Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26e24
(679 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011358-1|AAR96150.1| 169|Drosophila melanogaster RE70427p pro... 254 8e-68
AE014296-2782|AAN11738.1| 169|Drosophila melanogaster CG3948-PB... 254 8e-68
AE014296-2780|AAF49428.2| 174|Drosophila melanogaster CG3948-PA... 254 8e-68
AB037672-1|BAA90485.1| 174|Drosophila melanogaster nonclathrin ... 254 8e-68
AE014296-2781|AAN11737.1| 163|Drosophila melanogaster CG3948-PC... 247 1e-65
AF145648-1|AAD38623.1| 448|Drosophila melanogaster BcDNA.GH0838... 32 0.83
AE014296-3346|AAN12125.2| 448|Drosophila melanogaster CG5498-PB... 32 0.83
AY071026-1|AAL48648.1| 191|Drosophila melanogaster RE10615p pro... 30 2.5
AF228056-1|AAG43053.1| 191|Drosophila melanogaster adaptor prot... 30 2.5
AE013599-3755|AAF47120.2| 191|Drosophila melanogaster CG3029-PA... 30 2.5
AE013599-1085|AAS64870.1| 147|Drosophila melanogaster CG33475-P... 29 4.4
AY061172-1|AAL28720.1| 157|Drosophila melanogaster LD14109p pro... 29 5.8
AF228054-1|AAG43051.1| 164|Drosophila melanogaster clathrin-ass... 29 5.8
AE014297-3422|AAF56212.2| 157|Drosophila melanogaster CG5864-PA... 29 5.8
AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA... 29 5.8
>BT011358-1|AAR96150.1| 169|Drosophila melanogaster RE70427p
protein.
Length = 169
Score = 254 bits (622), Expect = 8e-68
Identities = 112/151 (74%), Positives = 139/151 (92%)
Frame = +1
Query: 163 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 342
I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8 IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67
Query: 343 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 522
SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68 SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127
Query: 523 GGVILDADPTSIVSRAALRTEDVPLGEQTVA 615
GG+ILDADP+S+V R LR +D+P+ EQTVA
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVA 158
>AE014296-2782|AAN11738.1| 169|Drosophila melanogaster CG3948-PB,
isoform B protein.
Length = 169
Score = 254 bits (622), Expect = 8e-68
Identities = 112/151 (74%), Positives = 139/151 (92%)
Frame = +1
Query: 163 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 342
I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8 IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67
Query: 343 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 522
SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68 SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127
Query: 523 GGVILDADPTSIVSRAALRTEDVPLGEQTVA 615
GG+ILDADP+S+V R LR +D+P+ EQTVA
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVA 158
>AE014296-2780|AAF49428.2| 174|Drosophila melanogaster CG3948-PA,
isoform A protein.
Length = 174
Score = 254 bits (622), Expect = 8e-68
Identities = 112/151 (74%), Positives = 139/151 (92%)
Frame = +1
Query: 163 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 342
I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8 IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67
Query: 343 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 522
SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68 SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127
Query: 523 GGVILDADPTSIVSRAALRTEDVPLGEQTVA 615
GG+ILDADP+S+V R LR +D+P+ EQTVA
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVA 158
Score = 34.7 bits (76), Expect = 0.12
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSAREQLKWS+LK
Sbjct: 159 QVLQSAREQLKWSILK 174
>AB037672-1|BAA90485.1| 174|Drosophila melanogaster nonclathrin
coat protein zeta-COP protein.
Length = 174
Score = 254 bits (622), Expect = 8e-68
Identities = 112/151 (74%), Positives = 139/151 (92%)
Frame = +1
Query: 163 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 342
I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8 IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67
Query: 343 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 522
SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68 SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127
Query: 523 GGVILDADPTSIVSRAALRTEDVPLGEQTVA 615
GG+ILDADP+S+V R LR +D+P+ EQTVA
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVA 158
Score = 34.7 bits (76), Expect = 0.12
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSAREQLKWS+LK
Sbjct: 159 QVLQSAREQLKWSILK 174
>AE014296-2781|AAN11737.1| 163|Drosophila melanogaster CG3948-PC,
isoform C protein.
Length = 163
Score = 247 bits (604), Expect = 1e-65
Identities = 109/147 (74%), Positives = 135/147 (91%)
Frame = +1
Query: 175 MCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYKSNVD 354
MCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYKSNVD
Sbjct: 1 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYKSNVD 60
Query: 355 LFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICDGGVI 534
LFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICDGG+I
Sbjct: 61 LFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICDGGII 120
Query: 535 LDADPTSIVSRAALRTEDVPLGEQTVA 615
LDADP+S+V R LR +D+P+ EQTVA
Sbjct: 121 LDADPSSVVKRVDLRNDDIPIAEQTVA 147
Score = 34.7 bits (76), Expect = 0.12
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 617 QVLQSAREQLKWSLLK 664
QVLQSAREQLKWS+LK
Sbjct: 148 QVLQSAREQLKWSILK 163
>AF145648-1|AAD38623.1| 448|Drosophila melanogaster BcDNA.GH08385
protein.
Length = 448
Score = 31.9 bits (69), Expect = 0.83
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 442 LLRRNMERRVL-MENLDAVMLAFDEICDGGVILDA 543
LL +N ERR L + N+++++ + DE + GV+LDA
Sbjct: 295 LLEKNHERRSLALHNIESLLSSVDEAQNSGVVLDA 329
>AE014296-3346|AAN12125.2| 448|Drosophila melanogaster CG5498-PB
protein.
Length = 448
Score = 31.9 bits (69), Expect = 0.83
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 442 LLRRNMERRVL-MENLDAVMLAFDEICDGGVILDA 543
LL +N ERR L + N+++++ + DE + GV+LDA
Sbjct: 295 LLEKNHERRSLALHNIESLLSSVDEAQNSGVVLDA 329
>AY071026-1|AAL48648.1| 191|Drosophila melanogaster RE10615p
protein.
Length = 191
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 334 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 513
+Y+ L+F S E+EL + ++ E++ E ++ + DAV E
Sbjct: 64 IYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIF-HADAVHHILSE 122
Query: 514 ICDGGVILDADPTSIVSR 567
+ GG++L + I++R
Sbjct: 123 LVMGGMVLQTNMNDIMAR 140
>AF228056-1|AAG43053.1| 191|Drosophila melanogaster adaptor protein
complex AP-3 smallchain sigma3 protein.
Length = 191
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 334 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 513
+Y+ L+F S E+EL + ++ E++ E ++ + DAV E
Sbjct: 64 IYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIF-HADAVHHILSE 122
Query: 514 ICDGGVILDADPTSIVSR 567
+ GG++L + I++R
Sbjct: 123 LVMGGMVLQTNMNDIMAR 140
>AE013599-3755|AAF47120.2| 191|Drosophila melanogaster CG3029-PA
protein.
Length = 191
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 334 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 513
+Y+ L+F S E+EL + ++ E++ E ++ + DAV E
Sbjct: 64 IYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIF-HADAVHHILSE 122
Query: 514 ICDGGVILDADPTSIVSR 567
+ GG++L + I++R
Sbjct: 123 LVMGGMVLQTNMNDIMAR 140
>AE013599-1085|AAS64870.1| 147|Drosophila melanogaster CG33475-PA
protein.
Length = 147
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +1
Query: 91 SEKLLTHTMVHTTMEGSLFEPTLYIVKGMCILDYEGNRILAKYY 222
S KL + + ++ ++ T+Y +K + I ++ NR+++K Y
Sbjct: 34 STKLFKNIFLDNRIQNAVSNRTIYNIKNLAICNFLNNRLISKVY 77
>AY061172-1|AAL28720.1| 157|Drosophila melanogaster LD14109p
protein.
Length = 157
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/92 (20%), Positives = 41/92 (44%)
Frame = +1
Query: 334 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 513
VYK L+F ++NEL+ +++ E + E ++ N + DE
Sbjct: 58 VYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDE 116
Query: 514 ICDGGVILDADPTSIVSRAALRTEDVPLGEQT 609
+ GG I + +++ A+ ++D+ ++T
Sbjct: 117 LLIGGEIQETSKKNVLK--AIASQDLLQEDET 146
>AF228054-1|AAG43051.1| 164|Drosophila melanogaster
clathrin-associated adaptor complexAP-1 small chain
sigma1 protein.
Length = 164
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/92 (20%), Positives = 41/92 (44%)
Frame = +1
Query: 334 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 513
VYK L+F ++NEL+ +++ E + E ++ N + DE
Sbjct: 58 VYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDE 116
Query: 514 ICDGGVILDADPTSIVSRAALRTEDVPLGEQT 609
+ GG I + +++ A+ ++D+ ++T
Sbjct: 117 LLIGGEIQETSKKNVLK--AIASQDLLQEDET 146
>AE014297-3422|AAF56212.2| 157|Drosophila melanogaster CG5864-PA
protein.
Length = 157
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/92 (20%), Positives = 41/92 (44%)
Frame = +1
Query: 334 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 513
VYK L+F ++NEL+ +++ E + E ++ N + DE
Sbjct: 58 VYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDE 116
Query: 514 ICDGGVILDADPTSIVSRAALRTEDVPLGEQT 609
+ GG I + +++ A+ ++D+ ++T
Sbjct: 117 LLIGGEIQETSKKNVLK--AIASQDLLQEDET 146
>AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA
protein.
Length = 1669
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 561 KPGSAAHRGRAPGRANSGPRYCNQQGSNLSGP 656
KPGS + G PG AN P N+ + + P
Sbjct: 1160 KPGSPSEEGSKPGSANMSPNASNKSNNGPTKP 1191
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,400,049
Number of Sequences: 53049
Number of extensions: 675984
Number of successful extensions: 1491
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -