Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26f23
(619 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 290 7e-79
04_01_0103 + 1082077-1082167,1083037-1085477 281 2e-76
02_04_0017 + 18937774-18937864,18938505-18940945 281 3e-76
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 250 7e-67
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 192 2e-49
03_05_0511 + 25056018-25059107 113 1e-25
02_04_0148 - 20198407-20201424 107 9e-24
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 64 6e-11
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 55 5e-08
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 32 0.42
06_01_0244 - 1844161-1844241,1844356-1844394,1844510-1844617,184... 30 1.7
07_03_0896 + 22373348-22374946 29 3.0
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 29 3.9
10_08_0081 + 14710478-14710822 28 5.2
04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376 28 5.2
10_08_0621 + 19328357-19329545,19329967-19329986 28 6.8
07_01_0244 + 1786009-1788048 28 6.8
02_02_0340 + 9135846-9138377 28 6.8
11_06_0282 - 21884702-21885085 27 9.0
09_02_0302 - 7086017-7086124,7086125-7086796,7087511-7088070,708... 27 9.0
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793... 27 9.0
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 27 9.0
02_03_0145 - 15715181-15715834,15716049-15716271,15717318-15718777 27 9.0
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 290 bits (711), Expect = 7e-79
Identities = 144/209 (68%), Positives = 168/209 (80%), Gaps = 3/209 (1%)
Frame = +1
Query: 1 KTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 174
K T+T K +A +K MKFSVSPVVRVAV+ K +DLPKLVEGLKRLAKSDPMV C
Sbjct: 459 KNATLTNEKEVDACPIKAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTV 518
Query: 175 EESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 351
EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPN
Sbjct: 519 EESGEHIIAGAGELHLEICLKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKSPN 578
Query: 352 KHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGT 531
KHNRL+M+A+PM +GLPE IDEGR+ PRDD K R++ L+E++ +D A+KIWCFGPE T
Sbjct: 579 KHNRLYMEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETT 638
Query: 532 GPNILVDCSKGVQYLNEIKDSVVAGFQWA 618
GPNI+VD KGVQYLNEIKDSVVAGFQWA
Sbjct: 639 GPNIVVDMCKGVQYLNEIKDSVVAGFQWA 667
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 281 bits (690), Expect = 2e-76
Identities = 139/209 (66%), Positives = 166/209 (79%), Gaps = 3/209 (1%)
Frame = +1
Query: 1 KTGTITTFKNAHN--MKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 174
K T+T K A ++ MKFSVSPVVRVAV+ K +DLPKLVEGLKRLAKSDPMV C
Sbjct: 463 KNATLTNEKEADACPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTI 522
Query: 175 EESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 351
EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPN
Sbjct: 523 EESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPN 582
Query: 352 KHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGT 531
KHNRL+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D A+KIWCFGPE T
Sbjct: 583 KHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETT 642
Query: 532 GPNILVDCSKGVQYLNEIKDSVVAGFQWA 618
GPN++VD KGVQYLNEIKDSVVAGFQWA
Sbjct: 643 GPNMVVDMCKGVQYLNEIKDSVVAGFQWA 671
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 281 bits (689), Expect = 3e-76
Identities = 139/209 (66%), Positives = 167/209 (79%), Gaps = 3/209 (1%)
Frame = +1
Query: 1 KTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 174
K T+T K +A ++ MKFSVSPVVRVAV+ K +DLPKLVEGLKRLAKSDPMV C
Sbjct: 463 KNATLTNEKESDACPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTI 522
Query: 175 EESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 351
EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPN
Sbjct: 523 EESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPN 582
Query: 352 KHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGT 531
KHNRL+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D A+KIWCFGPE T
Sbjct: 583 KHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETT 642
Query: 532 GPNILVDCSKGVQYLNEIKDSVVAGFQWA 618
GPN++VD KGVQYLNEIKDSVVAGFQWA
Sbjct: 643 GPNMVVDMCKGVQYLNEIKDSVVAGFQWA 671
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 250 bits (612), Expect = 7e-67
Identities = 125/217 (57%), Positives = 160/217 (73%), Gaps = 11/217 (5%)
Frame = +1
Query: 1 KTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 174
K T+T K +AH +K MKFSVSPVVR +V KN ++LPKLVEGLKRLAKSDP+V C
Sbjct: 465 KNATLTDEKAVDAHPIKAMKFSVSPVVRKSVACKNASELPKLVEGLKRLAKSDPLVVCTI 524
Query: 175 EESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 351
EESGEH++AG G+LHLEIC+KDL+ED I P+++YRETV + S + +SKSPN
Sbjct: 525 EESGEHVIAGVGQLHLEICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKSPN 584
Query: 352 KHNRLFMKAQPM-PDGLPED-------IDEGRVNPRDDFKTRARYLTEKYEYDVTEARKI 507
KHNRL+M+A+P+ + L +D ID+ R+ P+DD K R + L+E++ +D A+KI
Sbjct: 585 KHNRLYMEARPLDKEDLQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDKDLAKKI 644
Query: 508 WCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWA 618
W FGPE GPN+LVD KGVQYL+EIKDSVVAGFQWA
Sbjct: 645 WAFGPETKGPNLLVDMCKGVQYLSEIKDSVVAGFQWA 681
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 192 bits (468), Expect = 2e-49
Identities = 92/212 (43%), Positives = 139/212 (65%), Gaps = 7/212 (3%)
Frame = +1
Query: 1 KTGTITTFK---NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI 171
KT TI K + + + ++F+ PVV++A EP NP++LPK+VEGL++++KS P+
Sbjct: 585 KTATICPMKMDEDVYIFRPLRFNTLPVVKIAAEPLNPSELPKMVEGLRKISKSYPLAVTK 644
Query: 172 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 351
EESGEH + G GEL+L+ +KDL E ++ + +K +DPVV++ ETV + S C +++PN
Sbjct: 645 VEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVTFCETVVDTSSMKCFAETPN 704
Query: 352 KHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGT 531
K N++ M A+P+ GL EDI+ G V+ K + ++Y++DV AR IW FGPE
Sbjct: 705 KRNKITMVAEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPEKQ 764
Query: 532 GPNILVDCSKGVQ----YLNEIKDSVVAGFQW 615
GPNIL+D + V+ LN +KDS+V GFQW
Sbjct: 765 GPNILLDDTLSVEVDKNLLNAVKDSIVQGFQW 796
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 113 bits (271), Expect = 1e-25
Identities = 56/119 (47%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 KTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEE 180
K+ T+++ KN M F VSP+++VA+EP NPADL LV+GLK L ++DP V+ +
Sbjct: 514 KSATLSSTKNCWPFSSMMFQVSPMLKVAIEPSNPADLGALVKGLKLLNRADPFVEYTVSQ 573
Query: 181 SGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLS-KSPNK 354
GEH++A AGE+HLE C KDLEE A + + SDP+VS++ET+ E L S K+P +
Sbjct: 574 RGEHVLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSFKETIEGEGLALIESLKAPRE 632
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 107 bits (256), Expect = 9e-24
Identities = 47/106 (44%), Positives = 74/106 (69%)
Frame = +1
Query: 1 KTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEE 180
K T+++ KN M F VSP+++VA+EP NP+DL LV+GLK L ++DP ++ E
Sbjct: 494 KNATLSSTKNCQPFSGMMFQVSPMLKVAIEPSNPSDLGALVKGLKLLNQADPFIEYTVSE 553
Query: 181 SGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 318
GEH++A AGE+HLE C+K+L+E A + ++ S P+VS+++T+ E
Sbjct: 554 RGEHVLAAAGEIHLEHCIKNLQERFARVQLEVSKPLVSFKDTIQGE 599
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 64.5 bits (150), Expect = 6e-11
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +1
Query: 67 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQ-CINEESGEHIVAGAGELHLEICLKDL 243
PV++VA+EPK AD K+ GL +LA+ DP +EE+ + ++ G GELHL+I + L
Sbjct: 457 PVIKVAIEPKTKADADKMATGLIKLAQEDPSFHFSRDEETNQTVIEGMGELHLDIIVDRL 516
Query: 244 EEDHACIPIKKSDPVVSYRETVAEESD 324
+ + + P V+YRE++++ S+
Sbjct: 517 KREFR-VEANVGAPQVNYRESISKISE 542
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 54.8 bits (126), Expect = 5e-08
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Frame = +1
Query: 67 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDL 243
PV+ +AV P + + + L R K DP + ++ ESGE I++G GELHL+I ++ +
Sbjct: 477 PVMSLAVSPISKDSGGQFSKALNRFQKEDPTFRVGLDPESGETIISGMGELHLDIYVERI 536
Query: 244 EEDHACIPIKKSDPVVSYRETVAE--ESDQLCLSKS--PNKHNRLFMKAQPMP 390
++ + K P V++RET+ + E D L +S ++ R+ +P+P
Sbjct: 537 RREYK-VDAKVGKPRVNFRETITQRAEFDYLHKKQSGGQGQYGRVCGYIEPLP 588
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -3
Query: 209 PAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTT 69
P+P+ D S C GS + + P+T+ AG S T +T
Sbjct: 342 PSPSEAIGTDGSSTSCGTGSSVTNAIAPATTTSTFAGLFASVTTSST 388
>06_01_0244 -
1844161-1844241,1844356-1844394,1844510-1844617,
1844638-1844685,1845058-1845111,1845214-1845268,
1845442-1845522,1846238-1846615,1847196-1847401
Length = 349
Score = 29.9 bits (64), Expect = 1.7
Identities = 27/87 (31%), Positives = 33/87 (37%)
Frame = +1
Query: 88 EPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIP 267
+P +PA LP EGL R A Q + E V GEL I LK+ I
Sbjct: 59 KPCDPAPLPTQCEGLLRGASEPESAQALQEPD----VLSVGELLGAIALKE-----PIIS 109
Query: 268 IKKSDPVVSYRETVAEESDQLCLSKSP 348
S P + + CLS SP
Sbjct: 110 SPSSSPQAVPEDNIDAVPSGCCLSSSP 136
>07_03_0896 + 22373348-22374946
Length = 532
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Frame = -3
Query: 266 GMQAWSSSRSLRQISRWS--SPAPATMCSPDSSLI-HCTMGSDLARRLRPSTSLGRSAGF 96
G AW +S W+ PA + P SS C G L L S LGR
Sbjct: 92 GAWAWDRPAETSVVSEWALKCAGPALVSLPASSFFAGCLAGGFLLTTLADSL-LGRRKML 150
Query: 95 LGSTATRTTGDTLNFITFMLWAF 27
L S A+ + L + +WA+
Sbjct: 151 LVSLASMSVAGVLTAFSPNVWAY 173
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 316 ESDQLCLSKSPNKHNRLFMKAQPMPDGLPE 405
E + LCL PN+H + + A+ +P LPE
Sbjct: 42 EKENLCLYGFPNEHWEVNLPAEEVPPELPE 71
>10_08_0081 + 14710478-14710822
Length = 114
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 350 LGDFERQSWSDSSATVSRYDTTGSDFLIGMQAWSS-SRSLRQISRWSSPAPAT 195
+ R SWSD V+R T+ + + W+ R +R S WSS AP T
Sbjct: 1 MSHLRRLSWSDQ--VVARQPTSEEEDVDAGGRWTEVRRKVRPHSWWSSNAPTT 51
>04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376
Length = 1135
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = -3
Query: 227 ISRWSSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTTGDTLNFI 48
++ W+ PAP T+ P++S + ++ SL G T T GD L ++
Sbjct: 1040 VAEWT-PAPETVSIPEASTDPSQLPHTAHWVMQFDGSLSLQGAGAGVTLTSPNGDVLRYL 1098
Query: 47 TFMLWAFLKVV 15
W+ + V
Sbjct: 1099 ATPSWSLTRSV 1109
>10_08_0621 + 19328357-19329545,19329967-19329986
Length = 402
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 484 DVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQW 615
DVT +R+I P G G I + GV +L S+V F+W
Sbjct: 322 DVTGSREIRMM-PFGAGRRICAGLNVGVMHLEYFVGSMVMEFEW 364
>07_01_0244 + 1786009-1788048
Length = 679
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 390 RHGLSLHEQTVVLVGRL*ETELVRFLSY 307
RHG++ ++++GRL LVR L Y
Sbjct: 397 RHGMTQFTAEIIILGRLRHRNLVRLLGY 424
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 290 TTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCS 186
TTGSD L G+Q + R+L I+ P +CS
Sbjct: 801 TTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
>11_06_0282 - 21884702-21885085
Length = 127
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 406 DIDEGRVNPRDDFKTRARYLTEKYEYDVTEARK 504
++D G V+P DDF ++ Y+ + D+ RK
Sbjct: 43 EVDAGVVDPDDDFYYKSLYVLHESSKDLRHVRK 75
>09_02_0302 -
7086017-7086124,7086125-7086796,7087511-7088070,
7088754-7089131,7089357-7089821,7090022-7090127,
7090219-7090294,7090407-7090648,7090824-7090904,
7091013-7091205,7091336-7091558,7091611-7091646,
7091694-7091790
Length = 1078
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +1
Query: 28 NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMV--------QCINEES 183
NA + + +VSP ++ V+P P LV+ L + DP++ + +E
Sbjct: 57 NAMQVDGLLKNVSPTTKIVVKPNEELKSPFLVKRHLFLKRPDPIILDELYSLTTKVTDEE 116
Query: 184 GEHIVAGAGELHLEICLKDLEE 249
V +G L + + L D++E
Sbjct: 117 SRQSVWVSGNLPINLKLVDIQE 138
>06_02_0251 -
13478902-13478952,13478989-13479055,13479168-13479379,
13480144-13481540,13481574-13482432,13482537-13482836
Length = 961
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 106 DLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICL-KDLEEDHACIPIKKSD 282
DLP+ E + + AK+ NEE E I+ +LH E+C KD + H + +
Sbjct: 684 DLPE--ESIHQSAKNSTENTSYNEEPEESIIKRKIKLHQEMCNDKDAQTKHKVEGVSEIG 741
Query: 283 P 285
P
Sbjct: 742 P 742
>06_01_0993 +
7710016-7710977,7711081-7711316,7711422-7711501,
7711977-7712072,7712995-7713892,7713983-7714093,
7714657-7714751
Length = 825
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 197 TMCSPDSSLIHCTMGSDLARRLRPSTSLGRSA 102
+MCS +S HCT D R+RP +L R A
Sbjct: 530 SMCS-ESFSSHCTKSQDSVVRMRPDDTLVRRA 560
>02_03_0145 - 15715181-15715834,15716049-15716271,15717318-15718777
Length = 778
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 527 VPAPTSWWIAPKEFSTSMKLRTLLWLDSSG 616
VP+P WW P S + RT L S+G
Sbjct: 589 VPSPMPWWCRPSSVSRDGEARTELNPSSAG 618
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.134 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,275,275
Number of Sequences: 37544
Number of extensions: 439811
Number of successful extensions: 1405
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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