Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26k04
(637 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57314-1|AAB49926.1| 624|Drosophila melanogaster LAMA protein. 93 4e-19
BT001475-1|AAN71230.1| 658|Drosophila melanogaster LD13253p pro... 92 7e-19
AE014296-945|AAN12118.2| 658|Drosophila melanogaster CG10645-PC... 92 7e-19
AE014296-944|AAF50787.3| 658|Drosophila melanogaster CG10645-PB... 92 7e-19
AE014296-943|AAG22333.2| 658|Drosophila melanogaster CG10645-PA... 92 7e-19
AF495541-1|AAM18063.1| 540|Drosophila melanogaster prolyl 4-hyd... 29 4.0
AE014298-3100|AAF50843.2| 348|Drosophila melanogaster CG32521-P... 29 5.3
>U57314-1|AAB49926.1| 624|Drosophila melanogaster LAMA protein.
Length = 624
Score = 92.7 bits (220), Expect = 4e-19
Identities = 69/226 (30%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Frame = +1
Query: 10 DEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYCFNKTDV---CALIEDYLDKNEDYIASMV 180
D QAY+AG LEG LT I+ W N + C C + D L N +
Sbjct: 67 DWVQAYAAGMLEGSLTWRNIYNQWSNTISSSCERDESTQKFCGWLRDLLTTNYHRLKRQT 126
Query: 181 QEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWLTVRDILWINMLGDLDDLAF 348
++ D YW+Q+ L+ QLEGL GY + A + E + D L +N D+ DL
Sbjct: 127 EKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEIPFSDFLLMNAAADIQDLKI 186
Query: 349 ------------ALSMPRETPEGLMFGEHCSGLVKLL-----PDLSDLYTAQVTWNSYQS 477
PR F + L K++ P + L T SY S
Sbjct: 187 YYENYELQNSTEHTEEPRTDQPKNFFLPSATMLTKIVQEEESPQVLQLLFGHSTAGSYSS 246
Query: 478 MLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSSYPAFVQSTDDFYVM 612
MLRIQK Y +Y +S +PG ++ + YP + STDDFY +
Sbjct: 247 MLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTDDFYTI 292
>BT001475-1|AAN71230.1| 658|Drosophila melanogaster LD13253p
protein.
Length = 658
Score = 91.9 bits (218), Expect = 7e-19
Identities = 71/226 (31%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Frame = +1
Query: 10 DEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYCFNKTDV---CALIEDYLDKNEDYIASMV 180
D QAY+AG LEG LT I+ W N + C C + D L N +
Sbjct: 101 DWVQAYAAGMLEGSLTWRNIYNQWSNTISSSCERDESTQKFCGWLRDLLTTNYHRLKRQT 160
Query: 181 QEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWLTVRDILWINMLGDLDDLA- 345
++ D YW+Q+ L+ QLEGL GY + A + E + D L +N D+ DL
Sbjct: 161 EKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEIPFSDFLLMNAAADIQDLKI 220
Query: 346 ----FALSMPRETPE--GL-----MFGEHCSGLVKLL-----PDLSDLYTAQVTWNSYQS 477
+ L E E G F + L K++ P + L T SY S
Sbjct: 221 YYENYELQNSTEHTEEPGTDQPKNFFLPSATMLTKIVQEEESPQVLQLLFGHSTAGSYSS 280
Query: 478 MLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSSYPAFVQSTDDFYVM 612
MLRIQK Y +Y +S +PG ++ + YP + STDDFY +
Sbjct: 281 MLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTDDFYTI 326
>AE014296-945|AAN12118.2| 658|Drosophila melanogaster CG10645-PC,
isoform C protein.
Length = 658
Score = 91.9 bits (218), Expect = 7e-19
Identities = 71/226 (31%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Frame = +1
Query: 10 DEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYCFNKTDV---CALIEDYLDKNEDYIASMV 180
D QAY+AG LEG LT I+ W N + C C + D L N +
Sbjct: 101 DWVQAYAAGMLEGSLTWRNIYNQWSNTISSSCERDESTQKFCGWLRDLLTTNYHRLKRQT 160
Query: 181 QEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWLTVRDILWINMLGDLDDLA- 345
++ D YW+Q+ L+ QLEGL GY + A + E + D L +N D+ DL
Sbjct: 161 EKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEIPFSDFLLMNAAADIQDLKI 220
Query: 346 ----FALSMPRETPE--GL-----MFGEHCSGLVKLL-----PDLSDLYTAQVTWNSYQS 477
+ L E E G F + L K++ P + L T SY S
Sbjct: 221 YYENYELQNSTEHTEEPGTDQPKNFFLPSATMLTKIVQEEESPQVLQLLFGHSTAGSYSS 280
Query: 478 MLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSSYPAFVQSTDDFYVM 612
MLRIQK Y +Y +S +PG ++ + YP + STDDFY +
Sbjct: 281 MLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTDDFYTI 326
>AE014296-944|AAF50787.3| 658|Drosophila melanogaster CG10645-PB,
isoform B protein.
Length = 658
Score = 91.9 bits (218), Expect = 7e-19
Identities = 71/226 (31%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Frame = +1
Query: 10 DEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYCFNKTDV---CALIEDYLDKNEDYIASMV 180
D QAY+AG LEG LT I+ W N + C C + D L N +
Sbjct: 101 DWVQAYAAGMLEGSLTWRNIYNQWSNTISSSCERDESTQKFCGWLRDLLTTNYHRLKRQT 160
Query: 181 QEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWLTVRDILWINMLGDLDDLA- 345
++ D YW+Q+ L+ QLEGL GY + A + E + D L +N D+ DL
Sbjct: 161 EKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEIPFSDFLLMNAAADIQDLKI 220
Query: 346 ----FALSMPRETPE--GL-----MFGEHCSGLVKLL-----PDLSDLYTAQVTWNSYQS 477
+ L E E G F + L K++ P + L T SY S
Sbjct: 221 YYENYELQNSTEHTEEPGTDQPKNFFLPSATMLTKIVQEEESPQVLQLLFGHSTAGSYSS 280
Query: 478 MLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSSYPAFVQSTDDFYVM 612
MLRIQK Y +Y +S +PG ++ + YP + STDDFY +
Sbjct: 281 MLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTDDFYTI 326
>AE014296-943|AAG22333.2| 658|Drosophila melanogaster CG10645-PA,
isoform A protein.
Length = 658
Score = 91.9 bits (218), Expect = 7e-19
Identities = 71/226 (31%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Frame = +1
Query: 10 DEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYCFNKTDV---CALIEDYLDKNEDYIASMV 180
D QAY+AG LEG LT I+ W N + C C + D L N +
Sbjct: 101 DWVQAYAAGMLEGSLTWRNIYNQWSNTISSSCERDESTQKFCGWLRDLLTTNYHRLKRQT 160
Query: 181 QEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWLTVRDILWINMLGDLDDLA- 345
++ D YW+Q+ L+ QLEGL GY + A + E + D L +N D+ DL
Sbjct: 161 EKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEIPFSDFLLMNAAADIQDLKI 220
Query: 346 ----FALSMPRETPE--GL-----MFGEHCSGLVKLL-----PDLSDLYTAQVTWNSYQS 477
+ L E E G F + L K++ P + L T SY S
Sbjct: 221 YYENYELQNSTEHTEEPGTDQPKNFFLPSATMLTKIVQEEESPQVLQLLFGHSTAGSYSS 280
Query: 478 MLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSSYPAFVQSTDDFYVM 612
MLRIQK Y +Y +S +PG ++ + YP + STDDFY +
Sbjct: 281 MLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTDDFYTI 326
>AF495541-1|AAM18063.1| 540|Drosophila melanogaster prolyl
4-hydroxylase alpha-relatedprotein PH4[alpha]SG1
protein.
Length = 540
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 472 QSMLRIQKMYVMNYMTSPGSGVLIPGRKMSLSS 570
+++LR+Q MY +N SGVL+PG K L++
Sbjct: 136 RALLRLQNMYQLN-TDHLASGVLLPGEKSPLAT 167
>AE014298-3100|AAF50843.2| 348|Drosophila melanogaster CG32521-PC,
isoform C protein.
Length = 348
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -3
Query: 455 TCAVYRSERSGSSFTSPEQCSPNIRPSGVSLGMDSAN---ARSSKSPSM 318
TC S +S +SP +P+ PSG SLG N A +S +P++
Sbjct: 62 TCKRRSGGGSSASNSSPNLAAPSANPSGSSLGQGPENNIFAPASSNPTL 110
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,278,147
Number of Sequences: 53049
Number of extensions: 555287
Number of successful extensions: 1645
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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