Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26e01
(701 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 77 2e-14
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 75 7e-14
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 71 1e-12
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 59 3e-09
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 42 5e-04
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 40 0.001
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 38 0.006
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 38 0.010
03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998... 37 0.013
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 37 0.018
08_02_1613 + 28236989-28238593 34 0.095
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 33 0.17
03_06_0437 - 33912326-33912520,33912870-33912998,33913147-339133... 33 0.17
12_01_0209 - 1583401-1583498,1583879-1583922,1584285-1584373,158... 32 0.38
11_01_0208 - 1628020-1628117,1628282-1628325,1628790-1628878,162... 32 0.38
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 32 0.38
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159... 32 0.51
11_01_0209 - 1642473-1642579,1642783-1642826,1642935-1643023,164... 32 0.51
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 32 0.51
01_06_0127 - 26718452-26718989,26719082-26720211 30 1.5
11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162... 30 2.0
03_01_0256 - 1992298-1993878 30 2.0
10_08_0182 + 15513693-15515273 29 2.7
05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688... 29 2.7
02_02_0424 + 10074206-10074287,10074389-10074485,10074584-100746... 29 2.7
03_02_0024 + 5079690-5081351 29 3.6
01_01_0161 - 1385408-1385566,1385815-1385943,1386164-1386322,138... 29 3.6
10_01_0172 - 1928648-1930751,1932019-1932243,1933709-1934676 29 4.7
01_06_1620 + 38697960-38698131,38698532-38700732 29 4.7
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 28 6.2
06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247 28 6.2
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 76.6 bits (180), Expect = 2e-14
Identities = 30/84 (35%), Positives = 57/84 (67%)
Frame = +3
Query: 402 ERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIF 581
+ A+ G+G+F +LA G+ SE M+++ +SF+ S Q + +L+ Q + + S++F
Sbjct: 35 DEALISMGFGKFQAFVLAYSGMAKISEAMEMMLLSFVGQSVQAEWELSAQAESLITSVVF 94
Query: 582 IGMMVGAYAWGSVADSLGRKRVLI 653
+GM+VGAY+WG V+D+ GR++ ++
Sbjct: 95 VGMLVGAYSWGIVSDNYGRRQAVM 118
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 74.5 bits (175), Expect = 7e-14
Identities = 29/80 (36%), Positives = 56/80 (70%)
Frame = +3
Query: 408 AIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIG 587
A+ +G+GR+ ++L+ G+ +E M+++ +SF+ PS Q + LT+ + + SI+F+G
Sbjct: 15 ALLSSGFGRYQILILSYAGVGLIAEAMEMMLLSFVGPSVQLEWKLTSHQESMITSIVFVG 74
Query: 588 MMVGAYAWGSVADSLGRKRV 647
M++GAY WG V+D+ GR+++
Sbjct: 75 MLIGAYTWGVVSDNYGRRQL 94
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/107 (29%), Positives = 63/107 (58%)
Frame = +3
Query: 381 NSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKG 560
N E + A+E G+G+F ++LA G+ E M+++ +SF+ P + + +++ + +
Sbjct: 195 NMETYTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENES 254
Query: 561 WLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFS 701
L+S++F GM++GA WG V+D GR+ L+ ++ + S+FS
Sbjct: 255 LLSSVVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFS 301
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/100 (27%), Positives = 57/100 (57%)
Frame = +3
Query: 360 SDPEKGSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLD 539
++ E+ E + A+ G+GRF ++LA + +E M+V+ +SF+ PS + +
Sbjct: 6 AEEEEEEEEETYTTDDALTRAGFGRFQALVLAYACVGWVAEAMEVMLLSFVGPSVKAEWG 65
Query: 540 LTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAI 659
++ +G ++S++F GM++GA G ++D GR ++ +
Sbjct: 66 VSGAAEGLVSSVVFAGMLIGACLGGLISDRYGRSFLIATL 105
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 531 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFS 701
DLDLT S+ +G MVGA A G +A+ +GRK L+ +I N + +A SF+
Sbjct: 93 DLDLTLSEFSVFGSLSNVGAMVGAIASGQMAEYIGRKGSLMIAAIPNIIGWLAISFA 149
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3
Query: 531 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFS 701
DL LT S+ +G MVGA A G +A+ +GRK L+ +I N + +A SF+
Sbjct: 93 DLGLTLSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLAISFA 149
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +3
Query: 531 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFS 701
DL L+ S+ +G MVGA A G +A+ +GRK LI ++ N + +A SF+
Sbjct: 94 DLKLSISEFSAFGSLSNVGAMVGAIASGQMAEYIGRKGSLIIAAVPNIIGWLAISFA 150
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 531 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIV 668
D L+ G S++ IG M+GA G +ADSLGRK + +I+
Sbjct: 1019 DFGLSNSEYGVFGSVLTIGAMIGALTSGRLADSLGRKTTMGLAAII 1064
>03_03_0040 -
13999040-13999179,13999524-13999638,13999759-13999818,
14000007-14000060,14000274-14000333,14000418-14000480,
14000552-14000595,14000671-14000755,14000904-14001028,
14001368-14001432,14001460-14001518,14001678-14001743,
14001870-14001935,14002019-14002105,14002168-14002257,
14002378-14002440,14003153-14003419
Length = 502
Score = 37.1 bits (82), Expect = 0.013
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 2/132 (1%)
Frame = +3
Query: 303 GPGSKTAELGVVPSVKKSKSDPEKGSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSE 482
G G TA L ++ K+ + D EK N D G G ++L+ V S
Sbjct: 26 GGGEVTAPL-LLRQHKQGRGDEEKIQNDAGGDGGGRRGGGGGGSMSMLMLSTAVAVCGSF 84
Query: 483 EMDV-ISMSFILPSAQCD-LDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIA 656
E + S S D + L+ S++ IG M+GA G +AD LGRK V
Sbjct: 85 EFGTCVGYSAPTQSGIVDEVGLSISQFALFGSVLTIGAMIGAVTSGRLADFLGRKMVCHI 144
Query: 657 ISIVNALAIVAS 692
+ + I A+
Sbjct: 145 FRLSQTMRISAT 156
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +3
Query: 444 MLLAVCGLVSTSEEMDVISMSFILPSAQC---DLDLTTQTKGWLNSIIFIGMMVGAYAWG 614
M++A G+ + +S+ + P+ DL L+ SII IG M+GA A G
Sbjct: 23 MVIASTGVAVLGSFVFGVSIGYSAPTQSKIREDLQLSLSEYSVFGSIITIGAMIGAVASG 82
Query: 615 SVADSLGRKRVLIAISIVNALAI 683
+AD GRK V + I+ + A+
Sbjct: 83 HLADISGRKGVPVFIAEIAPKAL 105
>08_02_1613 + 28236989-28238593
Length = 534
Score = 34.3 bits (75), Expect = 0.095
Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +3
Query: 375 GSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFI----------LPSA 524
G ++ + A+++ +H+ + V G+ ++ D+ +S + + +
Sbjct: 5 GGEQQQLEVLHALDVAKTQWYHFTAIVVAGMGFFTDAYDLFCISLVTKLLGRIYYRVDGS 64
Query: 525 QCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFS 701
L +N + F+G + G +G + D LGRKRV ++ L +AS+ S
Sbjct: 65 PSPGTLPPHVSASVNGVAFVGTLSGQLFFGWLGDKLGRKRVYGITLMLMVLCSLASALS 123
>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
Length = 508
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +3
Query: 408 AIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFI---LPSAQCDLDLTTQTKGWLNSII 578
A+++ +H++ + + G+ ++ D+ S+S + L +L + I
Sbjct: 12 ALDIARTQLYHFIAIVIAGMGFFTDAYDLFSISLVADLLGHVYYHGELPRNIHAAVTGIA 71
Query: 579 FIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFS 701
G + G +G + D +GRKRV ++ ++ +AS S
Sbjct: 72 LCGTVPGQLVFGWLGDKMGRKRVYGITLLLMVVSSLASGLS 112
>03_06_0437 -
33912326-33912520,33912870-33912998,33913147-33913317,
33913877-33913993,33914150-33914800
Length = 420
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 628 ESATEPQAYAPTIIPMKIILFSHPLV*VVRSKSHCAEGR--MNDIEMTSISSEVLTRP 461
E PQ P I+LF P++ VR++ + E D++M I VLTRP
Sbjct: 210 EEDVPPQEVYPEGTQFMILLFERPIIYDVRARPNLVESTSGSRDLQMVKIGLRVLTRP 267
>12_01_0209 -
1583401-1583498,1583879-1583922,1584285-1584373,
1584911-1585018,1585158-1585243,1585385-1585472,
1585970-1586140,1586379-1586454,1586534-1586583,
1586692-1586754,1586839-1586892,1587038-1587140,
1587265-1587367,1587479-1587569,1587629-1587669,
1587801-1587879
Length = 447
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +3
Query: 558 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVLI----AISIVNAL 677
G+L + IG + WG VAD +GRK V+I A+ ++N L
Sbjct: 68 GFLGASYMIGRGFASILWGMVADRIGRKPVIIFSIFAVIVLNTL 111
>11_01_0208 -
1628020-1628117,1628282-1628325,1628790-1628878,
1628986-1629030,1629397-1629504,1629650-1629735,
1629870-1629957,1630275-1630445,1630718-1630793,
1630877-1630926,1631035-1631097,1631201-1631254,
1631398-1631500,1631626-1631728,1632038-1632098,
1632186-1632226,1632375-1632453
Length = 452
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +3
Query: 558 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVLI----AISIVNAL 677
G+L + IG + WG VAD +GRK V+I A+ ++N L
Sbjct: 58 GFLGASYMIGRGFASILWGMVADRIGRKPVIIFSIFAVIVLNTL 101
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 558 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNAL 677
G++ + F+G + A WG AD GRK ++ ISI++ +
Sbjct: 87 GFVGATYFLGRTISAVPWGIFADKYGRKPCIV-ISILSVI 125
>12_01_0210 -
1593732-1593823,1594730-1594773,1594895-1594983,
1595076-1595120,1595457-1595564,1595647-1595732,
1595872-1595959,1596159-1596335,1596531-1596606,
1596709-1596758,1596834-1596896,1597152-1597254,
1597337-1597439,1597559-1597619,1598119-1598159,
1599790-1599961
Length = 465
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 558 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVLI 653
G+L + +G A WG VAD +GRK V++
Sbjct: 89 GFLGASYMVGRSFAAIFWGVVADRIGRKPVIV 120
>11_01_0209 -
1642473-1642579,1642783-1642826,1642935-1643023,
1643114-1643158,1643484-1643591,1643691-1643776,
1643917-1644004,1644211-1644387,1644720-1644795,
1644898-1644947,1645030-1645092,1645332-1645434,
1645513-1645615,1645731-1645791,1646268-1646308,
1646792-1646825
Length = 424
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 513 LPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLI 653
L AQ + D+ G+L + +G A WG VAD +GRK V++
Sbjct: 29 LQVAQTEEDIGNYA-GFLGASYMVGRSFAAIFWGVVADRIGRKPVIM 74
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +3
Query: 558 GWLNSIIFIGMMVGAYAWGSVADSLGRKRV----LIAISIVNALAIVASSF 698
G++ + G + + WG VAD GRK + LI+I I N L ++SS+
Sbjct: 139 GFVGASYMFGRALSSVIWGIVADKYGRKPIIIITLISIIIFNTLFGLSSSY 189
>01_06_0127 - 26718452-26718989,26719082-26720211
Length = 555
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Frame = +3
Query: 405 RAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSII-- 578
+AI + G G F C +ST ++ + + P D +K N +I
Sbjct: 27 KAIVIAGMGFFTDAYDLFC--ISTVSKL--LGRLYYQPDGSTDSKPGALSKTANNMVIGV 82
Query: 579 -FIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFS 701
+G ++G +G D LGRKRV I+ A + S S
Sbjct: 83 ALVGTLMGQLVFGYFGDKLGRKRVYGVTLILMAACAIGSGLS 124
>11_01_0207 -
1620192-1620280,1620408-1620451,1620703-1620791,
1620870-1620914,1621441-1621548,1621638-1621723,
1622202-1622289,1622403-1622576,1623084-1623159,
1623256-1623305,1623392-1623454,1623689-1623791,
1623871-1623973,1624679-1624739,1624864-1624904,
1625076-1625154
Length = 432
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 558 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNAL 677
G+L + IG + WG VAD +GRK + I SI++ +
Sbjct: 58 GFLGASYMIGRCFASLFWGVVADRIGRKPI-IKFSILSVV 96
>03_01_0256 - 1992298-1993878
Length = 526
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 564 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFS 701
+N + F+G + G +G + D +GRK V ++ + VAS S
Sbjct: 73 VNGVAFVGTLTGQLFFGWLGDRVGRKSVYGMTLLLMIICSVASGLS 118
>10_08_0182 + 15513693-15515273
Length = 526
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Frame = +3
Query: 435 FHYMLLAVCGLVSTSEEMDVISMSFI--LPSAQCDLDLTTQTKGWL--------NSIIFI 584
+H+M + + G+ ++ D+ +S + L DL G L N +
Sbjct: 20 YHFMAIVIAGMGFFTDAYDLFCISLVSKLLGRIYYTDLAGDNPGSLPPNVSAAVNGVALC 79
Query: 585 GMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFS 701
G + G +G + D LGRK V ++ + VAS S
Sbjct: 80 GTLAGQLFFGWLGDKLGRKSVYGFTLVLMVVCSVASGLS 118
>05_06_0191 -
26265460-26267016,26267858-26268356,26268789-26268859,
26269079-26269515,26269626-26269681,26269682-26270479,
26270918-26270973
Length = 1157
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 439 TTCCWQYAVSSALPRRWTSSRCRSSYPRHSA 531
T CCW + AL R WT R RS H A
Sbjct: 538 TPCCWYFLWLVALNRCWTVYRLRSRGISHPA 568
>02_02_0424 +
10074206-10074287,10074389-10074485,10074584-10074651,
10074727-10074859,10075102-10075137,10076109-10076208,
10076312-10076424,10076511-10076604,10077301-10077454,
10077563-10077706,10077802-10077875,10077949-10078037,
10078311-10078365,10078563-10078616
Length = 430
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 513 LPSAQCDLDLTTQT--KGWLNSIIFIGMMVGAYAWGSVADSLGRKRV--LIAISIVNALA 680
L S DL T +G + SI G VG GS+AD +GR+R L A+ ++ A
Sbjct: 66 LESISTDLGFAGNTLAEGLVVSICLGGAFVGCLFSGSIADGIGRRRAFQLSALPMIIGAA 125
Query: 681 I 683
+
Sbjct: 126 V 126
>03_02_0024 + 5079690-5081351
Length = 553
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 480 EEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAI 659
+ D+ MS + DL+++ L II I +VG+ A G +D +GR+ ++
Sbjct: 71 DRADISVMSGAQKFMKKDLNISDAKVEVLAGIINIYSLVGSLAAGRTSDWIGRRYTMVLA 130
Query: 660 SIV 668
S++
Sbjct: 131 SVI 133
>01_01_0161 -
1385408-1385566,1385815-1385943,1386164-1386322,
1387228-1387571,1387641-1387905,1387998-1388075,
1388207-1388260,1389341-1389361,1389453-1389578,
1389696-1389863,1389923-1390313,1390629-1390710,
1391175-1391536,1391806-1392630,1392956-1393476
Length = 1227
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 461 RSRQHFRGDGRHLDVVHPTLGTVRLRPHHSD*RMA---KQYNLHR 586
RS H + D H T+GT R+ PHHS R+A +Y HR
Sbjct: 826 RSYAHVQVDSPGTATRH-TVGTTRITPHHSRDRLATVRDEYPTHR 869
>10_01_0172 - 1928648-1930751,1932019-1932243,1933709-1934676
Length = 1098
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 101 LTNNKEEAHQIVTGKLYAVGS-ATPPSERRLSVPATTIQSR 220
LT+NKE + IVT + AVGS P + L P + + R
Sbjct: 421 LTDNKERSRIIVTSRFQAVGSTCCRPENKDLLYPISFLSPR 461
>01_06_1620 + 38697960-38698131,38698532-38700732
Length = 790
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +3
Query: 462 GLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRK 641
GL++ + M +S S + + +L + + K W+ II G+++ + S+ LGR+
Sbjct: 414 GLINLQDNMGELSNSIFIRLSASELPQSGKMKWWIVGIIIGGLVLSSGV--SILYFLGRR 471
Query: 642 RVL 650
R +
Sbjct: 472 RTI 474
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 385 ELEPFSGSDFDFLTEGTTPSSAVLEPGPF 299
E+ P SGS F+FLTE T S PG +
Sbjct: 354 EMMPVSGSPFNFLTETTIGSRIDQVPGGY 382
>06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247
Length = 974
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 591 MVGAYAWGSVADSLGRKR--VLIAISIVNALAIVASSFS 701
+VGAYA G+ L K VL+AI + A+ +V +SFS
Sbjct: 121 LVGAYAAGTSRGVLKAKNACVLVAIFVYMAVQVVLTSFS 159
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,793,452
Number of Sequences: 37544
Number of extensions: 533283
Number of successful extensions: 1626
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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