Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26o04
(156 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 19 5.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 5.6
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 19 5.6
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 19 7.4
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 19 7.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 18 9.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 18 9.8
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 18 9.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 18 9.8
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 18 9.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 18 9.8
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 18 9.8
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -2
Query: 146 RSKYIQKIYQPCMTKFINVIHKY 78
+++Y KIY + + NV+ K+
Sbjct: 248 KTEYTLKIYTHDIPETYNVVRKF 270
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.0 bits (37), Expect = 5.6
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = +2
Query: 2 FVIECYTRYD 31
+ + CY RYD
Sbjct: 456 YEVRCYPRYD 465
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -2
Query: 146 RSKYIQKIYQPCMTKFINVIHKY 78
+++Y KIY + + NV+ K+
Sbjct: 248 KTEYTLKIYTHDIPETYNVVRKF 270
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 18.6 bits (36), Expect = 7.4
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -2
Query: 110 MTKFINVIHKY 78
+T +NVIHK+
Sbjct: 32 LTNTLNVIHKW 42
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 18.6 bits (36), Expect = 7.4
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 114 WLIYFLNIFT 143
WL +F+ IFT
Sbjct: 410 WLSFFIVIFT 419
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 18.2 bits (35), Expect = 9.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 89 IHKYL*NSKTLQYCRIRLIYRI 24
IH N K LQY I I +I
Sbjct: 90 IHNNNNNYKKLQYYNINYIEQI 111
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 18.2 bits (35), Expect = 9.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 89 IHKYL*NSKTLQYCRIRLIYRI 24
IH N K LQY I I +I
Sbjct: 90 IHNNNNNYKKLQYYNINYIEQI 111
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 18.2 bits (35), Expect = 9.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 89 IHKYL*NSKTLQYCRIRLIYRI 24
IH N K LQY I I +I
Sbjct: 90 IHNNNNNYKKLQYYNINYIEQI 111
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 18.2 bits (35), Expect = 9.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 89 IHKYL*NSKTLQYCRIRLIYRI 24
IH N K LQY I I +I
Sbjct: 90 IHNNNNNYKKLQYYNINYIEQI 111
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 18.2 bits (35), Expect = 9.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 116 PCMTKFINVI 87
PC+T F NV+
Sbjct: 197 PCLTLFGNVL 206
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 18.2 bits (35), Expect = 9.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 89 IHKYL*NSKTLQYCRIRLIYRI 24
IH N K LQY I I +I
Sbjct: 323 IHNNNNNYKKLQYYNINYIEQI 344
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 18.2 bits (35), Expect = 9.8
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = +3
Query: 93 IDKFSHTWLI 122
IDKF W++
Sbjct: 133 IDKFDRLWIL 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,363
Number of Sequences: 438
Number of extensions: 648
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used: 2655300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -