Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26p22
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.3  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   3.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   5.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   7.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.6  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 385 TNSYRIYIHSLHYQRIPQVSICPLISCQALRNQ 287
           T+ + +++H     RIP+ +  PL+  + L  Q
Sbjct: 92  TSLHELHVHGCKVLRIPEGAFQPLLELKKLTVQ 124


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 464 WIFTVESMVAQFMKPC 511
           WIFT+ S+V  F+  C
Sbjct: 491 WIFTIASIVGTFIILC 506


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 379 YWLGTTKPCITYGLRGISYYFL 444
           YW+ +++  +   +RG  YYFL
Sbjct: 243 YWMSSSQYHMPKEIRGQLYYFL 264


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 379 YWLGTTKPCITYGLRGISYYFL 444
           YW+ +++  +   +RG  YYFL
Sbjct: 243 YWMSSSQYHMPKEIRGQLYYFL 264


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
 Frame = +1

Query: 223 YKGTGAELPVNLKFIFECMEESGSEGLDSLL---MDKLKPEG 339
           Y   GA+ P N  FI     +S S     L+   M  + P G
Sbjct: 297 YYDYGADFPFNFAFIKNVSRDSNSSDFKKLIDNWMTYMPPSG 338


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
 Frame = +1

Query: 223 YKGTGAELPVNLKFIFECMEESGSEGLDSLL---MDKLKPEG 339
           Y   GA+ P N  FI     +S S     L+   M  + P G
Sbjct: 297 YYDYGADFPFNFAFIKNVSRDSNSSDFKKLVDNWMTYMPPSG 338


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 303 KPFGTRFLHTFENELQIDRQLST 235
           KPF  R  H    +L +DR + T
Sbjct: 105 KPFQIRMKHGLIRDLIVDRDVPT 127


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 223 YKGTGAELPVNLKFIFECMEESGSEGLDSLLMDKLK 330
           Y   G+ +P N KFI +    S  E    ++ + +K
Sbjct: 310 YYEVGSNVPFNFKFITDANSSSTPEQFKVIIDNWIK 345


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 589 LPIYICQSPISSHLCPRVYSS 527
           L  ++  SP+    C RV+SS
Sbjct: 42  LNFFVATSPVIGEPCQRVHSS 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.139    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,234
Number of Sequences: 438
Number of extensions: 4177
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)