Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26e19
         (705 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094928-1|AAM11281.1|  320|Drosophila melanogaster RH47744p pro...    54   3e-07
AE014298-1115|AAF46316.1|  320|Drosophila melanogaster CG2254-PA...    54   3e-07

>AY094928-1|AAM11281.1|  320|Drosophila melanogaster RH47744p
           protein.
          Length = 320

 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +2

Query: 26  HVTLIHIYPFIVNDEY-HDVKLRIPSYFGTISPVEAASSILDSVRRNYPEASVPKHXXXX 202
           +V L  IYP++++     + + R P+ F  I    AA SI+++ R+   EA++P+H    
Sbjct: 233 NVKLTTIYPYMIDTGLCKNPRYRFPNLFKLIPADVAAGSIIEAQRQGLEEAAIPRHFVAA 292

Query: 203 XXXXXXXPRRATVLIRDLLDTGVD 274
                  PR+A  L+ D  DTGVD
Sbjct: 293 EKIGRLIPRKAMRLVNDFFDTGVD 316


>AE014298-1115|AAF46316.1|  320|Drosophila melanogaster CG2254-PA
           protein.
          Length = 320

 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +2

Query: 26  HVTLIHIYPFIVNDEY-HDVKLRIPSYFGTISPVEAASSILDSVRRNYPEASVPKHXXXX 202
           +V L  IYP++++     + + R P+ F  I    AA SI+++ R+   EA++P+H    
Sbjct: 233 NVKLTTIYPYMIDTGLCKNPRYRFPNLFKLIPADVAAGSIIEAQRQGLEEAAIPRHFVAA 292

Query: 203 XXXXXXXPRRATVLIRDLLDTGVD 274
                  PR+A  L+ D  DTGVD
Sbjct: 293 EKIGRLIPRKAMRLVNDFFDTGVD 316


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,329,511
Number of Sequences: 53049
Number of extensions: 474952
Number of successful extensions: 933
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)