Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26k04
         (637 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030618-1|AAH30618.1|  589|Homo sapiens hypothetical protein LO...   157   3e-38
BC063561-1|AAH63561.1|  552|Homo sapiens hypothetical protein FL...   108   2e-23
AK026315-1|BAB15442.1|  506|Homo sapiens protein ( Homo sapiens ...   107   2e-23

>BC030618-1|AAH30618.1|  589|Homo sapiens hypothetical protein
           LOC196463 protein.
          Length = 589

 Score =  157 bits (381), Expect = 3e-38
 Identities = 80/215 (37%), Positives = 123/215 (57%), Gaps = 6/215 (2%)
 Frame = +1

Query: 10  DEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYC--FN-KTDVCALIEDYLDKNEDYIASMV 180
           D  QAY+AG +E  ++ +LI+MHW N +  YC  F  +   C  ++ +L+ N +++   +
Sbjct: 111 DSLQAYAAGVVEAAVSEELIYMHWMNTVVNYCGPFEYEVGYCERLKSFLEANLEWMQEEM 170

Query: 181 QEHYEDPYWYQIKLYYIQLEGLAAGYNDATKSMYEWLTVRDI--LWINMLGDLDDLAFAL 354
           + + + PYW+Q++L  +QL+GL   Y           T++ +  L + + GDL+DL  AL
Sbjct: 171 ESNPDSPYWHQVRLTLLQLKGLEDSYEGRVSFPAGKFTIKPLGFLLLQLSGDLEDLELAL 230

Query: 355 SMPRETPEGLMFGEHCSGLVKLLPDLSDLYTAQVTWNSYQSMLRIQKMYVMNYMTSP-GS 531
           +  +  P   +    CS L+KLLP  SDL  A  TWN+YQ MLR+ K Y + +   P G 
Sbjct: 231 NKTKIKPS--LGSGSCSALIKLLPGQSDLLVAHNTWNNYQHMLRVIKKYWLQFREGPWGD 288

Query: 532 GVLIPGRKMSLSSYPAFVQSTDDFYVMSSGLVAAE 636
             L+PG K+  SSYP  + S DDFY++ SGLV  E
Sbjct: 289 YPLVPGNKLVFSSYPGTIFSCDDFYILGSGLVTLE 323


>BC063561-1|AAH63561.1|  552|Homo sapiens hypothetical protein
           FLJ22662 protein.
          Length = 552

 Score =  108 bits (259), Expect = 2e-23
 Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 5/206 (2%)
 Frame = +1

Query: 25  YSAGFLEGFLTRDLIWMHWQNVLKGYCFNKTDVCALIEDYLDKNEDYIASMVQEHYEDPY 204
           + AGFLEG+LT   +  H+ N L      K  +   ++D+++K + +    ++E+  D +
Sbjct: 99  FVAGFLEGYLTAPHMNDHYTN-LYPQLITKPSIMDKVQDFMEKQDKWTRKNIKEYKTDSF 157

Query: 205 WYQIKLYYIQLEGLAAGYND-ATKSMYEWLTVRDILWINMLGDLDDLAFALSMPRETPEG 381
           W        Q++GL  G    A     + +T+  I ++N +GDL DL  +LS P +    
Sbjct: 158 WRHTGYVMAQIDGLYVGAKKRAILEGTKPMTLFQIQFLNSVGDLLDLIPSLS-PTKNGSL 216

Query: 382 LMFGE----HCSGLVKLLPDLSDLYTAQVTWNSYQSMLRIQKMYVMNYMTSPGSGVLIPG 549
            +F      HCS L+K+LP   ++  A  +W +Y +MLRI K +  N +    S      
Sbjct: 217 KVFKRWDMGHCSALIKVLPGFENILFAHSSWYTYAAMLRIYKHWDFNIIDKDTSS----- 271

Query: 550 RKMSLSSYPAFVQSTDDFYVMSSGLV 627
            ++S SSYP F++S DDFY++SSGL+
Sbjct: 272 SRLSFSSYPGFLESLDDFYILSSGLI 297


>AK026315-1|BAB15442.1|  506|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22662 fis, clone HSI08080. ).
          Length = 506

 Score =  107 bits (258), Expect = 2e-23
 Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 5/206 (2%)
 Frame = +1

Query: 25  YSAGFLEGFLTRDLIWMHWQNVLKGYCFNKTDVCALIEDYLDKNEDYIASMVQEHYEDPY 204
           + AGFLEG+LT   +  H+ N L      K  +   ++D+++K + +    ++E+  D +
Sbjct: 53  FVAGFLEGYLTAPHMNDHYTN-LYPQLITKPSIMDKVQDFMEKQDKWTRKNIKEYKTDSF 111

Query: 205 WYQIKLYYIQLEGLAAGYND-ATKSMYEWLTVRDILWINMLGDLDDLAFALSMPRETPEG 381
           W        Q++GL  G    A     + +T+  I ++N +GDL DL  +LS P +    
Sbjct: 112 WRHTGYVMAQIDGLYVGAKKRAILEGTKPMTLFQIQFLNSVGDLLDLIPSLS-PTKNGSL 170

Query: 382 LMFGE----HCSGLVKLLPDLSDLYTAQVTWNSYQSMLRIQKMYVMNYMTSPGSGVLIPG 549
            +F      HCS L+K+LP   ++  A  +W +Y +MLRI K +  N +    S      
Sbjct: 171 KVFKRWDMGHCSALIKVLPGFENVLFAHSSWYTYAAMLRIYKHWDFNIIDKDTSS----- 225

Query: 550 RKMSLSSYPAFVQSTDDFYVMSSGLV 627
            ++S SSYP F++S DDFY++SSGL+
Sbjct: 226 SRLSFSSYPGFLESLDDFYILSSGLI 251


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,642,460
Number of Sequences: 237096
Number of extensions: 1967965
Number of successful extensions: 5750
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5738
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)