Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26j19
(691 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 2.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.7
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 23 2.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.7
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 23 3.6
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 6.3
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 6.3
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.4
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 496 TNMRPTVAGATSSSITISRSHL 431
T PT +T++S TIS+ H+
Sbjct: 382 TTASPTTEPSTTTSTTISQKHI 403
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 568 YSNYNKLHSTRIYNLNNHGGINSR 639
YSNYN ++ YN NN+ N +
Sbjct: 324 YSNYNNYNN---YNNNNYNNYNKK 344
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3
Query: 327 YCQLGKCISIG 359
YC+L KCI++G
Sbjct: 73 YCRLKKCIAVG 83
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3
Query: 327 YCQLGKCISIG 359
YC+L KCI++G
Sbjct: 122 YCRLKKCIAVG 132
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 344 MYQYWNNPKHPTALHQESPILQSSSPN 424
+YQ ++ H L+Q+SP L +P+
Sbjct: 69 IYQSHHHLHHHQVLYQQSPYLMYENPD 95
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 213 YAAFSLHNVSLVNT 172
Y+A S HN++ VNT
Sbjct: 264 YSAMSSHNLNYVNT 277
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 213 YAAFSLHNVSLVNT 172
Y+A S HN++ VNT
Sbjct: 265 YSALSSHNLNYVNT 278
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 568 YSNYNKLHSTRIYNLN 615
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 568 YSNYNKLHSTRIYNLN 615
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 568 YSNYNKLHSTRIYNLN 615
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 568 YSNYNKLHSTRIYNLN 615
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 568 YSNYNKLHSTRIYNLN 615
Y+NYN + YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 568 YSNYNKLHSTRIYNLN 615
Y+NYN + YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 568 YSNYNKLHSTRIYNLN 615
Y+NYN + YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 568 YSNYNKLHSTRIYNLN 615
Y+NYN + YN+N
Sbjct: 313 YNNYNNNYKPLYYNIN 328
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,069
Number of Sequences: 438
Number of extensions: 4610
Number of successful extensions: 32
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -