Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26h05
         (612 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-li...   230   3e-60
BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse) pr...   186   4e-47
AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens ...   186   4e-47
U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog pro...    30   7.4  
AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking r...    30   7.4  
AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking r...    30   7.4  

>BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-like
           protein.
          Length = 337

 Score =  230 bits (562), Expect = 3e-60
 Identities = 110/150 (73%), Positives = 123/150 (82%)
 Frame = +3

Query: 162 VNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQNCPTK 341
           VNVVEALQEFWQ+K           LV+YE VP+  PPYVCYVTLPGG+CFGSFQ CPTK
Sbjct: 98  VNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTK 157

Query: 342 AEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHQDPSAGIAAFR 521
           AEARRSAAKIALMNSVFNEH SRRI+D FIEK+V+EA ASF G+      +P+ GI AFR
Sbjct: 158 AEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEA-DNPNTGIGAFR 216

Query: 522 FMLEANKGRTMLEFQELMTVFQLLHWNGSL 611
           FMLE+NKG++MLEFQELMTVFQLLHWNGSL
Sbjct: 217 FMLESNKGKSMLEFQELMTVFQLLHWNGSL 246


>BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse)
           protein.
          Length = 282

 Score =  186 bits (454), Expect = 4e-47
 Identities = 89/154 (57%), Positives = 113/154 (73%)
 Frame = +3

Query: 150 VLSTVNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQN 329
           V   +NVV  LQEFW+ K           +V+YES+PA  PP+V YVTLPGG+CFG+FQ 
Sbjct: 24  VFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQC 83

Query: 330 CPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHQDPSAGI 509
           C ++AEARR AAK+AL+NS+FNE  SRRI+  FI ++V EA AS +G T +   DPS  +
Sbjct: 84  CLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSV 142

Query: 510 AAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSL 611
            A+ +MLE+N G+TMLEFQELMT+FQLLHWNGSL
Sbjct: 143 GAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSL 176


>AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25534 fis, clone CBR08513. ).
          Length = 282

 Score =  186 bits (454), Expect = 4e-47
 Identities = 89/154 (57%), Positives = 113/154 (73%)
 Frame = +3

Query: 150 VLSTVNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQN 329
           V   +NVV  LQEFW+ K           +V+YES+PA  PP+V YVTLPGG+CFG+FQ 
Sbjct: 24  VFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQC 83

Query: 330 CPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHQDPSAGI 509
           C ++AEARR AAK+AL+NS+FNE  SRRI+  FI ++V EA AS +G T +   DPS  +
Sbjct: 84  CLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSV 142

Query: 510 AAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSL 611
            A+ +MLE+N G+TMLEFQELMT+FQLLHWNGSL
Sbjct: 143 GAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSL 176


>U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 246  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 344
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


>AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking
            regulator protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 246  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 344
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


>AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking
            regulator protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 246  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 344
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,729,041
Number of Sequences: 237096
Number of extensions: 1324309
Number of successful extensions: 3679
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3676
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)