Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26e02
         (596 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0654 - 4791998-4792085,4792250-4792674                           33   0.13 
10_08_0132 + 15087274-15087797,15089544-15089732,15090048-150901...    31   0.92 
11_01_0137 - 1137979-1138257,1138419-1138970,1139052-1139409,113...    28   4.9  
08_02_1084 - 24232968-24234779                                         28   6.5  
07_03_0997 - 23203166-23203330,23203627-23203693,23203771-232038...    28   6.5  
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581...    28   6.5  

>03_01_0654 - 4791998-4792085,4792250-4792674
          Length = 170

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 20  QPKMAEAFQVAKKQDLPPPGGYKPIPF-KRIPAK 118
           +P MA    +   QD PPPGG+ P+ + +RIP K
Sbjct: 79  KPGMASVKDMPVLQDGPPPGGFAPVRYARRIPTK 112


>10_08_0132 +
           15087274-15087797,15089544-15089732,15090048-15090186,
           15090454-15090594,15091420-15091569,15091908-15092011,
           15092258-15092432,15092714-15092823,15092906-15093073,
           15093180-15093345,15093771-15094049,15094445-15094543,
           15094619-15094676,15095145-15095336,15095693-15095724,
           15096023-15096117,15096321-15096426
          Length = 908

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -2

Query: 226 LNLILKNSLVSYVIEIYRTNCHSNEPRKH 140
           L+ +LK S VSYV E + TNC  +E  +H
Sbjct: 755 LDAVLKLSEVSYVEECFSTNCQPDEFNQH 783


>11_01_0137 -
           1137979-1138257,1138419-1138970,1139052-1139409,
           1139577-1139869,1140623-1140675,1140785-1140941,
           1141666-1141683,1141846-1141929,1142005-1142064,
           1142182-1142222,1142316-1142451
          Length = 676

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/80 (21%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
 Frame = +2

Query: 170 GSIYLYNITYKRILKDEIEMRSAKM-----AIYPALLAERDRE-YLKQLRRNRDAEAELM 331
           GS  L+++ YK ++KD I  R         A YP++   +++E + ++L++N      ++
Sbjct: 210 GSYCLWSVEYKEVMKDFIVKRLKDQLFMARAHYPSIAKLKNQETFTRELKQNIQEHERML 269

Query: 332 RD-VPGWEVGTYYGERVYKL 388
            D +   ++  ++ +++ K+
Sbjct: 270 SDTIADADLPPFFAKKLEKM 289


>08_02_1084 - 24232968-24234779
          Length = 603

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 269 ERDREYLKQLRRNRDAEAELMRD 337
           ERDR+Y ++  R+RD E E  RD
Sbjct: 515 ERDRDYDRERERDRDRERERDRD 537


>07_03_0997 -
           23203166-23203330,23203627-23203693,23203771-23203862,
           23204820-23204956,23205050-23205116,23205212-23205278,
           23205356-23205441,23206061-23206153,23206337-23206522,
           23207316-23207372,23207455-23207582,23207662-23207731,
           23207815-23207950,23208378-23208529,23208606-23208680,
           23208765-23208929,23209063-23209128,23209229-23209333,
           23209929-23210132,23210462-23211715
          Length = 1123

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 227 MRSAKMAIYPALLAERDREYLKQL 298
           +RSAK+A+   L   RD  Y+KQL
Sbjct: 748 LRSAKLAVEKGLAQGRDESYVKQL 771


>01_06_0575 -
           30357556-30357582,30357698-30357944,30358039-30358161,
           30358275-30358301,30358475-30358633,30359764-30359948,
           30360225-30360293,30360432-30362354,30363018-30363339,
           30363506-30363543
          Length = 1039

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 366 TENASTNLFPPTSWSNQSSKSTMHTVTSKSGT 461
           +EN S  L PP+  S Q+S ST+  +  K GT
Sbjct: 290 SENVSLKLIPPSDMSVQTS-STLKDLVKKEGT 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,692,571
Number of Sequences: 37544
Number of extensions: 336594
Number of successful extensions: 1015
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)