Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26p04
         (246 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    28   0.020
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    28   0.020
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   1.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   2.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      20   3.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   3.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   5.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    19   6.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   9.1  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    19   9.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                19   9.1  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 0.020
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 49  AKYTCSFCGKDAMKRSCVGIWSCKRCK 129
           +K+ CS CG  A  +   G++SC+ CK
Sbjct: 106 SKHLCSICGDRASGKH-YGVYSCEGCK 131


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 0.020
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 49  AKYTCSFCGKDAMKRSCVGIWSCKRCK 129
           +K+ CS CG  A  +   G++SC+ CK
Sbjct: 106 SKHLCSICGDRASGKH-YGVYSCEGCK 131


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +1

Query: 40  TXHAKYTCSFCGK 78
           T    YTC  CGK
Sbjct: 227 TGEKPYTCDICGK 239


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 123 SLTRPDADTRTFHSIL 76
           + TRP   T TFH IL
Sbjct: 334 TFTRPCGITLTFHEIL 349


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +1

Query: 55  YTCSFCGK 78
           YTC  CGK
Sbjct: 372 YTCDVCGK 379



 Score = 19.4 bits (38), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 194 TADLHDEAAVVENTQAPP 141
           T D HDE A      +PP
Sbjct: 183 TPDPHDETAKKPRVLSPP 200


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 109 RCRHKNVS*HPYHK 68
           +CR+ N S  PY+K
Sbjct: 435 QCRYPNASVTPYNK 448


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 5.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 46  HAKYTCSFCG 75
           H +YTC  CG
Sbjct: 480 HDEYTCMDCG 489


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +1

Query: 82  AMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRS 189
           A   +C GI S  + +  +    WV  +   ++ RS
Sbjct: 111 AKNENCSGITSAYKIEIDMCDRLWVLDSGLINNVRS 146


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 8/40 (20%), Positives = 15/40 (37%)
 Frame = -2

Query: 230  YYLNXFTSRNLXTADLHDEAAVVENTQAPPATVLLHRLQD 111
            Y+L       +  +D  D   ++   +AP       R+ D
Sbjct: 948  YHLRIVAENEIGASDPSDTVTIITAEEAPSGPPTSIRVDD 987


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
          finger domain-Z2 isoform protein.
          Length = 71

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 55 YTCSFCGK 78
          +TC  CGK
Sbjct: 6  FTCQLCGK 13


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 5   PLYVKWSKR 31
           P Y+KW+ R
Sbjct: 475 PRYIKWTNR 483


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,462
Number of Sequences: 438
Number of extensions: 1119
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4275738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)