Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26e14
(505 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 32 0.27
AL021469-3|CAA16290.2| 435|Caenorhabditis elegans Hypothetical ... 30 1.1
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 29 1.4
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 29 2.5
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 28 3.3
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 28 3.3
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 28 3.3
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 28 3.3
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z82284-1|CAB05287.1| 226|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.27
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 179 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDPPQGRPYF 349
DP+ +QPT +G G P P V PP Y P +G DNGA P G PY
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401
Query: 350 KPTPFPGARG 379
P P G
Sbjct: 402 SDVPAPYPSG 411
>AL021469-3|CAA16290.2| 435|Caenorhabditis elegans Hypothetical
protein Y116A8B.5 protein.
Length = 435
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1
Query: 220 AVSYSRLGKEWIGVIDH--NVTRMVIVDHVNVSRIIIIDDVHLSVGHSQQSEDENHEEF 50
A +S+LG G+ + N + +I ++ RII++ D ++ + ++ S DE+ +++
Sbjct: 376 ATVFSKLGDSDAGIFNRLSNFQQNIIASILHRKRIILVADKNIHIENTSSSTDEDKDDY 434
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 200 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 298
QP VGN Y+P P +PP Y GY P
Sbjct: 91 QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 200 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 298
QP VGN Y+P P +PP Y GY P
Sbjct: 62 QPLVGNSYDP----PVRFDPPYAYRATATGYMP 90
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 200 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 298
QP VGN Y+P P +PP Y GY P
Sbjct: 91 QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 226 FVAVSYSRLGKEWIGVIDHNVTRMVIVDHVNVSRIIIIDDVHLSVGHSQQSEDEN 62
F +S S L +W+G + V + V + + +I ID++ + +SE E+
Sbjct: 377 FFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSSRSESEHES 431
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +2
Query: 146 DNNHPGHVVINDPDPFFAQPT-VGNGYEPIDNRPYIVNPPK---DYNPNGNGYEPIDNGA 313
D +HP H + + PT + + P + +P+ PP+ ++ ++P G
Sbjct: 387 DISHPNHYSYDCGPNLYGFPTPYPDFHHPFNQQPH--QPPQLSQNHTSQQGSHQPGHQGQ 444
Query: 314 YYVDPPQGRPYFKPT 358
DPP RP +P+
Sbjct: 445 VPNDPPISRPVLQPS 459
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +2
Query: 146 DNNHPGHVVINDPDPFFAQPT-VGNGYEPIDNRPYIVNPPK---DYNPNGNGYEPIDNGA 313
D +HP H + + PT + + P + +P+ PP+ ++ ++P G
Sbjct: 483 DISHPNHYSYDCGPNLYGFPTPYPDFHHPFNQQPH--QPPQLSQNHTSQQGSHQPGHQGQ 540
Query: 314 YYVDPPQGRPYFKPT 358
DPP RP +P+
Sbjct: 541 VPNDPPISRPVLQPS 555
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +2
Query: 146 DNNHPGHVVINDPDPFFAQPT-VGNGYEPIDNRPYIVNPPK---DYNPNGNGYEPIDNGA 313
D +HP H + + PT + + P + +P+ PP+ ++ ++P G
Sbjct: 455 DISHPNHYSYDCGPNLYGFPTPYPDFHHPFNQQPH--QPPQLSQNHTSQQGSHQPGHQGQ 512
Query: 314 YYVDPPQGRPYFKPT 358
DPP RP +P+
Sbjct: 513 VPNDPPISRPVLQPS 527
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +2
Query: 146 DNNHPGHVVINDPDPFFAQPT-VGNGYEPIDNRPYIVNPPK---DYNPNGNGYEPIDNGA 313
D +HP H + + PT + + P + +P+ PP+ ++ ++P G
Sbjct: 387 DISHPNHYSYDCGPNLYGFPTPYPDFHHPFNQQPH--QPPQLSQNHTSQQGSHQPGHQGQ 444
Query: 314 YYVDPPQGRPYFKPT 358
DPP RP +P+
Sbjct: 445 VPNDPPISRPVLQPS 459
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 224 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 310
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
>Z82284-1|CAB05287.1| 226|Caenorhabditis elegans Hypothetical
protein T27E7.1 protein.
Length = 226
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = +2
Query: 203 PTVGNGYEPIDNRPYIVNPPKDYNPNGNGYE--PIDNGAYYVDPPQGRPYFKPT--PFPG 370
P G + P N + N P + GY P PP+G Y++P P+
Sbjct: 36 PQPGASFPP--NMNPVTNGPGSWTQKPGGYNNGPGSGSFKSTKPPRGLVYYQPKNYPYKP 93
Query: 371 ARGGK 385
+GGK
Sbjct: 94 GKGGK 98
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 221 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 361
Y+P + P P P GY P G YY QG PY+ P
Sbjct: 3 YQPYNQPPPYTQQPGYPPPGSAGYVPQ-QGGYYPQGQQG-PYYPQQP 47
>Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical
protein K02B12.2 protein.
Length = 196
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 255 ILPKITTLMETATNLSTTVHITWTLPKAD 341
I+ TT +++ T+LS + TW LPK D
Sbjct: 19 IVNHYTTHVKSTTDLSKCGNCTWVLPKLD 47
>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical protein
C27B7.4 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 284 NGYEPIDNGAYYVDPPQGRPYFKPTPFPGA 373
NGY +NG +P Q P P+ FPGA
Sbjct: 1146 NGYPNNNNGGAIGNPQQMLPPRDPSAFPGA 1175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,207,143
Number of Sequences: 27780
Number of extensions: 260937
Number of successful extensions: 707
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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