Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26g22
(536 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 38 7e-04
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 38 0.001
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 38 0.001
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 37 0.002
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 37 0.002
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 36 0.004
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 36 0.005
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 35 0.007
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 34 0.015
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 33 0.020
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 30 0.25
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 28 1.0
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 28 1.0
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 26 3.1
SPAC328.05 |||RNA-binding protein involved in export of mRNAs|Sc... 26 3.1
SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces... 26 4.1
SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase Tpp1|Schi... 26 4.1
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 26 4.1
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 4.1
SPCC16C4.05 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 25 5.4
SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces po... 25 7.2
SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|c... 25 7.2
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 25 7.2
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.2
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 9.5
SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces po... 25 9.5
SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces... 25 9.5
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 38.3 bits (85), Expect = 7e-04
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 232 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPIL-ILVARFLAGISGGGLLVMAPIF 408
I G L + GRK I + ++ +IV++++ + ++V RF+ G G ++ P++
Sbjct: 146 IAGALADFFGRKPV-IAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLY 204
Query: 409 ISXIADDSIRGALASSPLFLYCVGVLLSY 495
+S IA IRG L + L G +++Y
Sbjct: 205 LSEIAPSKIRGRLVIIYVLLITAGQVIAY 233
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 37.5 bits (83), Expect = 0.001
Identities = 22/92 (23%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +1
Query: 232 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 405
++ L++ +G++ + T+ ++ I+++++ P + I+VA+ G+S G L V+AP
Sbjct: 75 LSSPLMDRIGKRTSIMFWTIVYLIG-IILQVTAVPSWVQIMVAKIWTGLSIGALSVLAPG 133
Query: 406 FISXIADDSIRGALASSPLFLYCVGVLLSYII 501
F S +A +RG + ++ G+ ++ I
Sbjct: 134 FQSEVAPADLRGTIVTTYQLAVTGGIFIAACI 165
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 37.5 bits (83), Expect = 0.001
Identities = 23/92 (25%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +1
Query: 232 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 405
++ + + +G++ IV T ++ I+++++ P + ILVA+ G+S G L V+ P
Sbjct: 43 LSSPVADKIGKRLSIIVWTTVYLIG-IIIQVTTVPSWVQILVAKIWTGLSIGALSVITPG 101
Query: 406 FISXIADDSIRGALASSPLFLYCVGVLLSYII 501
+ S +A +RGA+ ++ +G+ ++ I
Sbjct: 102 YQSEVAPAIMRGAIVTTYQLFITLGIFIAACI 133
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 238 GTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISX 417
G N LGRK + F +L + S + I ++V R + G+ GGG++ + I IS
Sbjct: 152 GVFCNILGRKIVLYICIFFFMLGSALCGASQNMIWLIVCRAIQGLGGGGIISLVNIIISD 211
Query: 418 I 420
I
Sbjct: 212 I 212
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 36.7 bits (81), Expect = 0.002
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Frame = +1
Query: 232 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 405
I+ + +G++N I + ++ I+++++ P + I+VA+ G+ G L V+AP
Sbjct: 75 ISSPTTDRIGKRNSIIGFCVIYLIG-VIIQVTAVPSWVQIMVAKIWTGLGIGALSVLAPG 133
Query: 406 FISXIADDSIRGALASSPLFLYCVGVLLSYII--GWFSTYHVIIW 534
+ S +A IRG + + G+ ++ I G Y W
Sbjct: 134 YQSEVAPPHIRGTIVVTYQLCVTAGIFIAACINMGTHKLYKTAQW 178
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 35.9 bits (79), Expect = 0.004
Identities = 22/87 (25%), Positives = 43/87 (49%)
Frame = +1
Query: 235 TGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFIS 414
+G L + +GRK + V+ I+ S + +++V RF+ G G ++ P++I+
Sbjct: 140 SGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYIT 199
Query: 415 XIADDSIRGALASSPLFLYCVGVLLSY 495
+A +RG L + G L++Y
Sbjct: 200 ELAPARLRGRLVIIYVVFITGGQLIAY 226
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 35.5 bits (78), Expect = 0.005
Identities = 21/92 (22%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +1
Query: 232 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 405
++ L++ +G++ + T+ ++ I+++++ P + I+VA+ G++ G L V+AP
Sbjct: 75 LSSPLMDRIGKRVSIMFWTIVYLIG-IILQVTAVPSWVQIMVAKIWTGLAIGALSVLAPG 133
Query: 406 FISXIADDSIRGALASSPLFLYCVGVLLSYII 501
F S +A ++RG + ++ G+ ++ I
Sbjct: 134 FQSEVAPATLRGTIVTTYQLAVTGGIFIAACI 165
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 35.1 bits (77), Expect = 0.007
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +1
Query: 313 IVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASS 456
+V S I +LV + LAG+ G L V++P + S +A IRGA+ ++
Sbjct: 103 LVTAVPSWIQVLVGKILAGVGIGALSVLSPGYQSEVAPPQIRGAVVAT 150
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 33.9 bits (74), Expect = 0.015
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 301 LSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYC 474
++ IV+L++ P + ++VA+ G+ G L V+AP + S + IRGA+ ++
Sbjct: 97 ITGVIVQLTTIPSWVQMMVAKIWTGLGIGALSVIAPGYQSESSPPHIRGAIVTTYQLFIT 156
Query: 475 VGVLLSYII 501
+G+ ++ I
Sbjct: 157 LGIFIAACI 165
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 33.5 bits (73), Expect = 0.020
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 313 IVELSSSP--ILILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYCVGVL 486
IV++++ P + I+VA+ GI G L V+AP + S A SIRG + + G+
Sbjct: 105 IVQVTAVPSWVQIMVAKIWTGIGIGALSVLAPGYQSETAPPSIRGTVVVTYQLFVTGGIF 164
Query: 487 LSYII 501
++ I
Sbjct: 165 IAACI 169
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 29.9 bits (64), Expect = 0.25
Identities = 26/89 (29%), Positives = 37/89 (41%)
Frame = +1
Query: 238 GTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISX 417
G L + GR+ + L +S S + +AR LAGI GGGL M+ I S
Sbjct: 87 GRLSDIFGRRPTVVFANAAFTLGTFWCGISRSLPELCMARALAGIGGGGLGTMSSIISSD 146
Query: 418 IADDSIRGALASSPLFLYCVGVLLSYIIG 504
I RG ++ +G L +G
Sbjct: 147 IVSLRERGTWQGITNIVWGIGGSLGGPLG 175
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 343 ILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYCVGVLLSYIIGWF 510
++ AR +AGI GGG+ I +S I RG + +G L +G +
Sbjct: 180 LVAARAIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVFFAIGSSLGGPVGGY 235
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 27.9 bits (59), Expect = 1.0
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 271 GGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIRG--- 441
G ++ +FN+ L+ + + + RFLAG + + IS + RG
Sbjct: 118 GNVIFIVFNMACG----LARTKAQMYIFRFLAGFGSATPMGLGSGTISDLFTPDERGKAV 173
Query: 442 -ALASSPLFLYCVGVLLSYIIGWFSTYHVIIW 534
++ +PL +G ++S I ++TY I W
Sbjct: 174 AVMSLAPLLGPTIGPVVSGFIAEYTTYKWIFW 205
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 407 NIGAITSKPPPEIPARNLATRISIGDELSSTMVHDKTLNR 288
N G + +P P P N+ TRI I + S + + +NR
Sbjct: 631 NSGQSSGRPGPLSPNLNVTTRIDIKGKKGSMHLQPRDVNR 670
>SPAC328.05 |||RNA-binding protein involved in export of
mRNAs|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 26.2 bits (55), Expect = 3.1
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -1
Query: 314 MVHDKTLNRVKTIPPF---FLPRLLISVPVMAVPSIAPNDGRLPRRD 183
++H T N T F FL L IS+PV +P+IAP LP +
Sbjct: 380 VMHIPTTNSPLTPQSFTNSFLGYLPISMPVANMPAIAPISVALPENN 426
>SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 662
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 195 AQERRVSFTEWRRQR-GQXGLEELRRVRRPDVGEAHQK*TVATRKRSEHLIQFSFHFHQQ 19
A R++ F++ + R G+ LR++ +V + T+A K EH+I + HQ+
Sbjct: 601 ASPRKLIFSDLPKTRSGKIMRRILRKILAGEVDQIGDLSTLADPKVVEHIIHAVHYAHQK 660
Query: 18 K 16
K
Sbjct: 661 K 661
>SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase
Tpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 288 SVQCFIMDHSGTKFITDTDPGCEVPSRNL 374
S + F+MD+ GT DP VPS+ L
Sbjct: 563 SKRLFMMDYDGTLTPIVRDPNAAVPSKKL 591
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 4.1
Identities = 23/88 (26%), Positives = 34/88 (38%)
Frame = +1
Query: 259 GRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIR 438
GRK G +V ++L S S I+ RF AG+ G +V + ++ + + R
Sbjct: 120 GRKIGVLVPFFLSILFTIGTASSDSVAAIMCTRFFAGLFAGAPVVSSGGVMADLWCPAQR 179
Query: 439 GALASSPLFLYCVGVLLSYIIGWFSTYH 522
G F G II T H
Sbjct: 180 GTALIFYAFFVVSGADFGPIISSLVTEH 207
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 264 KKWWNRFNSVQCFIMDHSGTKFITDTDPG 350
K W R S F +H ++ + +DPG
Sbjct: 228 KNWKTRIYSFSVFFPEHMDSRVLVQSDPG 256
>SPCC16C4.05 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 201
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 367 RLGTSQPGSVSVMNLVPLWSMIK 299
+LG S+ G+++V + PLW +K
Sbjct: 127 KLGLSRAGAIAVQDDSPLWKYLK 149
>SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 161
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 280 VLTLFNVLSWTIVELSSSPILILVARFL---AGISGGGLLVMAPIFISXIADDSIRGALA 450
++ ++ ++ ++ + IL L + F+ AG+S G + A I + D +RG
Sbjct: 63 IIAIYGLVVSVLISGNLKQILSLYSGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQ 122
Query: 451 SSPLFLYCVGVLL 489
LF+ + +L+
Sbjct: 123 QPRLFVAMILILI 135
>SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 244 LINSLGRKNGGIVLTLFNVLSWTIVELSSSPIL 342
++ ++G+ G+VL LF V W I +S +L
Sbjct: 2 VLQAIGKHALGVVLLLFVVFLWLISSFLTSSLL 34
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 374 EIPARNLATRISIGDELSSTMVHDKTLNRVKTIPPFF 264
EI A + IS+ +E M H+K + V T+PP F
Sbjct: 139 EIIAMTMEHYISLAEE----MAHEKITDLVLTVPPHF 171
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 359 NLATRISIGDELSSTMVHDKTLNRVKTIP 273
N + I ELS+ M D TLN VK P
Sbjct: 29 NSIKALPIQSELSAMMSKDNTLNHVKQEP 57
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 81 FTFDGLHQRLAFVHDGALQVRXDPAVGAIQ*NSRV 185
+ +D LHQ GA V DP G+I N+ +
Sbjct: 832 YWWDVLHQSFGVKLTGATSVASDPLKGSISKNASI 866
>SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 451
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 177 SRVSPGQSTVVGSDARNSHNRNADQQSGQKKW 272
++ SP + V+ +S+NR Q + Q KW
Sbjct: 212 TKSSPVHNEVMAEPLPHSNNREVTQATNQPKW 243
>SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 282 FNSVQCFIMDHSGTKFI--TDTDPGCEVPSRNLRW 380
++++ F +D+ F DTDP ++PS L W
Sbjct: 270 YDAIGLFSLDYQSQWFSGWDDTDPNPKIPSLGLVW 304
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,310,715
Number of Sequences: 5004
Number of extensions: 48006
Number of successful extensions: 156
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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