Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26e22
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   0.67 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   3.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   8.3  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 526 NHIFIHIIPQGTPYILIPFIVIIETIRKYY 615
           N I+ +  P+  PYI I F+VII     YY
Sbjct: 207 NEIYYNCCPE--PYIDITFVVIIRRRTLYY 234


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -3

Query: 337 NVLNSLCNFFEMKFHIIKCRFGINQNLYGINNNPKIVLIQFIGKF 203
           NV   +C+ + ++F  +  ++GI QN        +I ++   G F
Sbjct: 48  NVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMF 92


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 577 PFIVIIETIRKYYSTWNFSSTINS 648
           PF++ I   R  +  +NF  TIN+
Sbjct: 485 PFLIKIRQYRLNHKPFNFHITINA 508


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 577 PFIVIIETIRKYYSTWNFSSTINS 648
           PF++ I   R  +  +NF  TIN+
Sbjct: 485 PFLIKIRQYRLNHKPFNFHITINA 508


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 540 SYNSTRNTLYFNTIYSNY 593
           S+  T N  YF+  Y NY
Sbjct: 209 SWRITHNFFYFDPRYGNY 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,414
Number of Sequences: 438
Number of extensions: 2145
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)