Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26m12
         (350 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051518-1|AAK92942.1|  478|Drosophila melanogaster GH17311p pro...    43   1e-04
AE014298-1225|AAF46409.1|  478|Drosophila melanogaster CG1785-PA...    43   1e-04
U42425-1|AAC46999.1|  711|Drosophila melanogaster DmMstProx prot...    27   6.7  
AF247769-1|AAF86229.1|  785|Drosophila melanogaster Toll-3 protein.    27   6.7  
AE014297-608|AAF54021.3|  965|Drosophila melanogaster CG1149-PA ...    27   6.7  
AE013599-1927|AAF58226.1|  107|Drosophila melanogaster CG12862-P...    27   6.7  

>AY051518-1|AAK92942.1|  478|Drosophila melanogaster GH17311p
           protein.
          Length = 478

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 21/32 (65%), Positives = 23/32 (71%)
 Frame = +1

Query: 112 AWRKHCDIKDVENFLEXQRLEERLGKFETKPD 207
           AWRK  DI+DVE FLE QR EER+G F  K D
Sbjct: 20  AWRK-TDIQDVEQFLEDQRQEERVGTFADKQD 50


>AE014298-1225|AAF46409.1|  478|Drosophila melanogaster CG1785-PA
           protein.
          Length = 478

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 21/32 (65%), Positives = 23/32 (71%)
 Frame = +1

Query: 112 AWRKHCDIKDVENFLEXQRLEERLGKFETKPD 207
           AWRK  DI+DVE FLE QR EER+G F  K D
Sbjct: 20  AWRK-TDIQDVEQFLEDQRQEERVGTFADKQD 50


>U42425-1|AAC46999.1|  711|Drosophila melanogaster DmMstProx
           protein.
          Length = 711

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 115 WRKHCDIKDVENFLEXQRLEERLGKFETKP 204
           W  HCD K + NF    +L  R+   E KP
Sbjct: 150 WTIHCDDKPLLNFFRHLKLIIRMKSAEMKP 179


>AF247769-1|AAF86229.1|  785|Drosophila melanogaster Toll-3 protein.
          Length = 785

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 115 WRKHCDIKDVENFLEXQRLEERLGKFETKP 204
           W  HCD K + NF    +L  R+   E KP
Sbjct: 224 WTIHCDDKPLLNFFRHLKLIIRMKSAEMKP 253


>AE014297-608|AAF54021.3|  965|Drosophila melanogaster CG1149-PA
           protein.
          Length = 965

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 115 WRKHCDIKDVENFLEXQRLEERLGKFETKP 204
           W  HCD K + NF    +L  R+   E KP
Sbjct: 402 WTIHCDDKPLLNFFRHLKLIIRMKSAEMKP 431


>AE013599-1927|AAF58226.1|  107|Drosophila melanogaster CG12862-PA,
           isoform A protein.
          Length = 107

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 159 FQEIFNVFNITVFPPRFFI 103
           ++EI+ +F++T  PPR FI
Sbjct: 43  YREIYEIFDVTSVPPRQFI 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,913,153
Number of Sequences: 53049
Number of extensions: 104299
Number of successful extensions: 100
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)