Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26f23
(619 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 381 e-106
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 375 e-104
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 163 7e-41
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 159 1e-39
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 60 9e-10
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 33 0.22
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 31 0.50
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 29 2.0
L07144-11|AAM54163.1| 144|Caenorhabditis elegans Hypothetical p... 29 3.5
AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical ... 29 3.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.5
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 28 6.1
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 28 6.1
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 28 6.1
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 28 6.1
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 28 6.1
Z69788-7|CAM33502.1| 132|Caenorhabditis elegans Hypothetical pr... 27 8.1
U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical pr... 27 8.1
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 27 8.1
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 27 8.1
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 27 8.1
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 381 bits (937), Expect = e-106
Identities = 175/206 (84%), Positives = 190/206 (92%)
Frame = +1
Query: 1 KTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEE 180
K GTITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI EE
Sbjct: 475 KGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEE 534
Query: 181 SGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHN 360
SGEHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHN
Sbjct: 535 SGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHN 594
Query: 361 RLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 540
RL AQPMPDGL +DI+ G VN RD+FK RA+ L EKYEYDVTEARKIWCFGP+GTGPN
Sbjct: 595 RLHCTAQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPN 654
Query: 541 ILVDCSKGVQYLNEIKDSVVAGFQWA 618
+L+D +KGVQYLNEIKDSVVAGFQWA
Sbjct: 655 LLMDVTKGVQYLNEIKDSVVAGFQWA 680
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 375 bits (923), Expect = e-104
Identities = 173/206 (83%), Positives = 189/206 (91%)
Frame = +1
Query: 1 KTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEE 180
K GTITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI EE
Sbjct: 475 KGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEE 534
Query: 181 SGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHN 360
SGEHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHN
Sbjct: 535 SGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHN 594
Query: 361 RLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 540
RL AQPMPDGL +DI+ G V+ RD+FK RA+Y EKYEY VTEARKIWCFGP+GTGPN
Sbjct: 595 RLHCTAQPMPDGLADDIEGGTVSARDEFKARAKYPGEKYEYAVTEARKIWCFGPDGTGPN 654
Query: 541 ILVDCSKGVQYLNEIKDSVVAGFQWA 618
+L+D +KGVQYLNEIKDSVVAGFQWA
Sbjct: 655 LLMDVTKGVQYLNEIKDSVVAGFQWA 680
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 163 bits (397), Expect = 7e-41
Identities = 81/213 (38%), Positives = 131/213 (61%), Gaps = 7/213 (3%)
Frame = +1
Query: 1 KTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI 171
KT TI ++ + + +KF+ V++AVEP NP++LPK+++GL+++ KS P++
Sbjct: 565 KTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKSYPLLTTR 624
Query: 172 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 351
EESGEH++ G GE +++ + D+ + + I IK +DPVV++ ETV E S C +++PN
Sbjct: 625 VEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPN 684
Query: 352 KHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGT 531
K N++ M A+P+ L EDI+ V + + + KY +D+ AR IW FGP+ T
Sbjct: 685 KKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGPDTT 744
Query: 532 GPNILVD----CSKGVQYLNEIKDSVVAGFQWA 618
GPNIL+D L+ +++S+V GFQWA
Sbjct: 745 GPNILLDDTLPSEVDKHLLSTVRESLVQGFQWA 777
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 159 bits (387), Expect = 1e-39
Identities = 80/213 (37%), Positives = 130/213 (61%), Gaps = 7/213 (3%)
Frame = +1
Query: 1 KTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI 171
KT TI ++ + + +KF+ V++AVEP NP++LPK+++GL+++ KS P++
Sbjct: 440 KTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKSYPLLTTR 499
Query: 172 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 351
EESGEH++ G GE +++ + D+ + + I IK +DPVV++ ETV E S C +++PN
Sbjct: 500 VEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPN 559
Query: 352 KHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGT 531
K N++ M A+P+ L EDI+ V + + + KY +D+ AR IW FG + T
Sbjct: 560 KKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGLDTT 619
Query: 532 GPNILVD----CSKGVQYLNEIKDSVVAGFQWA 618
GPNIL+D L+ +++S+V GFQWA
Sbjct: 620 GPNILLDDTLPSEVDKHLLSTVRESLVQGFQWA 652
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 65.3 bits (152), Expect = 3e-11
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +1
Query: 67 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDL 243
PV+ +A++P N D ++ L R K DP + N+E+ E IV+G GELHLEI + +
Sbjct: 446 PVISMAIKPVNRKDADNFIKALTRFTKEDPTFRREYNQEAKETIVSGMGELHLEIYAQRM 505
Query: 244 EEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPED 408
+ ++ C P++ P V+YRE + K F + + + D LP D
Sbjct: 506 KSEYNC-PVELGKPTVAYRECLGSPYKFHFRHKKQTGGQGQFGEIEGVIDPLPSD 559
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 60.5 bits (140), Expect = 9e-10
Identities = 33/94 (35%), Positives = 55/94 (58%)
Frame = +1
Query: 40 MKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELH 219
+K+ + +VRV++ + D+ L E LK LA D ++ + E+GE + AGE+H
Sbjct: 467 LKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVH 526
Query: 220 LEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 321
L+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 527 LQKCIKDL-NDLGLVDLDVSEPIVPFMETVIEDS 559
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 60.5 bits (140), Expect = 9e-10
Identities = 33/94 (35%), Positives = 55/94 (58%)
Frame = +1
Query: 40 MKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELH 219
+K+ + +VRV++ + D+ L E LK LA D ++ + E+GE + AGE+H
Sbjct: 467 LKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVH 526
Query: 220 LEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 321
L+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 527 LQKCIKDL-NDLGLVDLDVSEPIVPFMETVIEDS 559
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 VEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHAC 261
+EP + L + + L+ L + DP ++ + ++G+ IV GELHLE +KD + +
Sbjct: 399 IEPPSNRQLNQFNKALEELTREDPSMKIRFDRDTGQTIVETQGELHLE-AIKDRLKRNYK 457
Query: 262 IPIKKSDPVVSYRETVAEE 318
+ + V+YRE + EE
Sbjct: 458 LDVFIGKLQVAYREMLTEE 476
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 256 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPR 435
AC+PI VS E ++ES+ K +K + +KA + DG+P D D+G +
Sbjct: 228 ACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDGSDEHQ 286
Query: 436 DDFKT 450
D KT
Sbjct: 287 CDCKT 291
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 31.5 bits (68), Expect = 0.50
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = -3
Query: 323 SDSSATVSRYDTTGSDFLIGMQAW-SSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSD 147
SDSS++ S T+ S + SSS S S SS + + + DSS + S
Sbjct: 43 SDSSSSSSTASTSSSSSTAATSSDDSSSSSSSSSSSASSTSSSDTTTADSSSTTSSDSST 102
Query: 146 LARRLRPSTSLGRSAGFLGSTATRTTGDTL-NFITFMLWA 30
+ STS S + ST++ TT + +F T WA
Sbjct: 103 TSSNSSSSTSSSDSTSVVSSTSSSTTTTCVDSFSTCTSWA 142
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 31 AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSD 153
A + F +P V V + NP L +L+E ++++ K +
Sbjct: 71 AQGKTTITFQTTPAVMVCISKANPEALAQLIEAIRKIVKGE 111
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 164 CTMGSDLARRLRPSTSLGRS 105
C MGS+ A+RLRP + GRS
Sbjct: 202 CVMGSEDAQRLRPDRAFGRS 221
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +1
Query: 196 VAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMK 375
V GA E+ LE ++ + D A I + PVV+ R A+ ++S +
Sbjct: 293 VTGAAEI-LEFPEEEKKIDMATIHRTPTPPVVASRPATAKAPGTPA-NRSATALEAKSVS 350
Query: 376 AQPMPDGLPEDIDEGRVNPRDD 441
QP P+ E+ DEG + DD
Sbjct: 351 QQPTPESSEEEEDEGNGDEDDD 372
>L07144-11|AAM54163.1| 144|Caenorhabditis elegans Hypothetical
protein R05D3.12 protein.
Length = 144
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 292 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 471
+Y VA DQ+ + +++ ++ K P GL + DE VN D+ +R
Sbjct: 62 TYIGGVAMREDQIIWLRD-SENRKMIAKEVTYPPGLLKIFDEILVNAADNKARDSRIYVL 120
Query: 472 KYEYDVTEARKIWCFG 519
+ YD T +R CFG
Sbjct: 121 RQSYD-TLSRHDNCFG 135
>AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical
protein Y62E10A.10 protein.
Length = 234
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 412 DEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKD 591
+ GR P+ F R +YL + +++A++ GP P+ + + KG +N I
Sbjct: 61 ENGRFLPKTSFNARRQYLCAEETGYLSKAQQRPAKGPNPMDPSQMTEMLKG-NMMNMIPM 119
Query: 592 SVVAGF 609
VV G+
Sbjct: 120 IVVGGW 125
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 128 PSTSLGRSAGFLGSTATRTTGDTLN 54
PSTS G AGFL STA + G N
Sbjct: 142 PSTSSGLPAGFLNSTANSSVGANNN 166
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 370 MKAQPMPDGLPEDIDEGRVNP---RDDFKTRARYLTEKYEYDVTEARKI 507
++ P P PE R NP RDD + ++ E+ VTE R I
Sbjct: 87 IQIHPAPIAGPESTSSFRTNPEENRDDEEDNVEETDQEIEFPVTEERSI 135
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 213 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 103
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 218 WSSPAPATMCSPDSSLIHCT 159
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 213 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 103
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 218 WSSPAPATMCSPDSSLIHCT 159
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>Z69788-7|CAM33502.1| 132|Caenorhabditis elegans Hypothetical
protein F09A5.9 protein.
Length = 132
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +1
Query: 139 LAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 318
L SD ++ E GEH GE+ + L+ H C +++D ++ E A+
Sbjct: 52 LFDSDDVLDETTVEYGEHFTLDGGEIEIFSTEPYLQIVHKCFGTERTD-IIDLSEFEADS 110
Query: 319 SDQL 330
+D L
Sbjct: 111 NDIL 114
>U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical
protein F10G2.1 protein.
Length = 201
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 331 CLSKSPNKHNRLFMKAQPMPDGLPEDIDE 417
C K NK++ + P PD + E+ DE
Sbjct: 116 CSEKLENKNSTCYQNWDPFPDAIDEETDE 144
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 265 PIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 393
P S+ V + R+T E+ Q ++K+P+ N ++ P+P+
Sbjct: 1626 PGPTSEHVATIRKTPVRETHQSSITKAPSLENVAKIRQSPVPE 1668
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -3
Query: 320 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLI 168
+ +T + Y+ G+DFL G+Q + +S A A + P+SS +
Sbjct: 379 EKKSTAAEYNPFGADFLSGIQNGKEAPPSASAELLASEAIARLPKPESSSV 429
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -3
Query: 320 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLI 168
+ +T + Y+ G+DFL G+Q + +S A A + P+SS +
Sbjct: 379 EKKSTAAEYNPFGADFLSGIQNGKEAPPSASAELLASEAIARLPKPESSSV 429
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.134 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,622,224
Number of Sequences: 27780
Number of extensions: 347919
Number of successful extensions: 1107
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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