114273-21115824 28 5.3
10_08_0075 - 14676835-14677173,14677776-14678426,14678734-146789... 28 7.0
08_01_0482 + 4236865-4236928,4237112-4237329 28 7.0
01_06_1069 + 34275823-34276167 28 7.0
11_06_0087 - 19919224-19922304 27 9.3
02_05_0602 + 30283893-30284170,30286259-30286305,30286534-302875... 27 9.3
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 27 9.3
>09_03_0038 +
11790075-11790302,11790397-11790542,11790915-11791017,
11791148-11791334,11791466-11791559,11791702-11791855,
11792189-11792305,11792695-11792808,11793629-11793811,
11794209-11794494,11794592-11794713,11794746-11794802,
11794803-11794900,11795036-11795213,11795355-11795455,
11795530-11795629,11795751-11795828,11796785-11796862,
11796956-11797138
Length = 868
Score = 131 bits (317), Expect = 4e-31
Identities = 75/170 (44%), Positives = 104/170 (61%)
Frame = +2
Query: 113 MVASKFQPTYARQAFPCFDEPDFKATYDIALVKPEGYVALSNMNEISVTRDPSSDLETVK 292
M ++F+ AR+ FPC+DEP FKA + + L P VALSNM T + ++T+
Sbjct: 136 MAVTQFEAVDARRCFPCWDEPAFKAKFKLTLEVPSELVALSNMPVACETI--AGPIKTIH 193
Query: 293 FATSVPMSTYLACFVVCDFGYKDVEINTSGIGNTFKLRSFAQKNELHKIDFAQDIGKRAT 472
+ S MSTYL VV F Y VE TS GN K+R + Q + + FA DIG ++
Sbjct: 194 YEESPLMSTYLVAIVVGLFDY--VEGVTSE-GN--KVRVYTQVGKSSQGKFALDIGVKSL 248
Query: 473 EFYIRYYEVEFPLPKLDMIAIPDYISGATEHWGLITYRETSFLVDEATAS 622
FY Y++ +PLPKLDM+AIPD+ +GA E++GL+TYRE S L DE ++S
Sbjct: 249 NFYKDYFDTPYPLPKLDMVAIPDFAAGAMENYGLVTYREVSLLFDEQSSS 298
>09_03_0039 +
11799277-11799486,11799565-11799710,11800758-11800860,
11800996-11801182,11801299-11801392,11801530-11801683,
11801963-11802067,11802151-11802267,11802688-11802801,
11803171-11803260,11803875-11804057,11809196-11809550,
11809574-11809643,11809993-11810167,11810251-11810351,
11810390-11810516,11810639-11810716,11811926-11812270
Length = 917
Score = 128 bits (310), Expect = 3e-30
Identities = 71/170 (41%), Positives = 104/170 (61%)
Frame = +2
Query: 113 MVASKFQPTYARQAFPCFDEPDFKATYDIALVKPEGYVALSNMNEISVTRDPSSDLETVK 292
M ++F+ AR+ FPC+DEP FKA + + L P VALSNM V + ++TV+
Sbjct: 130 MAVTQFESVDARRCFPCWDEPSFKAKFKLTLEVPSELVALSNMP--IVNEKIAGPIKTVE 187
Query: 293 FATSVPMSTYLACFVVCDFGYKDVEINTSGIGNTFKLRSFAQKNELHKIDFAQDIGKRAT 472
+ S MSTYL VV F Y +E TS GN K+R + Q + ++ FA D+G ++
Sbjct: 188 YEESPVMSTYLVAIVVGLFDY--IEGVTSE-GN--KVRVYTQVGKSNQGKFALDVGVKSL 242
Query: 473 EFYIRYYEVEFPLPKLDMIAIPDYISGATEHWGLITYRETSFLVDEATAS 622
Y +++ +PLPKLDM+AIPD+ +GA E++GL+TYRE L DE ++S
Sbjct: 243 NLYKEFFDTPYPLPKLDMVAIPDFTNGAMENYGLVTYREIYLLFDEQSSS 292
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 126 bits (305), Expect = 1e-29
Identities = 71/170 (41%), Positives = 101/170 (59%)
Frame = +2
Query: 113 MVASKFQPTYARQAFPCFDEPDFKATYDIALVKPEGYVALSNMNEISVTRDPSSDLETVK 292
M ++F+ AR+ FPC+DEP FKA + + L P VALSNM I T L+TV
Sbjct: 126 MAVTQFEAADARRCFPCWDEPAFKAKFKLTLEVPSELVALSNMPVIKET--VHGPLKTVY 183
Query: 293 FATSVPMSTYLACFVVCDFGYKDVEINTSGIGNTFKLRSFAQKNELHKIDFAQDIGKRAT 472
+ S MSTYL VV F Y I S + T K+R + Q + ++ FA D+ ++
Sbjct: 184 YEESPLMSTYLVAIVVGLFDY----IEGSTLEGT-KVRVYTQVGKSNQGKFALDVAVKSL 238
Query: 473 EFYIRYYEVEFPLPKLDMIAIPDYISGATEHWGLITYRETSFLVDEATAS 622
+ + Y+ +PLPKLDM+AIPD+ +GA E++GL+TYRET+ L DE +S
Sbjct: 239 DLFKDYFATPYPLPKLDMVAIPDFAAGAMENYGLVTYRETALLYDELLSS 288
>02_02_0080 +
6598427-6598663,6599246-6599391,6599567-6599669,
6600407-6600593,6600699-6600792,6601290-6601443,
6601751-6601855,6601937-6602053,6602248-6602361,
6602891-6603073,6603207-6603486,6603565-6603686,
6603763-6603860,6603941-6604118,6604439-6604553,
6604656-6604723,6604825-6604902,6604986-6605060,
6605156-6605338
Length = 878
Score = 122 bits (293), Expect = 3e-28
Identities = 66/166 (39%), Positives = 96/166 (57%)
Frame = +2
Query: 113 MVASKFQPTYARQAFPCFDEPDFKATYDIALVKPEGYVALSNMNEISVTRDPSSDLETVK 292
M ++F+P AR+ FPC+DEP FKA + I L P VALSNM + + ++ V
Sbjct: 139 MAVTQFEPADARRCFPCWDEPSFKAIFKITLEVPSETVALSNMPVVE--EKVNGLIKAVY 196
Query: 293 FATSVPMSTYLACFVVCDFGYKDVEINTSGIGNTFKLRSFAQKNELHKIDFAQDIGKRAT 472
F + MSTYL +V F Y + T G ++R + Q + + FA ++ +
Sbjct: 197 FQETPIMSTYLVAVIVGMFDYVEA-FTTDGT----RVRVYTQVGKSAQGKFALEVAVKTL 251
Query: 473 EFYIRYYEVEFPLPKLDMIAIPDYISGATEHWGLITYRETSFLVDE 610
+ Y+ V +PLPK+DMIAIPD+ SGA E++GL+TYRET+ L DE
Sbjct: 252 VLFKEYFAVPYPLPKMDMIAIPDFASGAMENYGLVTYRETALLFDE 297
>03_06_0470 +
34164873-34165856,34166335-34166568,34166680-34167006,
34168426-34168716
Length = 611
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2
Query: 116 VASKFQPTYARQAFPCFDEPDFKATYDIALVKPEGYVALSNMNEISVTRDP 268
V S+ Q +AR FPC D P + T+D+ L P A++ +S RDP
Sbjct: 126 VFSQCQSIHARSVFPCHDTPAARITFDLLLNVPTQLSAVAAARHVS-RRDP 175
>07_01_0818 -
6548171-6548479,6550023-6550175,6550569-6550704,
6550832-6551050,6551152-6551530,6551794-6552055,
6554132-6554200
Length = 508
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -2
Query: 463 LPNVLSKINLMKFIF-LSKRSKF--ESISDTRSINFNILISKITYNKTSQICRHWD 305
LP + ++ ++ +IF S K SI + ++FNIL K+ N+ +IC+ W+
Sbjct: 186 LPRTMKRVEVLNYIFEYSAEEKMFNPSILELAVLDFNIL-QKVHQNELKEICQWWE 240
>05_03_0071 - 8044217-8045142,8045303-8045411,8045634-8046854
Length = 751
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 357 RMLKLILLVSEILSNLDLLLKKMNFIRLILLKTLGRELLN 476
R+LKL+L++ + ++ + MN+I+ L +G+E LN
Sbjct: 678 RLLKLVLVLPVATAGVERVFSSMNYIKNKLRSKMGQEYLN 717
>12_02_0705 + 22317657-22318529
Length = 290
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = -1
Query: 305 HWSQI*QFLNQMMGPVSLIFHSCLTMPHTLRV*QVQYHMWL*NLAHQNKGMLGEHMLAEI 126
HW + + + + G + + +C T H+ + + H+W N ++Q K E+M E+
Sbjct: 96 HWGNVKKDIGKFCGVYAQVRRTC-TSGHSDDMIMEKAHLWYKNQSNQKKPFTLEYMWREL 154
Query: 125 YWLPLFIKMMGIYKKSIDF*KKNKEISSS 39
P K I KK + K+ K IS S
Sbjct: 155 KDQP---KWRSIIKKEENKNKRTK-ISES 179
>09_03_0002 -
11387119-11387780,11388756-11388954,11389033-11389106,
11389840-11390323,11390439-11390450
Length = 476
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 315 RHIWLVLLYVILDIRMLKLILLVSEILSNLDLLLKKMNFIRLILLKTLGRELLN 476
+HI L+Y +LKL+L++ ++++ + MN+++ L +G E LN
Sbjct: 394 KHINYTLVY-----ELLKLVLVIPVATTSVERVFSTMNYVKNKLRNRMGNEYLN 442
>02_02_0141 -
7131260-7131581,7132124-7132430,7134018-7134076,
7134586-7134667,7135972-7136047,7136382-7136443,
7136946-7137006
Length = 322
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 421 FLSKRSKFESISDTRSINFNILISKITYNKTSQICRHWDTG 299
+ K F SISD + L KITYNK + C+ + G
Sbjct: 223 YQGKSQSFTSISDATCVQD--LAKKITYNKRMKACKSYAAG 261
>06_03_0315 +
19486006-19486250,19486346-19487281,19488823-19489019,
19489044-19489246
Length = 526
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 85 KNQ*TFRKKTKKSLLVHEGGGDGDG 11
+ Q + K SL+VH+GGG+G+G
Sbjct: 411 RQQQWWEANNKGSLVVHDGGGEGEG 435
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -3
Query: 300 VANLTVSKSDDGSRVTDISFMFDNATYPSGLTSAISYVALKSGSSKQGNAWRAYVG*NLL 121
+ N V+ + + S +FD T G+ IS+ ++ S K NAW A + +
Sbjct: 307 ICNALVAMYSRCGSLEEASMIFDEITQ-RGIDDVISWNSIVSAHVKSSNAWTALDLFSKM 365
Query: 120 ATIVH 106
IVH
Sbjct: 366 TLIVH 370
>04_04_0442 - 25229186-25229568,25229740-25232671
Length = 1104
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -2
Query: 490 ISYVKFSSSLPNVLSKINLMKFIFLSKRSKFESISDTRSINFNILISKITYN 335
+SY S ++P+ L + L++ +FL+ I DT + ++L ++YN
Sbjct: 635 LSYNNLSGNIPSELGNLALLENLFLNNNKLTGEIPDTFANLSSLLEFNVSYN 686
>04_01_0596 - 7852529-7855185,7855545-7855581
Length = 897
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -3
Query: 300 VANLTVSKSDDGSRVTDISFMFDNATYPSGLTSAISYVALKSGSSKQGNAWRAYVG*NLL 121
+ N V+ + + S +FD T G+ IS+ ++ S K NAW A + +
Sbjct: 199 ICNALVAMYSRCGSLEEASMIFDEITQ-RGIDDVISWNSIVSAHVKSSNAWTALDLFSKM 257
Query: 120 ATIVH 106
IVH
Sbjct: 258 TLIVH 262
>06_03_0470 - 21113186-21114183,21114273-21115824
Length = 849
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 357 RMLKLILLVSEILSNLDLLLKKMNFIRLILLKTLGRELLN 476
R+LKL+L++ + ++ + MN+I+ L +G++ LN
Sbjct: 776 RLLKLVLVLPVATAGVERVFSSMNYIKNKLRTKMGQKYLN 815
>10_08_0075 -
14676835-14677173,14677776-14678426,14678734-14678948,
14679510-14679783,14680249-14680410
Length = 546
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +3
Query: 357 RMLKLILLVSEILSNLDLLLKKMNFIRLILLKTLGRELLN 476
++LK +L++ ++++ + MN+I+ L +G+E LN
Sbjct: 359 KLLKFVLVLPVATASVERVFSSMNYIKNKLRSKMGQEYLN 398
>08_01_0482 + 4236865-4236928,4237112-4237329
Length = 93
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/40 (25%), Positives = 25/40 (62%)
Frame = +3
Query: 357 RMLKLILLVSEILSNLDLLLKKMNFIRLILLKTLGRELLN 476
++LKL+L++ ++++ + MN+++ L +G + LN
Sbjct: 52 KLLKLVLILPVATASVERVFSSMNYVKNKLRNRMGEQYLN 91
>01_06_1069 + 34275823-34276167
Length = 114
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 64 KKTKKSLLVHEGGGDGDG 11
++ ++ +VH GGGDGDG
Sbjct: 28 RRVRRRPMVHAGGGDGDG 45
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 490 ISYVKFSSSLPNVLSKINLMKFIFLS 413
+SY FS ++PN+L+K+ L+ + L+
Sbjct: 744 LSYNMFSGNIPNILTKLKLLHHLNLA 769
>02_05_0602 +
30283893-30284170,30286259-30286305,30286534-30287510,
30287611-30287920,30288561-30290197
Length = 1082
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 323 LACFVVCDFGYKDVEINTSGIGNTFKLRSFAQKNELH-KIDFAQDIGK 463
L CF+V D KD+ T I T KL S +E H I F ++ K
Sbjct: 423 LLCFLVEDEEGKDIIGKTKAIARTIKLLSTNGTDERHAAISFLLELSK 470
>02_01_0451 -
3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -3
Query: 387 PIPEVLISTSLYPKSHTTKQARYVDIGTLVANLTVSKSDDGSRVTDISFMFDNATYP 217
PIPE ++ + YP + Y++ L L + + DG+RV D+ + F+ A P
Sbjct: 37 PIPEFVLPPA-YPLESPSSVKEYLEANYLNPELHLPTAADGARVWDLDW-FELARPP 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,424,442
Number of Sequences: 37544
Number of extensions: 339152
Number of successful extensions: 1032
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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