BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26k23
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024288-1|AAH24288.1| 432|Homo sapiens solute carrier family 3... 36 0.041
AL139392-8|CAI20101.2| 432|Homo sapiens solute carrier family 3... 36 0.041
AL139392-7|CAI20100.2| 94|Homo sapiens solute carrier family 3... 36 0.041
AK075456-1|BAC11631.1| 432|Homo sapiens protein ( Homo sapiens ... 36 0.041
AB106538-1|BAC79117.1| 432|Homo sapiens adenosine 3'-phospho 5'... 36 0.041
AB097039-1|BAC77392.1| 392|Homo sapiens putative MAPK activatin... 36 0.041
AB097021-1|BAC77374.1| 392|Homo sapiens putative NFkB activatin... 36 0.041
>BC024288-1|AAH24288.1| 432|Homo sapiens solute carrier family 35,
member B2 protein.
Length = 432
Score = 36.3 bits (80), Expect = 0.041
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 323 WLFRLLLNVTGYSXILVPGFILYXYLXKIN 412
W FR ++N GY+ +VPG++L Y + N
Sbjct: 35 WFFRFVVNAAGYASFMVPGYLLVQYFRRKN 64
>AL139392-8|CAI20101.2| 432|Homo sapiens solute carrier family 35,
member B2 protein.
Length = 432
Score = 36.3 bits (80), Expect = 0.041
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 323 WLFRLLLNVTGYSXILVPGFILYXYLXKIN 412
W FR ++N GY+ +VPG++L Y + N
Sbjct: 35 WFFRFVVNAAGYASFMVPGYLLVQYFRRKN 64
>AL139392-7|CAI20100.2| 94|Homo sapiens solute carrier family 35,
member B2 protein.
Length = 94
Score = 36.3 bits (80), Expect = 0.041
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 323 WLFRLLLNVTGYSXILVPGFILYXYLXKIN 412
W FR ++N GY+ +VPG++L Y + N
Sbjct: 35 WFFRFVVNAAGYASFMVPGYLLVQYFRRKN 64
>AK075456-1|BAC11631.1| 432|Homo sapiens protein ( Homo sapiens
cDNA PSEC0149 fis, clone PLACE1007338, highly similar to
Solute carrier family 35, member B2. ).
Length = 432
Score = 36.3 bits (80), Expect = 0.041
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 323 WLFRLLLNVTGYSXILVPGFILYXYLXKIN 412
W FR ++N GY+ +VPG++L Y + N
Sbjct: 35 WFFRFVVNAAGYASFMVPGYLLVQYFRRKN 64
>AB106538-1|BAC79117.1| 432|Homo sapiens adenosine 3'-phospho
5'-phosphosulfate (PAPS) transporter protein.
Length = 432
Score = 36.3 bits (80), Expect = 0.041
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 323 WLFRLLLNVTGYSXILVPGFILYXYLXKIN 412
W FR ++N GY+ +VPG++L Y + N
Sbjct: 35 WFFRFVVNAAGYASFMVPGYLLVQYFRRKN 64
>AB097039-1|BAC77392.1| 392|Homo sapiens putative MAPK activating
protein protein.
Length = 392
Score = 36.3 bits (80), Expect = 0.041
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 323 WLFRLLLNVTGYSXILVPGFILYXYLXKIN 412
W FR ++N GY+ +VPG++L Y + N
Sbjct: 35 WFFRFVVNAAGYASFMVPGYLLVQYFRRKN 64
>AB097021-1|BAC77374.1| 392|Homo sapiens putative NFkB activating
protein protein.
Length = 392
Score = 36.3 bits (80), Expect = 0.041
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 323 WLFRLLLNVTGYSXILVPGFILYXYLXKIN 412
W FR ++N GY+ +VPG++L Y + N
Sbjct: 35 WFFRFVVNAAGYASFMVPGYLLVQYFRRKN 64
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,476,001
Number of Sequences: 237096
Number of extensions: 1114499
Number of successful extensions: 5453
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5453
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -