Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26i20
         (237 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   2.0  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   2.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   2.0  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   2.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   2.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   3.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   3.6  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   4.7  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
          channel variant 4 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 6  VFTIICALNMIVKNITL 56
          +FTI+C L + +  +TL
Sbjct: 32 IFTILCILTLALTLVTL 48


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
          channel variant 3 protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 6  VFTIICALNMIVKNITL 56
          +FTI+C L + +  +TL
Sbjct: 32 IFTILCILTLALTLVTL 48


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
          channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 6  VFTIICALNMIVKNITL 56
          +FTI+C L + +  +TL
Sbjct: 32 IFTILCILTLALTLVTL 48


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
          channel protein.
          Length = 458

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 6  VFTIICALNMIVKNITL 56
          +FTI+C L + +  +TL
Sbjct: 32 IFTILCILTLALTLVTL 48


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 70  YTFNFNVIFLTIIFKAHIIVN 8
           Y  N  +IFL I FK+  ++N
Sbjct: 128 YGGNSTIIFLLIRFKSFSLLN 148


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 143 SHRLHFGKS**RLTGKQQAYVL 78
           +H L FGK   + +GK + Y++
Sbjct: 180 NHALIFGKLDTKTSGKYKEYII 201


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 143 SHRLHFGKS**RLTGKQQAYVL 78
           +H L FGK   + +GK + Y++
Sbjct: 180 NHALIFGKLDTKTSGKYKEYII 201


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 104 TGKQQAYVLYLLYI 63
           +GKQQ Y L+ + I
Sbjct: 5   SGKQQVYQLFFIQI 18


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,807
Number of Sequences: 438
Number of extensions: 1088
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3898467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)