Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26o23
         (643 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    24   1.4  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    24   1.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.7  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   7.7  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +1

Query: 433 AEDNNATRLEDVQNDTNHYIDDADSGSLSSEPLI 534
           AED    R       T   IDD D G+L +EP I
Sbjct: 39  AEDK--ARCMSEHGTTQAQIDDVDKGNLVNEPSI 70


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +1

Query: 433 AEDNNATRLEDVQNDTNHYIDDADSGSLSSEPLI 534
           AED    R       T   IDD D G+L +EP I
Sbjct: 39  AEDK--ARCMSEHGTTQAQIDDVDKGNLVNEPSI 70


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 323 PHSGSKC*SVSRPYSRLHTK 382
           P+SGSKC      Y R++ K
Sbjct: 64  PYSGSKCTWTITSYHRINLK 83


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 382 LRMQPGVGSAHRSALASGMRS 320
           + +QPG  +  R+  ASG RS
Sbjct: 19  IAIQPGSNALSRNVEASGQRS 39


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/25 (32%), Positives = 10/25 (40%)
 Frame = -2

Query: 156 RSTAPAQTRVYNWPLDAWNCHHNLG 82
           +  A   T   +WP D   C  N G
Sbjct: 164 KHVAKCATDFSSWPYDTHRCRINFG 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,717
Number of Sequences: 438
Number of extensions: 3743
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)