Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26m24
(580 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071567-1|AAL49189.1| 122|Drosophila melanogaster RE63168p pro... 86 3e-17
AE014296-2913|AAF49338.1| 122|Drosophila melanogaster CG7603-PA... 86 3e-17
AY070824-1|AAL48446.1| 169|Drosophila melanogaster AT26906p pro... 46 5e-05
AE014298-1468|AAF46603.2| 169|Drosophila melanogaster CG15296-P... 46 5e-05
AE013599-2405|AAM68492.2| 396|Drosophila melanogaster CG30459-P... 43 3e-04
AE014134-2074|AAF53104.1| 129|Drosophila melanogaster CG14929-P... 36 0.040
X00041-1|CAA24923.1| 1089|Drosophila melanogaster GART protein. 33 0.21
J02527-1|AAA28563.1| 1353|Drosophila melanogaster Gart polypepti... 33 0.21
AE014134-1213|AAF52474.2| 1353|Drosophila melanogaster CG31628-P... 33 0.21
AY089629-1|AAL90367.1| 229|Drosophila melanogaster RE41295p pro... 30 2.0
AE014298-2859|AAF48965.1| 377|Drosophila melanogaster CG12233-P... 30 2.0
AE014298-2858|AAN09496.1| 354|Drosophila melanogaster CG12233-P... 30 2.0
M73271-1|AAA28574.1| 906|Drosophila melanogaster glutamate rece... 29 4.5
>AY071567-1|AAL49189.1| 122|Drosophila melanogaster RE63168p
protein.
Length = 122
Score = 86.2 bits (204), Expect = 3e-17
Identities = 39/109 (35%), Positives = 64/109 (58%)
Frame = +1
Query: 112 MLKFGVKSVLLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKSQVPYELPALP 291
+L F V+ L+ + VYYT G+W DS T +Y++++ + P+V +L+ Q+P+E+P LP
Sbjct: 2 VLGFLVRGGLVAATVYYTQKVGIWGDSDQTDKLYNDIKSELRPHVQKLEKQLPFEVPQLP 61
Query: 292 SNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISSSLETP 438
+ +L K+Y+N GVK TFRF+ LP + K D ++P
Sbjct: 62 KTGEMRFLAKHYYNEGVKNTFRFIHMLPCYAGRGLKKVKDTFQDFAQSP 110
>AE014296-2913|AAF49338.1| 122|Drosophila melanogaster CG7603-PA
protein.
Length = 122
Score = 86.2 bits (204), Expect = 3e-17
Identities = 39/109 (35%), Positives = 64/109 (58%)
Frame = +1
Query: 112 MLKFGVKSVLLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKSQVPYELPALP 291
+L F V+ L+ + VYYT G+W DS T +Y++++ + P+V +L+ Q+P+E+P LP
Sbjct: 2 VLGFLVRGGLVAATVYYTQKVGIWGDSDQTDKLYNDIKSELRPHVQKLEKQLPFEVPQLP 61
Query: 292 SNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISSSLETP 438
+ +L K+Y+N GVK TFRF+ LP + K D ++P
Sbjct: 62 KTGEMRFLAKHYYNEGVKNTFRFIHMLPCYAGRGLKKVKDTFQDFAQSP 110
>AY070824-1|AAL48446.1| 169|Drosophila melanogaster AT26906p
protein.
Length = 169
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/97 (28%), Positives = 47/97 (48%)
Frame = +1
Query: 106 FTMLKFGVKSVLLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKSQVPYELPA 285
FT L + +V + VY T GVW + T + D++ G+ P G L+ + +
Sbjct: 2 FTTLMYRTAAVSM--TVYITNRVGVWGKTEETDHLLDQITNGLQPVFGLLRRTLKLD--- 56
Query: 286 LPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAA 396
S+ + L + Y+N GVK TFR + +P ++ A
Sbjct: 57 -ESDLSVGELSRKYYNEGVKGTFRIIRNIPNYSEELA 92
>AE014298-1468|AAF46603.2| 169|Drosophila melanogaster CG15296-PA
protein.
Length = 169
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/97 (28%), Positives = 47/97 (48%)
Frame = +1
Query: 106 FTMLKFGVKSVLLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKSQVPYELPA 285
FT L + +V + VY T GVW + T + D++ G+ P G L+ + +
Sbjct: 2 FTTLMYRTAAVSM--TVYITNRVGVWGKTEETDHLLDQITNGLQPVFGLLRRTLKLD--- 56
Query: 286 LPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAA 396
S+ + L + Y+N GVK TFR + +P ++ A
Sbjct: 57 -ESDLSVGELSRKYYNEGVKGTFRIIRNIPNYSEELA 92
>AE013599-2405|AAM68492.2| 396|Drosophila melanogaster CG30459-PA
protein.
Length = 396
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/96 (26%), Positives = 43/96 (44%)
Frame = +1
Query: 148 SAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKSQVPYELPALPSNDRISYLFKYY 327
+ V T + GVW+ T +YDE + + PY + + ++ P P S+ YY
Sbjct: 169 AVVMVTKNYGVWESPNKTQDVYDETVERIEPYADQARRKLNICPPRPPPEGEWSFFGIYY 228
Query: 328 WNCGVKATFRFLVELPTHTSNAAFKTYDFISSSLET 435
+N VK+ F L P + K ++++ ET
Sbjct: 229 YNKLVKSVFDLLSVFPAGLAAFLEKVPSYVNAFNET 264
>AE014134-2074|AAF53104.1| 129|Drosophila melanogaster CG14929-PA,
isoform A protein.
Length = 129
Score = 35.9 bits (79), Expect = 0.040
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 112 MLKFGVKSVLLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKSQ 264
M F ++ L+ AVY T + G+W+ S T +++ ++ +SPY +L ++
Sbjct: 1 MAFFLIRLALVAGAVYGTQELGIWESSDHTKVLFEGAKREVSPYAEDLMNR 51
>X00041-1|CAA24923.1| 1089|Drosophila melanogaster GART protein.
Length = 1089
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 214 DELEKGMSPYVGELKSQVPYELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTH 381
++LEK SP+ G ++P EL LPSN +S + C A R L +PTH
Sbjct: 729 EQLEKVASPFGGLGDRELPEELKKLPSNSDLSAPRE---ECFENAAGRRLTRIPTH 781
>J02527-1|AAA28563.1| 1353|Drosophila melanogaster Gart polypeptide
4.7 kb transcript protein.
Length = 1353
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 214 DELEKGMSPYVGELKSQVPYELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTH 381
++LEK SP+ G ++P EL LPSN +S + C A R L +PTH
Sbjct: 788 EQLEKVASPFGGLGDRELPEELKKLPSNSDLSAPRE---ECFENAAGRRLTRIPTH 840
>AE014134-1213|AAF52474.2| 1353|Drosophila melanogaster CG31628-PA,
isoform A protein.
Length = 1353
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 214 DELEKGMSPYVGELKSQVPYELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTH 381
++LEK SP+ G ++P EL LPSN +S + C A R L +PTH
Sbjct: 788 EQLEKVASPFGGLGDRELPEELKKLPSNSDLSAPRE---ECFENAAGRRLTRIPTH 840
>AY089629-1|AAL90367.1| 229|Drosophila melanogaster RE41295p
protein.
Length = 229
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 401 LKAALLVWVGNSTKNLNVALTPQFQ*YLNKYDILSLEG 288
LK L+ VG ++LN+AL +F Y N SLEG
Sbjct: 88 LKGPLMTPVGKGHRSLNLALRKEFNLYANVRPCRSLEG 125
>AE014298-2859|AAF48965.1| 377|Drosophila melanogaster CG12233-PB,
isoform B protein.
Length = 377
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 401 LKAALLVWVGNSTKNLNVALTPQFQ*YLNKYDILSLEG 288
LK L+ VG ++LN+AL +F Y N SLEG
Sbjct: 111 LKGPLMTPVGKGHRSLNLALRKEFNLYANVRPCRSLEG 148
>AE014298-2858|AAN09496.1| 354|Drosophila melanogaster CG12233-PA,
isoform A protein.
Length = 354
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 401 LKAALLVWVGNSTKNLNVALTPQFQ*YLNKYDILSLEG 288
LK L+ VG ++LN+AL +F Y N SLEG
Sbjct: 88 LKGPLMTPVGKGHRSLNLALRKEFNLYANVRPCRSLEG 125
>M73271-1|AAA28574.1| 906|Drosophila melanogaster glutamate
receptor subunit protein.
Length = 906
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 352 FRFLVELPTHTSNAAFKTYDFISSSLETPEPHQEKDK 462
F L+ L T+T+N AF T + SS+++P+ E+DK
Sbjct: 636 FFALMMLSTYTANLAFLTSNKWQSSIKSPQDLIEQDK 672
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,612,924
Number of Sequences: 53049
Number of extensions: 491321
Number of successful extensions: 957
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -