Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26h11
(247 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate de... 93 2e-19
AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein. 93 2e-19
AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate d... 93 2e-19
BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein. 33 0.17
BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear f... 33 0.17
BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear f... 33 0.17
BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA 3... 33 0.17
AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear f... 33 0.17
AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear f... 33 0.17
AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate de... 33 0.17
BC101805-1|AAI01806.1| 811|Homo sapiens protocadherin gamma sub... 31 0.68
AF152518-1|AAD43778.1| 811|Homo sapiens protocadherin gamma B2 ... 31 0.68
AF152331-1|AAD43725.1| 931|Homo sapiens protocadherin gamma B2 ... 31 0.68
M58597-1|AAA63173.1| 530|Homo sapiens ELAM-1 ligand fucosyltran... 30 1.6
M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein. 29 2.7
J05211-1|AAA35766.1| 1752|Homo sapiens protein ( Human desmoplak... 29 2.7
AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein. 29 2.7
AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein pro... 29 2.7
AY358867-1|AAQ89226.1| 352|Homo sapiens tryptophan/serine prote... 29 3.6
BC105005-1|AAI05006.1| 773|Homo sapiens diacylglycerol kinase, ... 28 6.3
BC053850-1|AAH53850.1| 403|Homo sapiens forkhead box Q1 protein. 28 6.3
AL499606-1|CAH70503.1| 403|Homo sapiens forkhead box Q1 protein. 28 6.3
AF225950-1|AAK00639.1| 403|Homo sapiens HNF-3/forkhead-like pro... 28 6.3
AF153341-1|AAF75586.1| 402|Homo sapiens winged helix/forkhead t... 28 6.3
AB018261-1|BAA34438.1| 742|Homo sapiens KIAA0718 protein protein. 28 6.3
>BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = +1
Query: 1 WSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYR 180
WS++ Y PVPG++ PS+ NY GGF LM KDL LA A +SPI LG++A Q+YR
Sbjct: 252 WSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYR 311
Query: 181 IVQSRGYGQKDFSFVFQLLKKK 246
++ ++GY +KDFS VFQ L+++
Sbjct: 312 MMCAKGYSKKDFSSVFQFLREE 333
>AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein.
Length = 336
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = +1
Query: 1 WSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYR 180
WS++ Y PVPG++ PS+ NY GGF LM KDL LA A +SPI LG++A Q+YR
Sbjct: 252 WSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYR 311
Query: 181 IVQSRGYGQKDFSFVFQLLKKK 246
++ ++GY +KDFS VFQ L+++
Sbjct: 312 MMCAKGYSKKDFSSVFQFLREE 333
>AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = +1
Query: 1 WSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYR 180
WS++ Y PVPG++ PS+ NY GGF LM KDL LA A +SPI LG++A Q+YR
Sbjct: 252 WSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYR 311
Query: 181 IVQSRGYGQKDFSFVFQLLKKK 246
++ ++GY +KDFS VFQ L+++
Sbjct: 312 MMCAKGYSKKDFSSVFQFLREE 333
>BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein.
Length = 484
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 61 NYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 231
N+ F + + KDL LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 424 NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 480
>BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 61 NYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 231
N+ F + + KDL LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 493 NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 61 NYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 231
N+ F + + KDL LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 493 NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA
3930401K13 gene protein.
Length = 523
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 61 NYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 231
N+ F + + KDL LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 463 NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 519
>AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac-like protein protein.
Length = 553
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 61 NYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 231
N+ F + + KDL LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 493 NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 547
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 61 NYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 231
N+ F + + KDL LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 487 NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 543
>AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase-like protein HIBDL protein.
Length = 553
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 61 NYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 231
N+ F + + KDL LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 493 NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>BC101805-1|AAI01806.1| 811|Homo sapiens protocadherin gamma
subfamily B, 2 protein.
Length = 811
Score = 31.1 bits (67), Expect = 0.68
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 210 FLAVAPGLHDAVELSCDSAQWDRRTN 133
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>AF152518-1|AAD43778.1| 811|Homo sapiens protocadherin gamma B2
short form protein protein.
Length = 811
Score = 31.1 bits (67), Expect = 0.68
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 210 FLAVAPGLHDAVELSCDSAQWDRRTN 133
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>AF152331-1|AAD43725.1| 931|Homo sapiens protocadherin gamma B2
protein.
Length = 931
Score = 31.1 bits (67), Expect = 0.68
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 210 FLAVAPGLHDAVELSCDSAQWDRRTN 133
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>M58597-1|AAA63173.1| 530|Homo sapiens ELAM-1 ligand
fucosyltransferase protein.
Length = 530
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 232 AGRRTRSLSGRSPWTARCGRAELRQRPMGSANEYPTPCH 116
+GR+ R++ G + W A A R +G A + P P H
Sbjct: 40 SGRKGRAVPGWASWPAHLALAARPARHLGGAGQGPRPLH 78
>M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.
Length = 2871
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 169 ELRQRPMGSANEYPTPCHWLI 107
+LRQRP GS E T C W +
Sbjct: 1941 KLRQRPYGSHRETQTECEWTV 1961
>J05211-1|AAA35766.1| 1752|Homo sapiens protein ( Human desmoplakin
mRNA, 3' end. ).
Length = 1752
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 169 ELRQRPMGSANEYPTPCHWLI 107
+LRQRP GS E T C W +
Sbjct: 822 KLRQRPYGSHRETQTECEWTV 842
>AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.
Length = 2871
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 169 ELRQRPMGSANEYPTPCHWLI 107
+LRQRP GS E T C W +
Sbjct: 1941 KLRQRPYGSHRETQTECEWTV 1961
>AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein protein.
Length = 2319
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 169 ELRQRPMGSANEYPTPCHWLI 107
+LRQRP GS E T C W +
Sbjct: 1389 KLRQRPYGSHRETQTECEWTV 1409
>AY358867-1|AAQ89226.1| 352|Homo sapiens tryptophan/serine protease
protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = -1
Query: 223 RTRSLSGRSPWTARCGRAELRQRPMGS----ANEYPTPCHWLILSP 98
+ L GR P+ A R ++Q+PMGS E +P WL+L P
Sbjct: 297 KVTQLEGR-PFNAEKRRTSVKQKPMGSPVSGVPEPGSPRSWLLLCP 341
>BC105005-1|AAI05006.1| 773|Homo sapiens diacylglycerol kinase,
beta 90kDa protein.
Length = 773
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 216 EVFLAVAPGLHDAVELSCDSAQWD 145
E F A LH++VE+ CD Q D
Sbjct: 627 ETFSATCKKLHESVEIECDGVQID 650
>BC053850-1|AAH53850.1| 403|Homo sapiens forkhead box Q1 protein.
Length = 403
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +3
Query: 132 YSFADPIGRCRNSALPHRA---VQGLRPE 209
Y+FAD + R R L HRA GLRPE
Sbjct: 202 YTFADGVFRRRRKRLSHRAPVPAPGLRPE 230
>AL499606-1|CAH70503.1| 403|Homo sapiens forkhead box Q1 protein.
Length = 403
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +3
Query: 132 YSFADPIGRCRNSALPHRA---VQGLRPE 209
Y+FAD + R R L HRA GLRPE
Sbjct: 202 YTFADGVFRRRRKRLSHRAPVPAPGLRPE 230
>AF225950-1|AAK00639.1| 403|Homo sapiens HNF-3/forkhead-like
protein 1 protein.
Length = 403
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +3
Query: 132 YSFADPIGRCRNSALPHRA---VQGLRPE 209
Y+FAD + R R L HRA GLRPE
Sbjct: 202 YTFADGVFRRRRKRLSHRAPVPAPGLRPE 230
>AF153341-1|AAF75586.1| 402|Homo sapiens winged helix/forkhead
transcription factor protein.
Length = 402
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +3
Query: 132 YSFADPIGRCRNSALPHRA---VQGLRPE 209
Y+FAD + R R L HRA GLRPE
Sbjct: 201 YTFADGVFRRRRKRLSHRAPVPAPGLRPE 229
>AB018261-1|BAA34438.1| 742|Homo sapiens KIAA0718 protein protein.
Length = 742
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 216 EVFLAVAPGLHDAVELSCDSAQWD 145
E F A LH++VE+ CD Q D
Sbjct: 565 ETFSATCKKLHESVEIECDGVQID 588
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,542,354
Number of Sequences: 237096
Number of extensions: 810848
Number of successful extensions: 2289
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 76,859,062
effective HSP length: 59
effective length of database: 62,870,398
effective search space used: 1383148756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -