Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26f02
         (115 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    20   2.4  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    20   2.4  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               20   3.2  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    19   7.4  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
          determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 3  KKKIFLEKTNKKCNQK 50
          K+K+  E+TN+K N +
Sbjct: 25 KEKLLEERTNRKRNSR 40


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
          determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 3  KKKIFLEKTNKKCNQK 50
          K+K+  E+TN+K N +
Sbjct: 25 KEKLLEERTNRKRNSR 40


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 30 NKKCNQKCFFT 62
          N KC  KCF T
Sbjct: 54 NLKCYLKCFMT 64


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 2   EKKNFFGKN*QKM*SKV 52
           E++N FG+N + +  KV
Sbjct: 96  ERRNIFGENDELIAEKV 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,972
Number of Sequences: 438
Number of extensions: 208
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 18
effective length of database: 138,459
effective search space used:  2630721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)