Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26m16
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.2  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   5.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.8  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   9.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 182  NRRRMNRKQKSTGNVQCSIVKEAWNNKKTSAR 277
            +RRR  RKQ++ G+V+ S   E+  ++ TS+R
Sbjct: 1766 SRRRQQRKQQTPGDVE-SDESESDPDQLTSSR 1796


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 182  NRRRMNRKQKSTGNVQCSIVKEAWNNKKTSAR 277
            +RRR  RKQ++ G+V+ S   E+  ++ TS+R
Sbjct: 1762 SRRRQQRKQQTPGDVE-SDESESDPDQLTSSR 1792


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 224 VQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKI 328
           +   IV+   N+ +   + L E   +SDPN  IKI
Sbjct: 83  ISSDIVRAVLNDNEAD-QLLAECSPISDPNALIKI 116


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 400  HFFI*IDLVYHLFRPLNLSL 341
            HF   ID   H++ PL +SL
Sbjct: 990  HFISGIDSNLHVYAPLKISL 1009


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 385 IDLVYHLFRPLNLSLFE 335
           ID V HLF   N+SL E
Sbjct: 229 IDAVPHLFESANISLDE 245


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 611 IKTFMGIPAQYSVYLQERGNAG 676
           I  F G+P+  +V   + GN G
Sbjct: 78  IMKFNGVPSSLNVITNKTGNGG 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,132
Number of Sequences: 438
Number of extensions: 3738
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)