Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26e19
         (705 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0363 + 18169537-18169839                                         29   2.7  
07_01_0223 - 1642553-1643676,1643725-1644541                           28   8.3  

>02_03_0363 + 18169537-18169839
          Length = 100

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 144 WTASGGTTRKHQFQNICYVLVICYVFYRAEQQ 239
           W AS  ++ +H F  +C +L  C+VF  ++QQ
Sbjct: 2   WAASSSSSMQHLFL-LCRLLGFCFVFTASQQQ 32


>07_01_0223 - 1642553-1643676,1643725-1644541
          Length = 646

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 169 GSISSKTFVMSWSFVTYSTAPS 234
           G++S K +V+ WSF   S APS
Sbjct: 242 GTVSGKHYVLGWSFGMNSPAPS 263


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,863,015
Number of Sequences: 37544
Number of extensions: 255728
Number of successful extensions: 480
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)