Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26p04
         (246 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical ...   104   1e-23
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    28   1.0  
AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical ...    27   2.3  
AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical ...    27   2.3  
AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical ...    27   2.3  
Z72507-1|CAA96633.2|  172|Caenorhabditis elegans Hypothetical pr...    26   3.1  
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ...    26   4.1  
Z81115-4|CAB03294.2|  651|Caenorhabditis elegans Hypothetical pr...    25   7.1  
Z75532-3|CAA99810.1|  660|Caenorhabditis elegans Hypothetical pr...    25   7.1  
AL132902-7|CAB81993.1|  485|Caenorhabditis elegans Hypothetical ...    25   7.1  
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr...    25   9.4  
Z81529-4|CAB04295.1|  272|Caenorhabditis elegans Hypothetical pr...    25   9.4  
Z81097-17|CAF31479.2|  269|Caenorhabditis elegans Hypothetical p...    25   9.4  

>AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical
           protein Y48B6A.2 protein.
          Length = 91

 Score =  104 bits (249), Expect = 1e-23
 Identities = 42/71 (59%), Positives = 56/71 (78%)
 Frame = +1

Query: 1   GASLRKMVKKMEVTXHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASS 180
           GASLRKM KK+EV  H++YTCSFCGK+AMKR   GIW+C +C + VAGGA+V+ T  A++
Sbjct: 19  GASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKCHKVVAGGAYVYGTVTAAT 78

Query: 181 CRSAVXRLREV 213
            RS + RLR++
Sbjct: 79  VRSTIRRLRDL 89


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 52  KYTCSFCGKDAMKRSCVGIWSCKRC 126
           KY C+ C      R   G+WSCK C
Sbjct: 232 KYECAICYTRITTRQ--GVWSCKTC 254


>AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical
           protein F16B4.2a protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 88  KRSCVGIWSCKRCKRTVAGGAWVFSTT 168
           K  C+  W+C  C +T+   +W F +T
Sbjct: 333 KEKCILDWTCSTCDKTIE--SWYFRST 357


>AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical
           protein F16B4.2b protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 88  KRSCVGIWSCKRCKRTVAGGAWVFSTT 168
           K  C+  W+C  C +T+   +W F +T
Sbjct: 338 KEKCILDWTCSTCDKTIE--SWYFRST 362


>AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical
           protein C15F1.5a protein.
          Length = 381

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +1

Query: 10  LRKMVKKMEVTXHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFST 165
           L+K  KKM V   A    S    + M  +C G    + C+R + G A +  T
Sbjct: 32  LKKSTKKMRVCPVAHCYSSLTAPEPMTSTCEG----ENCQRKIMGNAEILRT 79


>Z72507-1|CAA96633.2|  172|Caenorhabditis elegans Hypothetical
           protein F17C11.1 protein.
          Length = 172

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 70  CGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRS 189
           CGK  + R+C  +    +C        W F+TTAA++  S
Sbjct: 69  CGKSPVNRNCTALVPDSKCV-----FKWAFATTAAATACS 103


>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
            protein Y8A9A.2 protein.
          Length = 1360

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 58   TCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSC 183
            TC  CG++  KR C+ +     C     G A   S  A+S C
Sbjct: 1119 TCGSCGQETRKRKCLSLQYGCAC----TGNATDTSVCASSVC 1156


>Z81115-4|CAB03294.2|  651|Caenorhabditis elegans Hypothetical
           protein T05D4.4 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 142 LLQSSCIAYKTRCRHKNVS 86
           +++  C +YKT C+HK V+
Sbjct: 125 VIKKFCPSYKTACKHKAVT 143


>Z75532-3|CAA99810.1|  660|Caenorhabditis elegans Hypothetical
           protein C54G10.3 protein.
          Length = 660

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 64  SFCGKDAMKRSCVGIWSCKRCK 129
           S CGK ++ R   G+W C   K
Sbjct: 459 SGCGKSSLLRMFAGLWHCSSGK 480


>AL132902-7|CAB81993.1|  485|Caenorhabditis elegans Hypothetical
          protein Y71A12B.8 protein.
          Length = 485

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 26 KRWKXPXTQSILAHFVVR 79
          KRWK P  QS    F+VR
Sbjct: 28 KRWKTPLRQSNSVRFIVR 45


>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
           protein W09G3.6 protein.
          Length = 1125

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 85  MKRSCVGIWSCKRCKRTVAGGAWVFSTTAASS 180
           +K +CV   S   C  T  G  ++FS  AA S
Sbjct: 46  VKYTCVASTSKSLCLGTSTGSVYIFSRYAAKS 77


>Z81529-4|CAB04295.1|  272|Caenorhabditis elegans Hypothetical
           protein F35E8.6 protein.
          Length = 272

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 76  KDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAA 174
           +D + ++C    +CKRC  T A  A   +TTAA
Sbjct: 177 QDFVNKNCQK--TCKRCPATTAAPAAGVTTTAA 207


>Z81097-17|CAF31479.2|  269|Caenorhabditis elegans Hypothetical
           protein K07A1.16 protein.
          Length = 269

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +1

Query: 31  MEVTXHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASS 180
           +E+T      C F  +DA+   C  + +C R  + +  G +VF    A++
Sbjct: 70  VEITVIELANCYF-QRDAVAHPCPLVTNCYRKSKAIRRGIYVFLVQLAAA 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,889,833
Number of Sequences: 27780
Number of extensions: 81880
Number of successful extensions: 282
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 12,740,198
effective HSP length: 61
effective length of database: 11,045,618
effective search space used: 220912360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)