Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26e24
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002849-1|AAH02849.1| 177|Homo sapiens coatomer protein comple... 217 3e-56
AF151878-1|AAD34115.1| 177|Homo sapiens CGI-120 protein protein. 217 3e-56
AF086911-1|AAP97141.1| 177|Homo sapiens z-cop protein. 217 3e-56
AB047848-1|BAB17659.1| 177|Homo sapiens zeta1-COP protein. 217 3e-56
AK223188-1|BAD96908.1| 177|Homo sapiens coatomer protein comple... 215 1e-55
BC015924-1|AAH15924.1| 210|Homo sapiens coatomer protein comple... 183 4e-46
AB047849-1|BAB17660.1| 210|Homo sapiens zeta2-COP protein. 183 4e-46
AB037938-1|BAA90670.1| 210|Homo sapiens nonclathrin coat protei... 183 4e-46
CR457100-1|CAG33381.1| 144|Homo sapiens AP4S1 protein. 39 0.014
AF155159-1|AAD43329.1| 144|Homo sapiens adaptor-related protein... 39 0.014
AB030654-1|BAA82970.1| 144|Homo sapiens AP-4 clathrin adaptor-r... 39 0.014
CR456785-1|CAG33066.1| 493|Homo sapiens ARIH2 protein. 32 2.2
BC000422-1|AAH00422.1| 493|Homo sapiens ariadne homolog 2 (Dros... 32 2.2
AK223550-1|BAD97270.1| 493|Homo sapiens ariadne homolog 2 varia... 32 2.2
AJ130978-1|CAA10276.1| 493|Homo sapiens Ariadne-2 protein (ARI2... 32 2.2
AF183427-1|AAG09696.1| 481|Homo sapiens HT005 protein protein. 32 2.2
AF099149-1|AAC82469.1| 493|Homo sapiens TRIAD1 type I protein. 32 2.2
AL137066-2|CAH70097.1| 402|Homo sapiens B-box and SPRY domain c... 31 5.0
AK000157-1|BAA90980.1| 301|Homo sapiens protein ( Homo sapiens ... 31 5.0
AJ276691-1|CAC09324.1| 402|Homo sapiens putative nuclear factor... 31 5.0
AB015319-1|BAA33391.1| 158|Homo sapiens sigma1A subunit of AP-1... 30 6.6
AC004876-2|AAD45829.1| 157|Homo sapiens clathrin coat assembly ... 30 8.7
>BC002849-1|AAH02849.1| 177|Homo sapiens coatomer protein complex,
subunit zeta 1 protein.
Length = 177
Score = 217 bits (530), Expect = 3e-56
Identities = 100/169 (59%), Positives = 136/169 (80%)
Frame = +1
Query: 130 MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 309
ME + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1 MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59
Query: 310 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 489
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60 ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119
Query: 490 AVMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPGIAISK 636
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+ + +K
Sbjct: 120 GLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAK 168
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSA+EQ+KWSLL+
Sbjct: 162 QVLQSAKEQIKWSLLR 177
>AF151878-1|AAD34115.1| 177|Homo sapiens CGI-120 protein protein.
Length = 177
Score = 217 bits (530), Expect = 3e-56
Identities = 100/169 (59%), Positives = 136/169 (80%)
Frame = +1
Query: 130 MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 309
ME + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1 MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59
Query: 310 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 489
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60 ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119
Query: 490 AVMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPGIAISK 636
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+ + +K
Sbjct: 120 GLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAK 168
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSA+EQ+KWSLL+
Sbjct: 162 QVLQSAKEQIKWSLLR 177
>AF086911-1|AAP97141.1| 177|Homo sapiens z-cop protein.
Length = 177
Score = 217 bits (530), Expect = 3e-56
Identities = 100/169 (59%), Positives = 136/169 (80%)
Frame = +1
Query: 130 MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 309
ME + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1 MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59
Query: 310 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 489
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60 ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119
Query: 490 AVMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPGIAISK 636
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+ + +K
Sbjct: 120 GLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAK 168
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSA+EQ+KWSLL+
Sbjct: 162 QVLQSAKEQIKWSLLR 177
>AB047848-1|BAB17659.1| 177|Homo sapiens zeta1-COP protein.
Length = 177
Score = 217 bits (530), Expect = 3e-56
Identities = 100/169 (59%), Positives = 136/169 (80%)
Frame = +1
Query: 130 MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 309
ME + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1 MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59
Query: 310 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 489
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60 ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119
Query: 490 AVMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPGIAISK 636
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+ + +K
Sbjct: 120 GLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAK 168
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSA+EQ+KWSLL+
Sbjct: 162 QVLQSAKEQIKWSLLR 177
>AK223188-1|BAD96908.1| 177|Homo sapiens coatomer protein complex,
subunit zeta 1 variant protein.
Length = 177
Score = 215 bits (525), Expect = 1e-55
Identities = 99/169 (58%), Positives = 135/169 (79%)
Frame = +1
Query: 130 MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 309
ME + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1 MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59
Query: 310 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 489
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+ +LR+N+E+R L+EN++
Sbjct: 60 ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLRQMLRKNVEKRALLENME 119
Query: 490 AVMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPGIAISK 636
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+ + +K
Sbjct: 120 GLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAK 168
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSA+EQ+KWSLL+
Sbjct: 162 QVLQSAKEQIKWSLLR 177
>BC015924-1|AAH15924.1| 210|Homo sapiens coatomer protein complex,
subunit zeta 2 protein.
Length = 210
Score = 183 bits (446), Expect = 4e-46
Identities = 86/165 (52%), Positives = 119/165 (72%)
Frame = +1
Query: 142 LFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 321
L EP+LY +K + ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 322 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 501
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 502 AFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPGIAISK 636
DEI DGGVIL++DP ++ + R +D L EQ+VA + +K
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAK 201
Score = 33.5 bits (73), Expect = 0.71
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSA+EQ+KWSLLK
Sbjct: 195 QVLQSAKEQIKWSLLK 210
>AB047849-1|BAB17660.1| 210|Homo sapiens zeta2-COP protein.
Length = 210
Score = 183 bits (446), Expect = 4e-46
Identities = 86/165 (52%), Positives = 119/165 (72%)
Frame = +1
Query: 142 LFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 321
L EP+LY +K + ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 322 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 501
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 502 AFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPGIAISK 636
DEI DGGVIL++DP ++ + R +D L EQ+VA + +K
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAK 201
Score = 33.5 bits (73), Expect = 0.71
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSA+EQ+KWSLLK
Sbjct: 195 QVLQSAKEQIKWSLLK 210
>AB037938-1|BAA90670.1| 210|Homo sapiens nonclathrin coat protein
zeta-COP protein.
Length = 210
Score = 183 bits (446), Expect = 4e-46
Identities = 86/165 (52%), Positives = 119/165 (72%)
Frame = +1
Query: 142 LFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 321
L EP+LY +K + ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 322 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 501
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 502 AFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPGIAISK 636
DEI DGGVIL++DP ++ + R +D L EQ+VA + +K
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAK 201
Score = 33.5 bits (73), Expect = 0.71
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSA+EQ+KWSLLK
Sbjct: 195 QVLQSAKEQIKWSLLK 210
>CR457100-1|CAG33381.1| 144|Homo sapiens AP4S1 protein.
Length = 144
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +1
Query: 163 IVKGMCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 339
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 340 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 519
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 520 DGGVILDADPTSIVS 564
G I++ + I++
Sbjct: 119 LNGCIVETNRARILA 133
>AF155159-1|AAD43329.1| 144|Homo sapiens adaptor-related protein
complex AP-4 sigma4 subunit protein.
Length = 144
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +1
Query: 163 IVKGMCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 339
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 340 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 519
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 520 DGGVILDADPTSIVS 564
G I++ + I++
Sbjct: 119 LNGCIVETNRARILA 133
>AB030654-1|BAA82970.1| 144|Homo sapiens AP-4 clathrin
adaptor-related complex sigma4 subunit protein.
Length = 144
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +1
Query: 163 IVKGMCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 339
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 340 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 519
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 520 DGGVILDADPTSIVS 564
G I++ + I++
Sbjct: 119 LNGCIVETNRARILA 133
>CR456785-1|CAG33066.1| 493|Homo sapiens ARIH2 protein.
Length = 493
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -2
Query: 546 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 385
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 94 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 153
Query: 384 MGASH 370
+ H
Sbjct: 154 LACQH 158
>BC000422-1|AAH00422.1| 493|Homo sapiens ariadne homolog 2
(Drosophila) protein.
Length = 493
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -2
Query: 546 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 385
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 94 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 153
Query: 384 MGASH 370
+ H
Sbjct: 154 LACQH 158
>AK223550-1|BAD97270.1| 493|Homo sapiens ariadne homolog 2 variant
protein.
Length = 493
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -2
Query: 546 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 385
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 94 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 153
Query: 384 MGASH 370
+ H
Sbjct: 154 LACQH 158
>AJ130978-1|CAA10276.1| 493|Homo sapiens Ariadne-2 protein (ARI2)
protein.
Length = 493
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -2
Query: 546 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 385
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 94 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 153
Query: 384 MGASH 370
+ H
Sbjct: 154 LACQH 158
>AF183427-1|AAG09696.1| 481|Homo sapiens HT005 protein protein.
Length = 481
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -2
Query: 546 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 385
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 81 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 140
Query: 384 MGASH 370
+ H
Sbjct: 141 LACQH 145
>AF099149-1|AAC82469.1| 493|Homo sapiens TRIAD1 type I protein.
Length = 493
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -2
Query: 546 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 385
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 94 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 153
Query: 384 MGASH 370
+ H
Sbjct: 154 LACQH 158
>AL137066-2|CAH70097.1| 402|Homo sapiens B-box and SPRY domain
containing protein.
Length = 402
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 442 LLRRNMERRVLMENLDAVMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPG 621
+ R E +++ ++ ML F+E C +L + V + TED+ + E+TV+P
Sbjct: 183 IFERTEEAEGILDPQESEMLNFNEKCTRSPLLTQLWATAVLGSLSGTEDIRIDERTVSPF 242
Query: 622 IAIS 633
+ +S
Sbjct: 243 LQLS 246
>AK000157-1|BAA90980.1| 301|Homo sapiens protein ( Homo sapiens
cDNA FLJ20150 fis, clone COL08263. ).
Length = 301
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 442 LLRRNMERRVLMENLDAVMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPG 621
+ R E +++ ++ ML F+E C +L + V + TED+ + E+TV+P
Sbjct: 82 IFERTEEAEGILDPQESEMLNFNEKCTRSPLLTQLWATAVLGSLSGTEDIRIDERTVSPF 141
Query: 622 IAIS 633
+ +S
Sbjct: 142 LQLS 145
>AJ276691-1|CAC09324.1| 402|Homo sapiens putative nuclear factor
protein.
Length = 402
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 442 LLRRNMERRVLMENLDAVMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAPG 621
+ R E +++ ++ ML F+E C +L + V + TED+ + E+TV+P
Sbjct: 183 IFERTEEAEGILDPQESEMLNFNEKCTRSPLLTQLWATAVLGSLSGTEDIRIDERTVSPF 242
Query: 622 IAIS 633
+ +S
Sbjct: 243 LQLS 246
>AB015319-1|BAA33391.1| 158|Homo sapiens sigma1A subunit of AP-1
clathrin adaptor complex protein.
Length = 158
Score = 30.3 bits (65), Expect = 6.6
Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 3/155 (1%)
Frame = +1
Query: 163 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIML---DGLTC 333
+++ M + +G L K+Y + + KE+K + L ++ L
Sbjct: 1 MMRFMLLFSRQGKLRLQKWY---LATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKV 57
Query: 334 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 513
VYK L+F +NELI +++ E + E ++ N + DE
Sbjct: 58 VYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDE 116
Query: 514 ICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAP 618
GG + D S++ A+ D+ L E+ +P
Sbjct: 117 FLMGGDVQDTSKKSVLK--AIEQADL-LQEEDESP 148
>AC004876-2|AAD45829.1| 157|Homo sapiens clathrin coat assembly
protein AP19 protein.
Length = 157
Score = 29.9 bits (64), Expect = 8.7
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 3/151 (1%)
Frame = +1
Query: 175 MCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIML---DGLTCVYKS 345
M + +G L K+Y + + KE+K + L ++ L VYK
Sbjct: 4 MLLFSRQGKLRLQKWY---LATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKR 60
Query: 346 NVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICDG 525
L+F +NELI +++ E + E ++ N + DE G
Sbjct: 61 YASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDEFLMG 119
Query: 526 GVILDADPTSIVSRAALRTEDVPLGEQTVAP 618
G + D S++ A+ D+ L E+ +P
Sbjct: 120 GDVQDTSKKSVLK--AIEQADL-LQEEDESP 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,046,204
Number of Sequences: 237096
Number of extensions: 2294623
Number of successful extensions: 5297
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5289
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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