Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26g09
         (639 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113189-1|AAM77920.1|  755|Homo sapiens OCT-1 protein protein.        30   6.0  
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    30   8.0  
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.             30   8.0  

>AY113189-1|AAM77920.1|  755|Homo sapiens OCT-1 protein protein.
          Length = 755

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 206 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAA-T 30
           +TS A+  +  +  S TT+   AT++      SS +TS +L+P   +  S +  + A+ T
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 555

Query: 29  IVLEPTDT 6
             ++ T T
Sbjct: 556 STIQTTST 563


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
             marker CA125 protein.
          Length = 22152

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -2

Query: 185   PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 15
             PV  +  SF+ ++  AT V+     T+ SS + +       + +TS  T++GAAT    P
Sbjct: 11702 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 11761

Query: 14    TDT 6
             T T
Sbjct: 11762 TLT 11764


>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
          Length = 6995

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -2

Query: 185  PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 15
            PV  +  SF+ ++  AT V+     T+ SS + +       + +TS  T++GAAT    P
Sbjct: 3406 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 3465

Query: 14   TDT 6
            T T
Sbjct: 3466 TLT 3468


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,445,682
Number of Sequences: 237096
Number of extensions: 1161336
Number of successful extensions: 2591
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2573
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)