Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27a06
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-14|CAA96630.2| 383|Caenorhabditis elegans Hypothetical p... 76 3e-14
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 31 0.76
U23510-11|AAO38610.1| 444|Caenorhabditis elegans Hypothetical p... 30 1.3
U23510-10|AAC46780.1| 979|Caenorhabditis elegans Hypothetical p... 30 1.3
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 29 4.1
U53332-5|AAK31535.2| 821|Caenorhabditis elegans Related to yeas... 28 5.4
DQ178636-1|ABD75715.1| 826|Caenorhabditis elegans vacuolar prot... 28 5.4
U00050-12|AAA50700.2| 86|Caenorhabditis elegans Nematode speci... 27 9.4
AF016432-4|AAB65381.1| 501|Caenorhabditis elegans Udp-glucurono... 27 9.4
>Z72507-14|CAA96630.2| 383|Caenorhabditis elegans Hypothetical
protein F17C11.8 protein.
Length = 383
Score = 75.8 bits (178), Expect = 3e-14
Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Frame = +3
Query: 120 ENYLKRDKNVKIYDGDDK-TQFIDGEVLLTTHRLLWGKPGDIPKGLVCLSLHLYYVFCLE 296
E L + +V IY+GD K T F G LT R++W D + LV LH V +E
Sbjct: 14 EELLCQAGHVGIYEGDLKQTNFEQGTASLTMQRIIWADSSDPDRRLV---LHHSLVISME 70
Query: 297 EESGGVFGLGGPKRIIMHLGPALPGKRPGPAVVSPFHYVKLSFKDGVDTAFYKALSDAVA 476
+ +F GG +I++ L G GP S + ++L F+ G + F+K DAV
Sbjct: 71 KHHKSMFSKGG--KIVVKLEKPKAGNI-GPVNSSHYETLRLVFRHGGEDDFFKKYEDAVR 127
Query: 477 AKAWERQTPIDXXXXXXXXXXXXXXXXXXXNSKIRS-GIVGIERSIEEQHRATDQSISVA 653
K W+R + +S +RS GI GIER + E H+ T ++I+ A
Sbjct: 128 RKTWQRSS------------SGSSSSGSRASSNLRSVGISGIERRLAENHQKTHETITQA 175
Query: 654 FQDLTK 671
F D++K
Sbjct: 176 FDDMSK 181
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 385 GPGLFPGSAGPKCIIILFGPPRPNTPP 305
GP PG GPK I GPP P PP
Sbjct: 217 GPRGTPGPTGPKNFYITSGPPGPPGPP 243
>U23510-11|AAO38610.1| 444|Caenorhabditis elegans Hypothetical
protein R12C12.1b protein.
Length = 444
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 228 KPGDIPKGLVCLSLHLYYVFCLEEESGGVFGLGGPKRIIMHLGPALPG 371
+PGD + L+LH FC+ GG G+G P + HL P LPG
Sbjct: 181 RPGDYGSDVSHLNLHK--TFCIPHGGGGP-GVG-PIGVKKHLAPFLPG 224
>U23510-10|AAC46780.1| 979|Caenorhabditis elegans Hypothetical
protein R12C12.1a protein.
Length = 979
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 228 KPGDIPKGLVCLSLHLYYVFCLEEESGGVFGLGGPKRIIMHLGPALPG 371
+PGD + L+LH FC+ GG G+G P + HL P LPG
Sbjct: 716 RPGDYGSDVSHLNLHK--TFCIPHGGGGP-GVG-PIGVKKHLAPFLPG 759
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 474 QQRHLKLCKKQYLLHL*MIVSHSEMGSLLLDQAFSLAVQDLN 349
QQ+H K + + LHL H EM SLL+ Q ++ V D N
Sbjct: 1217 QQQHAKDWRGRTPLHLAAQNGHYEMVSLLIAQGSNINVMDQN 1258
>U53332-5|AAK31535.2| 821|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 35 protein.
Length = 821
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -3
Query: 360 QDLNALLFFLDPQDQIRHHFLLLNKTHNTDGEINKLSLLVYLLVFPIEVYVLLIE 196
Q+L A L L D + FLLLN T GE + L L E+Y L+++
Sbjct: 505 QNLVARLLHLIRADDVDSQFLLLNSARKTLGEGGRHRLRYTLPPIIFELYRLVLQ 559
>DQ178636-1|ABD75715.1| 826|Caenorhabditis elegans vacuolar protein
sorting factor protein.
Length = 826
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -3
Query: 360 QDLNALLFFLDPQDQIRHHFLLLNKTHNTDGEINKLSLLVYLLVFPIEVYVLLIE 196
Q+L A L L D + FLLLN T GE + L L E+Y L+++
Sbjct: 510 QNLVARLLHLIRADDVDSQFLLLNSARKTLGEGGRHRLRYTLPPIIFELYRLVLQ 564
>U00050-12|AAA50700.2| 86|Caenorhabditis elegans Nematode specific
peptide family,group b protein 12 protein.
Length = 86
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 254 SLFISPSVLCVLFRRRKWWRIWSWGSKKN-NNAFRSCTAREKAWSSSSEP 400
S + PSV + +W+WGS KN ++A AR A ++ +P
Sbjct: 34 SAYAYPSVYSPYVAAAAYPSVWAWGSNKNKDDAAPRAFARPSALLNNQKP 83
>AF016432-4|AAB65381.1| 501|Caenorhabditis elegans
Udp-glucuronosyltransferase protein64 protein.
Length = 501
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 201 LTTHRLLWGKPGDIPKGL 254
LT +R++W GD PKGL
Sbjct: 322 LTEYRVIWSMKGDRPKGL 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,075,554
Number of Sequences: 27780
Number of extensions: 351060
Number of successful extensions: 984
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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