Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26m17
         (238 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1557 - 27699675-27699972,27700546-27700630,27700741-277008...    25   6.5  
04_03_0974 + 21367304-21369634                                         25   8.6  

>07_03_1557 -
           27699675-27699972,27700546-27700630,27700741-27700847,
           27700942-27701135,27701252-27701368,27701466-27701631,
           27701723-27701887,27702185-27703428
          Length = 791

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = -2

Query: 192 KNFTFEVQDLKRQAEKKS--LANYTFLYWNQINKILSHQHIWFHEFRR 55
           + F  +   L R  +K    +  YT L    +N I   +  WFHEF+R
Sbjct: 582 RRFDLKGSSLGRTTDKPQTEIDQYTTLKDLDLNFIFRLKKQWFHEFQR 629


>04_03_0974 + 21367304-21369634
          Length = 776

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 183 TFEVQDLKRQAEKKS-LANYTFLYWNQI 103
           T +V  +KR  +  + + NY FL WN++
Sbjct: 733 TVQVSQVKRSRDGDNYIGNYGFLSWNEV 760


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,609,764
Number of Sequences: 37544
Number of extensions: 44617
Number of successful extensions: 76
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 14,793,348
effective HSP length: 57
effective length of database: 12,653,340
effective search space used: 265720140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)