Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26o19
(695 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 110 2e-25
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 94 2e-20
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 84 2e-17
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 29 0.48
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 27 1.9
SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator ... 27 1.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 4.5
SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor |Schizo... 26 4.5
SPAC688.06c |slx4||structure-specific endonuclease subunit |Schi... 26 5.9
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 110 bits (265), Expect = 2e-25
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
Frame = +3
Query: 228 IKSYAGYFTVNKTYDSNQFFWYFPAMVPNSKNAPIIVWLQGGPGATSLYGLFTENGP--L 401
+K Y GY V D + FFW+F + + +N P+++WL GGPG +SL GLF E GP +
Sbjct: 586 VKQYTGYLDVED--DRHLFFWFFESR-NDPENDPVVLWLNGGPGCSSLTGLFMELGPSSI 642
Query: 402 RVRNKKFERRKYNWALSHHIIYIDNPVGTGFSFTKDPKGYCVDETQVGEQLYSTLIQFFQ 581
+ K E ++W + +I++D P+ TGFS D +D G+ +Y+ L FF
Sbjct: 643 NIETLKPEYNPHSWNSNASVIFLDQPINTGFSNGDDS---VLDTVTAGKDVYAFLNLFFA 699
Query: 582 LFPELQTNNFFVTGESYGGKYVPALAYTIHKKNPTA 689
FP+ +F + GESY G Y+P A I + N A
Sbjct: 700 KFPQYAHLDFHIAGESYAGHYIPQFAKEIMEHNQGA 735
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 93.9 bits (223), Expect = 2e-20
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Frame = +3
Query: 231 KSYAGYFTVNKTYDSNQFFWYFPAMVPNSKNAPIIVWLQGGPGATSLYGLFTENGPLRVR 410
+ +AG+ D + FFW F ++ P ++ I+ WL GGPG +S G E GP R+
Sbjct: 44 RMHAGHLNQTDQLDGDLFFWMFESVKPEYEHRSIL-WLNGGPGCSSEDGSLMEVGPFRLD 102
Query: 411 -NKKFERRKYNWALSHHIIYIDNPVGTGFSFTKDPKGYCVDETQVGEQLYSTLIQFFQLF 587
N F+ W +++++D P+GTG+S++ K + + ++ +F + F
Sbjct: 103 DNNTFQLNPGRWDELGNLLFVDQPLGTGYSYSL-AKDFQSNNEKMANDFSIFFEKFLEEF 161
Query: 588 PELQTNNFFVTGESYGGKYVPALAYTIHKKN 680
PE + +F+ GES+ G+Y+P +A + +KN
Sbjct: 162 PERANDEWFIAGESFAGQYIPHIAAKLKEKN 192
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 84.2 bits (199), Expect = 2e-17
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Frame = +3
Query: 192 RLARVPFTESLRIKSYAGYFTVNKTYDSNQFFWYFPAMVPNSKNAPIIVWLQGGPGATSL 371
R+ +P + + Y+GY N D + F+ Y PA+V + IVWLQGGPG
Sbjct: 60 RIKSLPEFKGSLPELYSGYLEANS--DKSLFYTYAPAVVDSET---FIVWLQGGPGCAGT 114
Query: 372 YGLFTENGPLRV--RNKKFERRKYNWALSHHIIYIDNPVGTGFSFTKDPKGYCVDETQVG 545
G F+ENGP+ + + +W +++++D P GTG+S + Y +
Sbjct: 115 LGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYS--QGQAAYTTTIEEAS 172
Query: 546 EQLYSTLIQFFQLFPELQTNNFFVTGESYG 635
+ L F+Q FP L ++ GESYG
Sbjct: 173 SDFVNALKSFYQKFPHLMKKKLYLVGESYG 202
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 29.5 bits (63), Expect = 0.48
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 202 EYHLLKACALK--VMQATSR*IRLTTPTSSSGTFL 300
E+H + + LK VMQ R +RLT P SGT++
Sbjct: 240 EWHSMLSSVLKGDVMQTEKRRLRLTEPDGHSGTYI 274
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1328
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +3
Query: 261 KTYDSNQFFWYFPAMVPNSKNAPIIVWLQGGPGATSLYG 377
K + ++ + PA + K+ +I+WL PG + +G
Sbjct: 905 KAFHLGEYNYGRPAQITGCKDNKLIIWLSTAPGLDAQWG 943
>SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -2
Query: 445 AQLYFRLSNFLLRTLKGPFSVKSP-YRDVAPGPPWSQTIIGAFLLFGT-IAGKY 290
+ LYF F+ KGPF SP D+ P WS+ G ++ + KY
Sbjct: 252 SNLYFSAIKFINVMKKGPFYEHSPILYDITAVPIWSKVNQGLIKMYDVEVLSKY 305
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 211 LLKACALKVMQATSR*IRLTTPTSSSGTFLLWFRTAKTHRLSSGSKEAPALHLCMDSSQK 390
LL A +++ T RL TS+S T+LL +A H +SS P+L ++ K
Sbjct: 2264 LLFVSAHEILDLTEEVNRLAVSTSNS-TYLLKSASAVYHNVSSFKGSTPSLWNLLNQFSK 2322
Query: 391 TVL 399
++
Sbjct: 2323 FLI 2325
>SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 512
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 675 SCELCRPELVHTFLHMILQSQKN 607
S E+C PE +FL + LQ++K+
Sbjct: 168 SAEMCEPETRLSFLQLALQAEKS 190
>SPAC688.06c |slx4||structure-specific endonuclease subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -1
Query: 302 SRKVPEELVGVVSLIYREVACITFNAQAFSKWYSG*TPPCSDVTAFHIWRKEQRL 138
S K E +V+ +R ++ + A+ S W T DV F +W K + L
Sbjct: 342 STKTVLEFDDIVTQTHRAISQVVKQAKDNSVWIKILTYSAIDVEEFQLWLKRKNL 396
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,030,390
Number of Sequences: 5004
Number of extensions: 63451
Number of successful extensions: 155
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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