Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26m09
         (619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006679-8|AAK84470.1|  630|Caenorhabditis elegans Hypothetical ...    36   0.018
U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical pr...    27   8.1  
D49525-2|BAA08471.1|  567|Caenorhabditis elegans TPA-1B protein.       27   8.1  
D49525-1|BAA08470.1|  704|Caenorhabditis elegans TPA-1A protein.       27   8.1  
AF078781-3|AAC26917.1|  567|Caenorhabditis elegans Tpa (tetradec...    27   8.1  
AF078781-2|AAC26916.1|  704|Caenorhabditis elegans Tpa (tetradec...    27   8.1  

>AC006679-8|AAK84470.1|  630|Caenorhabditis elegans Hypothetical
           protein R13A5.9 protein.
          Length = 630

 Score = 36.3 bits (80), Expect = 0.018
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +3

Query: 222 YGATASLLPYLTIHMQSIGLTVPEISFVYLALPFTTFLSPPITGFLVDRFGEYKPVVITA 401
           + +  SL P L ++ + +G+T  +  F+  + P   FLS P       RF + K +++ +
Sbjct: 32  FASFGSLFPLLAVYFKQLGMTAAQAGFLIGSRPIVEFLSGPFWSQFASRFRKQKLLLLFS 91

Query: 402 L 404
           L
Sbjct: 92  L 92


>U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical
           protein ZC204.10 protein.
          Length = 238

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 152 REVHGLDAHQSELNYVKSDSFCDVRSYCFSS 244
           + V  L+ H   L+Y+ S +  D+  YCF S
Sbjct: 186 QNVRSLELHVVNLDYILSSNSSDILLYCFLS 216


>D49525-2|BAA08471.1|  567|Caenorhabditis elegans TPA-1B protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 119 GRVQRRGTRPHREVHGLDAHQSELNYVKSDSFCDVRS 229
           G  +RRG   H  VH +  HQ    + +   FC + S
Sbjct: 10  GIQRRRGAIKHARVHEIRGHQFVATFFRQPHFCSLCS 46


>D49525-1|BAA08470.1|  704|Caenorhabditis elegans TPA-1A protein.
          Length = 704

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 119 GRVQRRGTRPHREVHGLDAHQSELNYVKSDSFCDVRS 229
           G  +RRG   H  VH +  HQ    + +   FC + S
Sbjct: 147 GIQRRRGAIKHARVHEIRGHQFVATFFRQPHFCSLCS 183


>AF078781-3|AAC26917.1|  567|Caenorhabditis elegans Tpa
           (tetradecanoyl phorbol acetate)resistant protein 1,
           isoform b protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 119 GRVQRRGTRPHREVHGLDAHQSELNYVKSDSFCDVRS 229
           G  +RRG   H  VH +  HQ    + +   FC + S
Sbjct: 10  GIQRRRGAIKHARVHEIRGHQFVATFFRQPHFCSLCS 46


>AF078781-2|AAC26916.1|  704|Caenorhabditis elegans Tpa
           (tetradecanoyl phorbol acetate)resistant protein 1,
           isoform a protein.
          Length = 704

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 119 GRVQRRGTRPHREVHGLDAHQSELNYVKSDSFCDVRS 229
           G  +RRG   H  VH +  HQ    + +   FC + S
Sbjct: 147 GIQRRRGAIKHARVHEIRGHQFVATFFRQPHFCSLCS 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,384,698
Number of Sequences: 27780
Number of extensions: 282139
Number of successful extensions: 873
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)