Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26e14
(505 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 37 0.008
03_06_0471 + 34169562-34169892,34170121-34170347 33 0.17
02_04_0382 - 22501041-22501279,22501717-22501810 32 0.23
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 1.2
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 1.6
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 29 1.6
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 2.8
01_01_0082 + 625198-625719 29 2.8
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 28 3.7
10_08_0827 + 20849312-20849833,20850352-20850417,20850786-208510... 28 4.9
02_05_0999 + 33405982-33408279,33408356-33408466,33408551-334087... 28 4.9
08_02_1289 - 25923916-25924586,25925148-25926630 27 6.5
04_03_0904 + 20717005-20718087 27 6.5
03_05_0937 - 28967038-28967245,28967348-28967556,28967584-289676... 27 6.5
02_01_0450 + 3234378-3234834,3235118-3235223,3235722-3235920,323... 27 6.5
09_02_0417 - 8915604-8916779,8916863-8917270 27 8.6
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 37.1 bits (82), Expect = 0.008
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 200 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDPPQGRPYFKPTPFPG 370
QP Y P + P V PP Y P +G P N + Y +PP GRP P P G
Sbjct: 387 QPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYG 445
Query: 371 ARG 379
A G
Sbjct: 446 AGG 448
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 221 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 370
Y P P PP Y P+ GY P GAY PP G +P + P +PG
Sbjct: 56 YPPAGGYPGAQYPPSGYPPSQGGYPP---GAY---PPSGYPQQPGYPPAGYPG 102
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 32.3 bits (70), Expect = 0.23
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 197 AQPTVGNGYEPIDNRPYIVNPPK----DYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPF 364
A+ T +G P ++ + PP D P+ + Y+P + YY DPP Y+ P P
Sbjct: 28 AEQTHDDGDNPPESPDHEDPPPSPEYYDPPPSPDYYDPPHSPDYY-DPPPSPDYYDPPPS 86
Query: 365 PGARGG 382
P GG
Sbjct: 87 PYYGGG 92
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 239 RPYIVNP---PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKP 355
+PY P P P G Y P G Y PP+G+P + P
Sbjct: 266 QPYPPKPQGQPYPPQPQGQPYPPQPYGQTYPPPPKGQPTYPP 307
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = +2
Query: 182 PDPFFAQPTVGNGYEPI-DNRPYIVNPPKDY---NPNGNGYEPIDNGAYYVDPPQGRPYF 349
P P+ QP G Y P Y P ++ P Y P G Y PQG+PY
Sbjct: 229 PQPYPPQPQ-GQTYPPQPQGETYQPQPQRETYPPQPQVQPYPPKPQGQPYPPQPQGQPY- 286
Query: 350 KPTPF 364
P P+
Sbjct: 287 PPQPY 291
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 227 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 367
P + P IV P Y P+ YEP Y +PP PY P FP
Sbjct: 636 PYPSPPDIVPSPPSYEPSPPSYEP-SPPEYAPEPPVYAPY-PPGIFP 680
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +2
Query: 203 PTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPG 370
P++ NG P+ + PP P+ NGA PP G P P PG
Sbjct: 638 PSMANGAGPVPPPIAVAPPPAPPIAGAAPPPPMANGAAAAAPPGGNPAPPAGPQPG 693
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = +2
Query: 125 PGHVNVVDNNHPGHVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPID 304
P H ++ P +DP P P + PI + P+ P P G +
Sbjct: 434 PEHPPPPESTSPPPPPTSDPPPVPPPPPTTGSFMPIPSAPFAGLPV----PAG-PMTAVP 488
Query: 305 NGAYYVDPPQGRPYFK-PTPFPGA 373
+Y V PP P P PFP A
Sbjct: 489 YNSYPVFPPMNYPMVNIPPPFPSA 512
>01_01_0082 + 625198-625719
Length = 173
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 203 PTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPF-PGARG 379
P G GY P + NP YNP +G+ N Y+ PP G Y + F P A
Sbjct: 97 PYGGGGYNPTPS----YNPTPGYNPTPSGWFTPPNMPSYLTPP-GTLYPQDPGFRPNAAA 151
Query: 380 G 382
G
Sbjct: 152 G 152
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/38 (23%), Positives = 25/38 (65%)
Frame = -1
Query: 175 DHNVTRMVIVDHVNVSRIIIIDDVHLSVGHSQQSEDEN 62
D + + + +++V ++ + +D+V +S+ ++SE+EN
Sbjct: 3900 DSSSNKQLFINNVTLTNVNSVDEVEISLSKERKSENEN 3937
>10_08_0827 +
20849312-20849833,20850352-20850417,20850786-20851082,
20851215-20851412,20851748-20851849,20851960-20852100,
20852171-20852278,20852588-20852670,20852829-20852991,
20853636-20853650,20853968-20854093
Length = 606
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = -1
Query: 328 RVHVICTVVDRFVAVSIRV-VIFGRINDVRAVVNRFVAVSYSRL-GKEWIGVIDHNVTRM 155
++ ++C +V R + V +I + D+ + V ++ G+E++ D ++ R
Sbjct: 295 KIDLLCKIVPRQIKAEKAVNIIRNTVEDLITKCKKIVDAENEQIEGEEYVNEADPSILRF 354
Query: 154 VIVDHVNVSRIIIIDDV--HLSVGH 86
++ V+ + + DD+ L GH
Sbjct: 355 LLASREEVTSVQLRDDLLSMLVAGH 379
>02_05_0999 +
33405982-33408279,33408356-33408466,33408551-33408703,
33408870-33409033,33409113-33409210,33409296-33409474,
33409588-33409675,33410285-33410451
Length = 1085
Score = 27.9 bits (59), Expect = 4.9
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Frame = +2
Query: 158 PGHVVINDPDPFFAQPTVGNGYEPIDNR---PYIVNPPKDYNPNGNGYEPIDNGAYYVDP 328
PGH ++DP F P G E D R ++ + PK + + + +DN +
Sbjct: 216 PGHYGVHDPRDFPISPRFQVGAEDFDERIPDDFVRHSPKYRHYEVHSPQHVDNLVWL--- 272
Query: 329 PQGRPYFKPTPFPGARGGK*RIS*KINNEIMY*QYISKFH 448
P G + FPG G R ++ MY S FH
Sbjct: 273 PPGAVIQQNAGFPGNLG---RPGNFLDGSSMYDHCRSPFH 309
>08_02_1289 - 25923916-25924586,25925148-25926630
Length = 717
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -1
Query: 493 ALQYVYLFIPLT*I---HMKF*NILLIHYFVINFLRYSLLPTASTRERGRLEV 344
ALQY+Y +P+ + H+K NILL F YSL+P + +L V
Sbjct: 519 ALQYLYDELPMLTVPHGHLKSSNILLNDRFEPLLTDYSLVPVMNQSHSAQLMV 571
>04_03_0904 + 20717005-20718087
Length = 360
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 254 NPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 367
NPP Y P Y+P PP +P KPTP P
Sbjct: 237 NPPPTYKPAPPTYKPQPKPN---PPPTYKPQPKPTPTP 271
>03_05_0937 -
28967038-28967245,28967348-28967556,28967584-28967644,
28967926-28968742,28968960-28971024
Length = 1119
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1
Query: 307 RCILRGPSPR-PTLLQAYPFPWCSRW 381
+ I+ PSP P + A F WCS W
Sbjct: 755 KAIIHNPSPLIPPIFGADEFGWCSEW 780
>02_01_0450 +
3234378-3234834,3235118-3235223,3235722-3235920,
3236119-3236187,3236299-3236373,3236484-3236582,
3236694-3236864,3237394-3237519
Length = 433
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -1
Query: 226 FVAVSYSRLGKEWIGVIDHNVTRMVIVDHVNVSRIIIIDDVHLSVGHSQQSED 68
F ++S S L +W+G + VT + + N II ID++ G + +
Sbjct: 186 FFSISSSDLLSKWMGESEKLVTNLFQMARENAPSIIFIDEIDSLCGQRGEGNE 238
>09_02_0417 - 8915604-8916779,8916863-8917270
Length = 527
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 242 PYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 361
PY +N P P+ Y P Y PPQ PY P P
Sbjct: 42 PYAMNFPFPPFPH---YPPYTQNLQYAVPPQYAPYTLPPP 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,298,402
Number of Sequences: 37544
Number of extensions: 319731
Number of successful extensions: 798
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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