Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26j03
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 34 0.087
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 34 0.087
02_04_0366 - 22389591-22390527,22391296-22391429,22391762-223918... 30 1.9
01_06_1683 - 39134826-39135664,39136202-39136278,39136391-391364... 30 1.9
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 29 2.5
11_02_0063 + 7916048-7917135,7917225-7918690,7920177-7920238,792... 29 3.3
04_04_0155 - 23153314-23154204,23156887-23157104,23157284-231573... 29 3.3
03_02_1025 + 13289146-13289586,13291882-13292087,13292174-132923... 29 3.3
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179... 29 3.3
08_02_0464 - 17463066-17465136,17470821-17471650 27 9.9
06_01_0629 - 4582045-4582140,4582218-4582480,4582584-4582704,458... 27 9.9
05_05_0225 - 23437454-23437793,23438348-23440573,23440771-23441603 27 9.9
03_01_0359 - 2805094-2805175,2805256-2805347,2805443-2805517,280... 27 9.9
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Frame = +1
Query: 358 IPKSVEYLDKTLGPLT-------YLVGETLSVSDFAVFSVL--YVSSKFKEISKVIPSQN 510
+ +SV L+K LG YL G+ +S++D + FS + ++++++ + P +
Sbjct: 135 VDESVRKLEKVLGVYEARLSGSRYLAGDRISLADLSHFSNMRYFMATEYAGVVDAYP--H 192
Query: 511 IRRWMKLVEAQPQVQTAIKALPSD 582
++ W + + A+P VQ + +P D
Sbjct: 193 VKAWWEALLARPTVQKVMAGMPPD 216
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 34.3 bits (75), Expect = 0.087
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 301 LEKVTMNHWLSFSLIL--EDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLY-VSS 471
++ ++ WL ++ ++ E + +LD L T+LV LS++D V+S L
Sbjct: 74 IQAAYVDQWLDYAPVILSGSEFEAACSFLDGYLASRTFLVSYGLSIADIVVWSNLAGTGQ 133
Query: 472 KFKEISKVIPSQNIRRWMKLV 534
+++ + + QN+ RW +
Sbjct: 134 RWESLRRSKKYQNLVRWFNSI 154
>02_04_0366 -
22389591-22390527,22391296-22391429,22391762-22391816,
22392364-22393225,22393342-22393459,22393647-22393737,
22394627-22394670
Length = 746
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 295 SPLEKVTMNHWLSFSLILEDEIPKSVEYLDKTLGPLTYLVGE 420
+P++K WL LIL E+ + V + ++ +TYLVG+
Sbjct: 67 NPVDKSKTGGWLGAGLILGTELAERVCVMGISMNLVTYLVGD 108
>01_06_1683 -
39134826-39135664,39136202-39136278,39136391-39136441,
39136581-39136654,39136782-39136870,39137152-39137234,
39138067-39138241,39138348-39138501
Length = 513
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 313 TMNHWLSFSLILEDEIPKS 369
TMN+WL+FSL +D++P S
Sbjct: 3 TMNNWLAFSLSPQDQLPPS 21
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +1
Query: 352 DEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKVIPSQNIRRWMKL 531
+++ K +E + L TYL G LS D + F + S + +++ W
Sbjct: 141 EKLKKVLEVYEARLSQNTYLAGNFLSFVDLSHFPFTFYFMATPYASLLDKYPHVKAWWDG 200
Query: 532 VEAQPQVQ--TAIKALPSDA 585
+ A+P ++ TA LP A
Sbjct: 201 LAARPSIKKVTAAMVLPLKA 220
>11_02_0063 +
7916048-7917135,7917225-7918690,7920177-7920238,
7921808-7922407
Length = 1071
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 523 MKLVEAQPQVQTAIKALPSDALDKLTKVSSR 615
M ++EA PQ T+I L DA DKL K S +
Sbjct: 877 MLMLEADPQNATSIYNLHKDAKDKLNKSSMK 907
>04_04_0155 -
23153314-23154204,23156887-23157104,23157284-23157392,
23157507-23157509
Length = 406
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 295 SPLEKVTMNHWLSFSLILEDEIPKSVEYLDKTLGPLTYLVGE 420
+P++K WL LIL E+ + V + ++ +TYLVG+
Sbjct: 20 NPVDKDRTGGWLGAGLILGTELAERVCVVGISMNLVTYLVGD 61
>03_02_1025 +
13289146-13289586,13291882-13292087,13292174-13292323,
13292412-13292545,13292843-13292949,13293031-13293137,
13293581-13293686,13294098-13294217,13294318-13294474,
13295163-13295254,13295338-13295582,13295668-13296268,
13296362-13296457,13296541-13296794,13297622-13297715,
13299138-13299188
Length = 986
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 316 MNHWLSFSLILEDEIPKSVEYLDKTLGPLTYLVGETLSVSDF 441
+N WLSF+ I++D Y D T G L+Y TL V DF
Sbjct: 730 INDWLSFNKIIDDHF----RYTDPTSGYLSY----TLYVEDF 763
>01_03_0231 +
14014243-14014390,14015053-14015141,14017859-14017949,
14018088-14018215,14018703-14018784,14019022-14019081,
14019160-14019251,14019342-14019462,14019873-14019928,
14020193-14020272,14020774-14020820,14020940-14020989,
14021304-14021366,14021515-14021595,14021703-14021717,
14021875-14021985,14022072-14022147,14022350-14022492,
14022721-14022794,14023364-14023454,14023589-14023687
Length = 598
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 448 FSVLYVSSKFKEISKVI--PSQNIRRWMKLVEAQPQVQTAIKALPSDALDK 594
+SV+ FK++S+ I Q ++ +++VEA +++ AIK L D+ D+
Sbjct: 319 YSVIPHDFGFKKMSEFIIDTPQKLKAKLEMVEALSEIEIAIKLLEDDSSDQ 369
>08_02_0464 - 17463066-17465136,17470821-17471650
Length = 966
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 139 MAVEFYRSSAKEIDIVWENDSVIILPNSTKPVPFGTSNDLIRILENTFNKSVSPLEKVTM 318
M +E +S A+E EN II P+ P G L I N ++ ++P E ++
Sbjct: 503 MMLELMKSKARE-----ENFLTIIGPSPISTKPKGVVRRL-SIQYNDGDQKLAPQEVTSL 556
Query: 319 NHWLSFS 339
NH SFS
Sbjct: 557 NHVRSFS 563
>06_01_0629 -
4582045-4582140,4582218-4582480,4582584-4582704,
4582833-4583171,4583208-4583245,4583355-4583670,
4583753-4584006,4586417-4586546
Length = 518
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 295 SPLEKVTMNHWLSFSLILE-DEIPKSVEYLDKTLGPLTYL 411
SPL K+ +++ SFS IL SV YLD+ L Y+
Sbjct: 239 SPLSKIVVSYTASFSSILTVKRFKPSVTYLDQLLNNGDYV 278
>05_05_0225 - 23437454-23437793,23438348-23440573,23440771-23441603
Length = 1132
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 328 LSFSLILEDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSS 471
L++S I D + +++YL LG L L TLS + + L++ S
Sbjct: 703 LTYSAIHSDNLKNNMQYLGSILGKLPNLKSITLSPVGSSYANTLHIHS 750
>03_01_0359 -
2805094-2805175,2805256-2805347,2805443-2805517,
2805582-2805675,2805769-2805872,2806777-2806885,
2807397-2807609,2808170-2808289,2809060-2809115,
2809210-2809287,2809374-2809733
Length = 460
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 328 LSFSLILEDEIPKSVEYLDKTLGPLTYLVGETLSVSDF 441
L+ L ++ E+ K V Y+D+ + Y+ E L++ DF
Sbjct: 394 LALQLFVDGEVWKKVIYVDRLVQLFRYVPREQLTIPDF 431
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,906,735
Number of Sequences: 37544
Number of extensions: 329529
Number of successful extensions: 851
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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